Basic Information

Gene Symbol
grh
Assembly
GCA_949774945.1
Location
OX458966.1:8816124-8840350[+]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.5e-09 9.9e-06 25.6 0.0 29 68 404 443 389 480 0.87

Sequence Information

Coding Sequence
ATGCACTACTCCGAACAGGAATCAGGTAGAACTACGATCCGGTCAAACCCGTCCGACGCGTGCttccaacattttttatttatttgtctgcATCGTCGGATACCGCTGGGCGTGACGTCAGACGACCTAAACTGGTTAGTGAGGGAGCAGGGATTTGCCTCGTATCCTTCCGGTTCTGCGGGTGGTTCAGACCTGTTCTACATCAGGTTGTGCGCCACCAGGCGACCCGGCCGTGGCCGCGTGACAAGACGCAAAGAGGTGATGGAGGTGAGCGGCGAGTCGTGGCGCGCATACTACTCGAGCGCGGAGCACCCGCTGAGCGCTGCTACCTCGGCGGTGCTGGGTGCCGTGGCTGACGACGGTCAGGGCCAGCCCATCGAGTACTACAAGCTGCCGCCGCTAGCCCAGGACACGCACCTCAACCTGCACAAAGACGCCAAACTTGTCGATGTGTGGCCGGCCGGCGCGACGCTGAAGGCGGCCAATGGCGCGCACGGGGCGGAGCTGGCGGAGCTGTCGGGGCTGCTGCACGCGGGGCTCGTGAAGCGCGAGCCCGAGGACCTCAGCCGCAAGGTGGTCGACGAGCCCGAGCACGCGCTCAAGCCGCCGCGACACAAGGTGGCGGTGGGCGAGCCCGGTGAAGCGGCCTCGCCGTCCCCGGCGCCTTCGCGCGCCTCCTCGGCTGGCTCGCTGCTGCCGGACGCTGCCATGTATGCAGCCCAGATGTTCGCGCCGCCAGGCACCCCCAGCCCCACCCCTTACGGCGACCAGTATTCGCGCCAGCCGGCTACCTTCGCCGGCGAGCCTTACTACAGAGAGTACTTCGTCGGCGAGGGCTACCAGCAAAGGGCTGCACCTCCTTACGGTGATGCGGAGTCTGCATCTGCTTCCGCCTTTAGTGATCGATACGCGACCCCTCGCTATCACAGCAAGAGTGTAATCGCGGCCGCTGGGCTCACAGTGGACCTGCCGTCACCAGATAGCGGTATAGGAGCCGACGCGGTGACTCCCCGAGACCACGCGTCCACCGTTCAGCAGTCGTTTGACTACACGGTGATATGCCAGCAGCCGGGTGTCGGCGAGGACGGCCGAGGGACACCGTCAGCACACCACTCGCCTGCGCAGGCGCCGCGTACCAGGCCCTGGCATGACTTCGGCAGGCAAAACGACGCCGATAAAATACAAATCGCCAAACTGTTTTCCCCGTACGGCTTCAAGTACCACCTGGAGACGGCGAGCAGCAGTTCACAGAGACGCGAAGATGACCGGATCACATACATCAACAAAGGCCAGTTCTACGGCATCACGCTCGAGTACGTCCACGATCCTGATAAACCACTCAAGAACCAAACAGTAAAGCTACTCGAATTACCAAACATGCTAACTGAtctcgtatttatttatattgaGAGGCACTCGGCTGTAATGAAATTTTCGTATTTAACTTCACGagaaaggtttaaaaaaatgtatgaaaaaatttGCATGCGCTCCGTTGAGAGTGGCAAGTTGCCAATCATGGCCGCAATCAATCACGTGTTGAGATGTCTCAATTTAGCTTGCACCCTCATCTCATGTTTTCGGCACGGCGAGGCGCACCCCGCGCCCGCTCTCAGCCCTGTCGAATCAGAAAAACGTTAA
Protein Sequence
MHYSEQESGRTTIRSNPSDACFQHFLFICLHRRIPLGVTSDDLNWLVREQGFASYPSGSAGGSDLFYIRLCATRRPGRGRVTRRKEVMEVSGESWRAYYSSAEHPLSAATSAVLGAVADDGQGQPIEYYKLPPLAQDTHLNLHKDAKLVDVWPAGATLKAANGAHGAELAELSGLLHAGLVKREPEDLSRKVVDEPEHALKPPRHKVAVGEPGEAASPSPAPSRASSAGSLLPDAAMYAAQMFAPPGTPSPTPYGDQYSRQPATFAGEPYYREYFVGEGYQQRAAPPYGDAESASASAFSDRYATPRYHSKSVIAAAGLTVDLPSPDSGIGADAVTPRDHASTVQQSFDYTVICQQPGVGEDGRGTPSAHHSPAQAPRTRPWHDFGRQNDADKIQIAKLFSPYGFKYHLETASSSSQRREDDRITYINKGQFYGITLEYVHDPDKPLKNQTVKLLELPNMLTDLVFIYIERHSAVMKFSYLTSRERFKKMYEKICMRSVESGKLPIMAAINHVLRCLNLACTLISCFRHGEAHPAPALSPVESEKR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01538504;
90% Identity
iTF_00280892;
80% Identity
-