Hamb002791.1
Basic Information
- Insect
- Hoplodrina ambigua
- Gene Symbol
- clz9
- Assembly
- GCA_949774945.1
- Location
- OX458964.1:8971470-8973272[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.4e-08 1.3e-05 25.4 0.0 3 36 10 43 8 48 0.93
Sequence Information
- Coding Sequence
- ATGAacgcaaaaaagaaatatacggTCGAGGATCTTGAAAGTGCGCTTATTGCAATTAATAATGGCAGTAGCGTCTATAAGGCTTCCCGAGAATACAACATTCCAGAAACGACATTGAGAGACAAACGTGACCAAAAATATAGTGGCCATATAGCCGGTCGCAAAACGGTACTCTCAAAATCGGAGGAAACAAAAATTGTTGACTGGATCCATTATCTAGGAAAACATGGTTTCCCAGTTTCTAAAGAGCAGTTGAAGCAAGGAGTGGCAAAGCTAGTTGAAAATTTAAACCGTCCAAATACTTTCAAAGATGGTATGCCTGGTAAGCACTGGCTTGCCAATTTTTTGTCAAGACACCCAACTGTAGCAAAGAGAGTAGCACAAACTTTACCAACTCAtcgaaacaaaattaatgaacaaGATGTGCGCAACTGGTTTGATAgagtcaaaagttattttgaaactaataatttattaggtGTGCTTGAGGATGAATCAAGAGTGTATAACTGTGACGAAACGGCCTTTTTTCTCTGCCCCAAAGAAAAAGATGTCTTAGTAAAAAAGGGCAGCAAGCGTGTGTACAATAGAGTTGCTAATGATGAGAAAGAGTGCCTAACAGTTTTAGTCAATGTGTCTGCTGGAGGTAAAATAGCTCCACCTATGGTATTGTATCCATACAAACGCCTGCCTAAAAACTTGCCTCTGACGGTGCCACCAACGTGGGGTATAGGATGTACGGAATCAGGGTGGATGAATATGGAGGCTTTTTATGAATATGTCGCAAATGTATTTTACAAGTGGttactagaaaataaaataacactgccAATTGCCCTGTTCATGGATGGACATACCTCGCACATTTCGTTGCCATTAAGTATTTTCTGCAAAGAAAAGGGAATCATACTAGTTGCGTTATTACCAAATTCGACACACCTTCTTCAACCACTTGACGTTGGAGTTTTTCGACCTGTTAAGGGTACATGGAAAAACGTAGTACACGACTTCagagtaaataataattatgccaaATTAAATCGTACAGATTTCGCCATggaagtaaaaaaatgtttcgatATAAGTATTAAAgtagatacaataaaaaatagctttagaAGCGCTGGAATCTTTCCATTTGACGCCAATAATATTGACTTCTCAAAGGTAATGCCACGGGACTCACGGGAAGCTACTGCTATTAATTCACAGGACCAGTTATATACAAAGGAAAAGAATAGTTTTTTTGAGAAGTTTGAGCAACGACTGGCCCCAGAAGTTCTTCAACTATTTGTCGAATCTGGAAATGAGTGGGAAGGTGAGGAAAAGTATAGATGTTTATTTGGGTTCTGGAAGAAAATACAACAAGAAGAACCTCCTCCTATCTTCAACGATACTACAATTGCGAACAACATACGTGATTGTGATATATCAGATGTTGTTTCGAATATAGAAATAGGTCCAAACGGTAGTATCATACTTCCTTTGAGCCTAAGTCCTAGATCAATCAAGAGCCACGATATTCCCCAACTTGATATGGATCAGACATTGACACCAGGAAATAACCATTCAAGGCGATATTCTTCTGATTCTATTTTGCAAATAGAAACCTCACTTGGTCATAATATAACTGAAGATGAGCCTCAACCTTGTTGTTCAAGAACTCAAATACTTCCTTTGAGTCTAAGTCCTAGATCAATCATGAGCCATGATATTCCCCAACTTGATATGGATCAGACATTGACACCAGGAAATAATCATTCAAGACGATATTCATCTGATTCTATTTTGCAAATAGAATAA
- Protein Sequence
- MNAKKKYTVEDLESALIAINNGSSVYKASREYNIPETTLRDKRDQKYSGHIAGRKTVLSKSEETKIVDWIHYLGKHGFPVSKEQLKQGVAKLVENLNRPNTFKDGMPGKHWLANFLSRHPTVAKRVAQTLPTHRNKINEQDVRNWFDRVKSYFETNNLLGVLEDESRVYNCDETAFFLCPKEKDVLVKKGSKRVYNRVANDEKECLTVLVNVSAGGKIAPPMVLYPYKRLPKNLPLTVPPTWGIGCTESGWMNMEAFYEYVANVFYKWLLENKITLPIALFMDGHTSHISLPLSIFCKEKGIILVALLPNSTHLLQPLDVGVFRPVKGTWKNVVHDFRVNNNYAKLNRTDFAMEVKKCFDISIKVDTIKNSFRSAGIFPFDANNIDFSKVMPRDSREATAINSQDQLYTKEKNSFFEKFEQRLAPEVLQLFVESGNEWEGEEKYRCLFGFWKKIQQEEPPPIFNDTTIANNIRDCDISDVVSNIEIGPNGSIILPLSLSPRSIKSHDIPQLDMDQTLTPGNNHSRRYSSDSILQIETSLGHNITEDEPQPCCSRTQILPLSLSPRSIMSHDIPQLDMDQTLTPGNNHSRRYSSDSILQIE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01316291; iTF_01316289; iTF_01316290; iTF_01316288; iTF_00794485; iTF_00667362; iTF_00237482; iTF_01264501;
- 90% Identity
- iTF_00667362;
- 80% Identity
- -