Hamb016475.1
Basic Information
- Insect
- Hoplodrina ambigua
- Gene Symbol
- Trm1
- Assembly
- GCA_949774945.1
- Location
- OX458979.1:12513044-12528537[-]
Transcription Factor Domain
- TF Family
- NCU-G1
- Domain
- NCU-G1 domain
- PFAM
- PF15065
- TF Group
- Unclassified Structure
- Description
- NCU-G1 is a set of highly conserved nuclear proteins rich in proline with a molecular weight of approximately 44 kDa. Especially high levels are detected in human prostate, liver and kidney. NCU-G1 is a dual-function family capable of functioning as a transcription factor as well as a nuclear receptor co-activator by stimulating the transcriptional activity of peroxisome proliferator-activated receptor-alpha (PPAR-alpha) [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3e-98 8.4e-94 315.0 0.1 1 352 567 907 567 908 0.92
Sequence Information
- Coding Sequence
- ATGAATGTAACGAAGTATCGTAGAGTAGCTACAATTATTACCcagAGAATTATTAAAATGGATGCTGCTACAAAACACACGTCTATAAAAGAAGGGAAAGCTGAAATACTTCTCAAAACTGACCAAGTTTTTTATAACCCAGTGCAAGAGTTCAACAGAGATTTAAGTATAGCTGTGCTTACTATATTTACCAATGATTACAAAGCCGAGCAACTTGTTAAAGCAGAAAAGTTCGTTAGAGAGagtaaatataaagaaaaaatggaTACTgagGTAGAAATATCAATACTAGAAGCTCTATCTGCAACAGGACTCAGAAGCATCCGGTATGCTAAAGAAGTGCCAAATATAACAAAGATTGTTGCTAATGACCTGTCAGAGAAAGCAGTAGACACTATCAGGGCTAATGTTGTGCATAATGATGTCAGTAATTTGATTGAGACCAGTCATGATGATGCTTGCATGCTTATgtacaaacacaaacaatacTGGAAGCGTTTTGTTGCAATAGACCTGGACCCTTACGGCTGTCCCTCTGTATTCCTTGATGCAGCAGTCCAGAGTGTGCAGGAAGGAGGTCTACTGCTTATAACTGCTACAGACATGGCAGTGTTGGCAGGAAACACTCCGGAAACATGTTACAGTAAATACGGAGCTGTTAGTTTGAAGACTAAGTGCTGTCATGAAATGGCTCTAAGGATACTGCTACAGTGCATAGAATCACACGCCAACCGCTACAGCCGCTACATAGTGCCTCTGCTCAGTATATCCGCAGACTTCTACATTCGAGTGTTCGTGAGGGTCTACACTGGAGCCATTCACTGTAAGAATACTACTAGTAAGCTGTCCATGGTGTACCAGTGTACTGGTTGCGATAACATAACCCTGCAACCGATGGGTGGCTTCAAACCTAACCCCACAGAGAAGAACCCGGCACAAATGAAAGCCTACTTGCCTACAGCGCCACCTGTTGGAGAGTTTTGCGTTAATTGTCACCAGAGGCATCATCTTGGGGGCCCGATCTGGTCAGCTCCTATCCACGACGAAATCTTCGTGACCCGCGTCCTTACCCACGTGGAACATAACCCCGAGCTCTTCGGAACAGCCAAGCGAATAGCTGGAGTACTGGCCATGGTTAGGGAGGAGTTGCAAGACGTTCCTCTGTACTATACCATGGACAAACTATTCGGGAGGGTCCATTTGGAGACTATGCCAATGTTGGTTATGAGGTCAGCACTACTGAACTCCGGGTACAAAGTGTCATACTCTCACGCGTCGCGGATGTCCATAAAGACAGCTGCACCCTCACAACTGGTGTGGGACATCATCAGGACGTGGGAGAAGACACATCCAGCCAAACCTGCCAAacTAGCAGCAGATCCGGTAGCGCGGTACATTCTGTCACAAGAGATCAAAACGCAAAATATTGACCTTAGTCCCCGTGGCGACGCCAATCCCATCAGCCGCCGCGACGGTAGGCTGCGGTTCCAGTACAATCCCACTCCTCACTGGGGACCCGGCTCCAGGGCTGCTGTCAACGTAGGAGACGAGAAGATGACCAAGGCGCTGAAGAATCAAAATAAACACTCTAAAGATAAAAAGAACGACAAACGACAACACTCACCAAGTGATGacgaagagagaaagaaaACAAGCTCTGAGCTGAATCCAGGATGTAAAAACTGTGGGTCAAGCATTACCCTCGTGTACATCAGAGCAAATGGCACCCATGACACCGTCCACCAGCTATGGGATTTCACAAGAGGCATGCCCACAGTCATCTACGCAATCACCAATCTGAACTCTGCACTAAATATAACATGGTTTAAGGAGAAACCTGTTGAGTTTCGGTTTACGGAAAAACCGCTGTACAGTTTTGCTGCTACAATTGATaagCTAGAAGAATACAATGACATTGAGAACAACGGTCACATCGACAACAAGTGCCCACAGAGGGCGCTGCCGCTGCGTTACGTGGTGTGGAAACGCTCCGAAAGCGTGTTGAAAAATGGTACAGAAGCCATGCTGCACATGCGCGGCCACTTCGACGATGAGAGGCAAAGAGGCGTTCTTGATATGAAACTGGACTTCCTCCCGTTCCAAGACTACGCGGTGAACCTCCCCCACCTCATCCACACAGCCAACTCGACGTTGATCGACGTCAGCCTCGTCAACCTGACGACGTCAAGCGACTACAACGCGTCAAGGTTCGCGATACACTTCACGATGGTCAGCACCGACATGAAGAACGATACCATGACTTGTGAAATGAGGAAGAGCTTGGATGATGAACATACTCCTGGTGTTTTTGAGATATTTGAGATAAGAACTCCGAAGTCCAGTCGGTCAGACGACGGCGGCTTCATGCAGTTCCGGCCGGTGTGCTACACGGAGGCAGAGCGCAGCGTGTCCTCTTCCACCAACGCCTACGTGACGAACTTTACCAACTCATCTCGTCTGGTGGGTACGTTGATTGACTTCTACCGCGACTATGACCGTGACAATTTACTCATTCAGGATATGTTCATATCGTTCGGTCTGCCCGGGGACGGTTTCTACAGACAATACAACTATACTTCTTGGTCATACACGTTAGGCTACGGAGTGCCTCCTGTCGAGAACGTGTCACTGttcgtcatcatcatcgtaTCCATCGGGCTGGGCGTGCCCGTGCTGCTGGCGCTGTCCGGCATCACGTACGTGCTGCTGCGGCGGTGCAAGCAGAGGAACCCGCCCGCCCGCTTCACGGACGACGAATAG
- Protein Sequence
- MNVTKYRRVATIITQRIIKMDAATKHTSIKEGKAEILLKTDQVFYNPVQEFNRDLSIAVLTIFTNDYKAEQLVKAEKFVRESKYKEKMDTEVEISILEALSATGLRSIRYAKEVPNITKIVANDLSEKAVDTIRANVVHNDVSNLIETSHDDACMLMYKHKQYWKRFVAIDLDPYGCPSVFLDAAVQSVQEGGLLLITATDMAVLAGNTPETCYSKYGAVSLKTKCCHEMALRILLQCIESHANRYSRYIVPLLSISADFYIRVFVRVYTGAIHCKNTTSKLSMVYQCTGCDNITLQPMGGFKPNPTEKNPAQMKAYLPTAPPVGEFCVNCHQRHHLGGPIWSAPIHDEIFVTRVLTHVEHNPELFGTAKRIAGVLAMVREELQDVPLYYTMDKLFGRVHLETMPMLVMRSALLNSGYKVSYSHASRMSIKTAAPSQLVWDIIRTWEKTHPAKPAKLAADPVARYILSQEIKTQNIDLSPRGDANPISRRDGRLRFQYNPTPHWGPGSRAAVNVGDEKMTKALKNQNKHSKDKKNDKRQHSPSDDEERKKTSSELNPGCKNCGSSITLVYIRANGTHDTVHQLWDFTRGMPTVIYAITNLNSALNITWFKEKPVEFRFTEKPLYSFAATIDKLEEYNDIENNGHIDNKCPQRALPLRYVVWKRSESVLKNGTEAMLHMRGHFDDERQRGVLDMKLDFLPFQDYAVNLPHLIHTANSTLIDVSLVNLTTSSDYNASRFAIHFTMVSTDMKNDTMTCEMRKSLDDEHTPGVFEIFEIRTPKSSRSDDGGFMQFRPVCYTEAERSVSSSTNAYVTNFTNSSRLVGTLIDFYRDYDRDNLLIQDMFISFGLPGDGFYRQYNYTSWSYTLGYGVPPVENVSLFVIIIVSIGLGVPVLLALSGITYVLLRRCKQRNPPARFTDDE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00810101;
- 90% Identity
- iTF_00810101;
- 80% Identity
- -