Hamb019030.3
Basic Information
- Insect
- Hoplodrina ambigua
- Gene Symbol
- SMARCC2
- Assembly
- GCA_949774945.1
- Location
- OX458983.1:6056133-6066828[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.3e-14 1.3e-11 45.0 0.1 4 44 528 568 525 570 0.95
Sequence Information
- Coding Sequence
- ATGAAAGCCTTCATGGACATGAAACCGGGCGGCTCCCTGTGCACGGTGCTCGCCACCATGTTCCGTTTCAAGTCGGAGCAACGGTGGCGCAAGTTCGACTTCCAGGTCGGTAAGAACCCCTCCCGCAAGGACCTGAACGTGCAAATGATGATGGAGATCGAGTCCTCGCTGCTTGGCGCCGAAGTCATTCGATCGCCGTGCGTGTTCATTCGGCCGGAGGTCGATAAGGCGACTGCGAACAAAGTCAAGGATATCGTTGTCAATCATCAGGGGGAGATATGCGAAGACGAAGAGGAAGCGACGCACATCGTGTACCCGACGGTGGATCCGCTAGAGGAGGAGTACGCGCGGCCGGTGTTCCGCCGCGCCAACCACGTGCTGGTGCACTGGTACTACCTGCCGGACAGCCACGACACGTGGGCGCAGGCTGAGCTGCCGGTGGACGTGCCAGAGACAGTGAGCTGGGACTGCAACCGCGCAGAGCCGTGGCGCGTGTCGGCGTCGTGGGCGCTCGACCTGCCGCAGTACAACGAGTGGATGAACGAGGAGGACTACGAGCTCGACGCTAACGGCAAGAAGAAGGTCCACAAATTGCGTCTATCAGTGGATGATCTGATCCCGGGCAGCGAGCCGTCCAGCAAGTCCAAGAAGGGCAGCAAGAGAAAGCGTTCGCCCTCTCCACCGCCGCAGAAACATGGCAAGAGGAAGAGCCGTATAACCAAACGTCGGGAAAACGACGTGGATGAAGAAGAGGACAACGCGTCCAGAGACAACACTGATGCTGCGCCCACGCCGGAGAGCGAACGGGCTGCTGAACTACATAACCGGCATGACAATAATATAATGTACCGTTGCACAGCGGCGGCTCCGGCGAGCGAAGCGCCCGCGCCCAGCGACGCGCCCGCCACGCCCGCACCCCCGCCCGACGCACACGACGACGACCAGGCCAAGCACAGCGACTCTAACACGCAGGAAATGCTAACTAAAGAGGAGTTGGAAGACAACGTGACAGACCAGACGCATCACATCGTGGTGCCATCGTACTCAGCCTGGTTCGACTACAACTCCATACATACCATCGAGAAGCGTGCGCTGCCGGAGTTCTTCAATGGGAAGAACAAGTCCAAGACGCCAGAGATATACCTTGCTTACAGGAACTTCATGATCGACACGTACCGCCTGAACCCCACGGAGTACTTGACGAGCACGGCGTGTCGCCGCAACCTGGCGGGGGACGTGTGCGCTATCATGCGTGTGCACGGCTTCCTCGAGCAATGGGGCCTCATCAACTATCAGCTGGAATCAGAATCCCGCCCTACAGCGATGGGTCCGCCACCTACGTCGCACTTCCACGTACTGTCCGACACGCCGTCCGGATTGCAGCCACTTGTTACACGCCCTACGCAGCCGCGTCCGGctGAGAACGTACCAAAGGTGGAGCCAGGCTTACCCAACGGAGCCGAGGCCGGCGCAGCCGCCGCACCGCCCGCGCCGCCCATCAAGCCCGAGCCCACGCTGGACCTGGCTGCAGCGTCTGGACTCAAGCTCGACCAGTACCGTGGTGGCGTTCGCGGTCGTGGCTGGACGGAGCAAGAAACTCTGCTCCTTTTGGAGGCTTTAGAACTTCACCGCGACGACTGGAACCGTGTGGCCGCGCACGTGGGCACGCGCACGCAGGACGAGTGCATCTTGCACTTCCTGCGCCTGCCCATCGAGGAGCCCTACCTTCACGACGCACAAGCTGGTGGCGTGCTAGGCCCACTAGCATACCAGCCGATCCCGTTCAGCAAGGCAGGCAATCCAGTGATGTCCACAGTCGCTTTCCTAGCGTCTGTGGTGGACCCGCGCATCGCGTCCAGAGCTACTCGGGCGGCCATGGAAGAGTTCGCTGCTATCAAGGACGAGGTCCCGGCGGCCATGATGGAGGCGCACGTGAAGGCGGCGGGCGCGCACGGGCCGGGCGCCGCGCTGGCCGCCACCGGCATCGCCGGCACCGCGCCCGAGCTGCAGCCTGCTGCTGAACCTAAAAAGGAGGGTGCATCGGAGATTAAGGCGGAACCCATGGAGGTAGAGGAAGGCGAAGCTAAGGTGAAAGATGAGCCGCAAGAGGCGCCTCCCGCCACAGAGCCTGACAAGGAACCGAAGGAAGAACCTGCCACGCAACCCGaaaaaaccGAACCCCCGGCGACAGTGGATGCGAAACTCCAGTCCGCAGCCGCTGCAGCACTCGCCGCGGCCGCTGTCAAAGCGAAGCACCTCGCTGGCGTCGAGGAACGAAAGATTAAGTCACTGGTCGCGTTACTAGTTGAGACACAGATGAAGAAGCTGGAGATCAAGCTGAGGCACTTTGAGGAGCTCGAAGCCACTATGGAGAGGGAACGGGAAGgtctGGAATACCAACGTCAGCAGTTGATTCAGGAACGGCAACAGTTCCACCTCGAGCAGCTGAAGGCTGCAGAGTTCCGCGCGCGCCATCAAGCACACCAGAGACTGCAAGCGGAGAGCAGCGGCTCCGGCGCGGCCGGGCCGGCGGCGCCCGCGGGCCCCGGCGCGCCGCCCGACGCGCCGCCCgagcccgcgccgcccgcgcacgCCTAG
- Protein Sequence
- MKAFMDMKPGGSLCTVLATMFRFKSEQRWRKFDFQVGKNPSRKDLNVQMMMEIESSLLGAEVIRSPCVFIRPEVDKATANKVKDIVVNHQGEICEDEEEATHIVYPTVDPLEEEYARPVFRRANHVLVHWYYLPDSHDTWAQAELPVDVPETVSWDCNRAEPWRVSASWALDLPQYNEWMNEEDYELDANGKKKVHKLRLSVDDLIPGSEPSSKSKKGSKRKRSPSPPPQKHGKRKSRITKRRENDVDEEEDNASRDNTDAAPTPESERAAELHNRHDNNIMYRCTAAAPASEAPAPSDAPATPAPPPDAHDDDQAKHSDSNTQEMLTKEELEDNVTDQTHHIVVPSYSAWFDYNSIHTIEKRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHGFLEQWGLINYQLESESRPTAMGPPPTSHFHVLSDTPSGLQPLVTRPTQPRPAENVPKVEPGLPNGAEAGAAAAPPAPPIKPEPTLDLAAASGLKLDQYRGGVRGRGWTEQETLLLLEALELHRDDWNRVAAHVGTRTQDECILHFLRLPIEEPYLHDAQAGGVLGPLAYQPIPFSKAGNPVMSTVAFLASVVDPRIASRATRAAMEEFAAIKDEVPAAMMEAHVKAAGAHGPGAALAATGIAGTAPELQPAAEPKKEGASEIKAEPMEVEEGEAKVKDEPQEAPPATEPDKEPKEEPATQPEKTEPPATVDAKLQSAAAAALAAAAVKAKHLAGVEERKIKSLVALLVETQMKKLEIKLRHFEELEATMEREREGLEYQRQQLIQERQQFHLEQLKAAEFRARHQAHQRLQAESSGSGAAGPAAPAGPGAPPDAPPEPAPPAHA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00040769;
- 90% Identity
- iTF_00122340;
- 80% Identity
- -