Hamb008643.1
Basic Information
- Insect
- Hoplodrina ambigua
- Gene Symbol
- CSRNP3
- Assembly
- GCA_949774945.1
- Location
- OX458969.1:4543343-4545583[+]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.009 2.5e+02 2.0 1.9 39 112 20 91 12 101 0.72 2 5 0.15 4e+03 -1.9 0.4 82 108 166 192 156 208 0.39 3 5 1.3e-102 3.6e-98 328.4 6.3 1 218 220 429 220 429 0.93 4 5 0.2 5.5e+03 -2.4 0.0 60 91 432 463 428 485 0.48 5 5 1 2.8e+04 -4.7 4.0 80 80 701 701 625 739 0.57
Sequence Information
- Coding Sequence
- ATGGAGGACGCAATATCACAATTAGGCGCACAGCCACAGGACCATCTCGACAAGGACGCAACTGAATGTGATAAATACCCAATTGGAGAGCACAGGGAGGAAGATGGTTTCCTTGCGATAAAAGACGAGAAAAGCAGAGACAGTGATGCTCACAGCGAAGATCTTAGCTCTAATGATGATCAAAGTAATGTAATCAGTAGTAGTAACTCTCAGTTTTATGAGAGCAGTGACAGTAAGATAGACTATGCGGTAAAAATAGATGATAATGATACTCTAAGTGACATAGACGATATCAAAACTGACAGTGCTTCAGCTGACAGTGAGGATTCTGCACTTGGTAGTCTTCCACCAGATAGTGGTCTCAATGATAGGGAAGATGAAGCTCAAGATCGATCAGAAGGTAGTGACTCAGGTCTAGGTTCAGAAGTCATCGACGATGTAAAAATACCAAGCTTCAACCTTGCTCTTCCATGCACAAGTAGCCTAAAAAGTGACAAATCATCAGATGATATAGACCACGATAACGATAACTCCAGCGATAGCAGTAATGAGAACAATGTAGATGATGGCCATAATTCAATAGCACAAGTTAAGCCTCTCAGAAGTAGTCTTAAGAGAAAATGTAGTGATGATAACGAAAATGAGCCACAAACTAAAAAGCGGAAAGAAAGTATAAAATTCGATAATGTTACTGTATTTTACTTTCCTAGAGCACAAGGATTTTCATGTGTTCCATCACAAGGAGGTTCAACGTTAGGAATGGAATGGGAACATACTCATATACAAAACTTTACTTTAGCTGAGCATGCCTTAGAGCAGAGAAGATTACATAGACAAATATTGCAACAGCTGAAGAGTGAGCGTCATTCGCTACAAGGCGTGTCACTTTCCTCCAGCGAAGATAGTGACACCGAAGAAGAAGCGAGCGACATTTCTGAATCTGAGCTAGATTTAGATAGTTATTTTTTCTTGCAACCTGTTCCAACCAGACAAAGAAGAGCACTATTGCGCGCAGCAGGAGTGAGAAAGATAGAGGGTTATGAAAAAGATGAATGTAGAGACATAAGAACATCGCGTGAATTTTGTGGTTGCGCTTGCAAGGGCGCTTGTAACCCAGAAAGTTGCTCGTGCAGCTTAGCTGGGATAAAATGTCAAGTCGATCGATTGAATTTCCCCTGTGGGTGCACTAGAGATGGGTGCGCCAACACAACGGGCCGAATAGAATTCAATCCTGTAAGGGTGAGGACGCATTTTATTCAGACTCTTATGAGAATAGGTCTTGAAAAGAAACATGAAGAGAATCAAGAAGCTGCAAAGAGACAGTGGTTGGAGGCGCACAATAATTCTACATCATGTTCATCAAATTCGTCATATGAAAGAGAGCGTTGTCTTAGTCATGAAGATGGAATGTTACGTGATGTTAACCTTACTCCAAGAGTGGAAGTTGAATCTTGCGTCAATACGGGAAGTTTTAATAATGTTCATTGTGATATGAATAATTCCACATCACAGAATAGTGACATGTCATACGGCTATAGAAACGAGGCTGCCAATCACAATAATGTAAATGACAGTGGTATCATGCAGTTTGAGAATACAAACAATCTTCACAGCCACAGTGACCTTTACACATCCAGCTTACTTCAAGGCAAGGGCCCACCATACGCACCAGCCAATGCCATGGGTTTTGATACTATGTCAAATAACATACAACGATTTCCATGCAATCTTAACTACGCTTACGAGCAGCAAACAGAAAACCATTTCAAAGGCCTGCAAAGCTTCTCCGCCACCAGTTTTGAAGAATTTGCGCACAGCTCCCAAATGACAATGTTTAGTCATTATGGTCATGTTTATGTACCAGACTACTTGCATAAATCAACTACAAATGTACACGACCACAATTCGCTACAATATCATAGTACGCAGCATAATCACTATGGCATGTACAAAAACAGTTCTGATTGTGTAAATAATGACAACAAAAGTGATACTCATTATACCACTTTGATGACATTGCCATATCAACCTAGTAATAAGATGCAAACTGTAGAAAATGATGAGAACTGGTTCAGTCACAATACGCTGCTGAACTTGGATCACTCTGACCAGACGACCCAGGACGCGTCGGACTCGCAGTCACAGTCTGCGGAGACAGCAACAGAAAGCAATAATGCCGAGACTACGGAAAATTTTGGtgaacttattaaaaaaactatggTAGAGTCTGTTACTGTGTAG
- Protein Sequence
- MEDAISQLGAQPQDHLDKDATECDKYPIGEHREEDGFLAIKDEKSRDSDAHSEDLSSNDDQSNVISSSNSQFYESSDSKIDYAVKIDDNDTLSDIDDIKTDSASADSEDSALGSLPPDSGLNDREDEAQDRSEGSDSGLGSEVIDDVKIPSFNLALPCTSSLKSDKSSDDIDHDNDNSSDSSNENNVDDGHNSIAQVKPLRSSLKRKCSDDNENEPQTKKRKESIKFDNVTVFYFPRAQGFSCVPSQGGSTLGMEWEHTHIQNFTLAEHALEQRRLHRQILQQLKSERHSLQGVSLSSSEDSDTEEEASDISESELDLDSYFFLQPVPTRQRRALLRAAGVRKIEGYEKDECRDIRTSREFCGCACKGACNPESCSCSLAGIKCQVDRLNFPCGCTRDGCANTTGRIEFNPVRVRTHFIQTLMRIGLEKKHEENQEAAKRQWLEAHNNSTSCSSNSSYERERCLSHEDGMLRDVNLTPRVEVESCVNTGSFNNVHCDMNNSTSQNSDMSYGYRNEAANHNNVNDSGIMQFENTNNLHSHSDLYTSSLLQGKGPPYAPANAMGFDTMSNNIQRFPCNLNYAYEQQTENHFKGLQSFSATSFEEFAHSSQMTMFSHYGHVYVPDYLHKSTTNVHDHNSLQYHSTQHNHYGMYKNSSDCVNNDNKSDTHYTTLMTLPYQPSNKMQTVENDENWFSHNTLLNLDHSDQTTQDASDSQSQSAETATESNNAETTENFGELIKKTMVESVTV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00040832;
- 90% Identity
- iTF_00122412;
- 80% Identity
- -