Hvit022801.1
Basic Information
- Insect
- Homalodisca vitripennis
- Gene Symbol
- GATA-B
- Assembly
- None
- Location
- KK962355.1:644649-647841[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.9 8e+03 -2.6 0.1 3 7 72 76 71 76 0.81 2 3 2.3e-17 9.5e-14 51.6 4.3 1 34 99 131 99 133 0.97 3 3 2.5 1e+04 -2.9 0.0 24 29 252 257 243 262 0.72
Sequence Information
- Coding Sequence
- CTGGAAGAAGAACCACAACCACAATCACAGAATAATATCTCACGACTTTTGGAAGCCGCTAGCTACGCGGAGCGAAGGGCGGCGGCAGCAGCAGCGGCGGcggcagcagcagcagcagccgCTGCGGCAGCAGCGGCAGCTCGGCAGGAAAGCCCGATTATTAACACAGATGAAGATATAGAAGAAGTTGACTTGGACGACAATGCCCAGGCTTGGTGTGGCACCACCATTTTCAAGACGAACAATGGCAGTACCCCACGGCAACCATCGCTAGCAAAGAGAATGGACCTCCAATGCAGTAATTGCGGTACACGCACCACTACCATCTGGCGGCGTAACCCTCTGGGGGAGATGGTCTGCAACGCTTGTGGCCTATACTTCAAGCTACACAATATAAACCGTCCTGCTACAATGAGGCGGGACACAATACACACACGTCGCAGGCGTCCACGCGGGGACAAGCGAACAAAAGCTGCGAAGAATATCTTTCCTCCACCTGCCGGTTCATCGGAGGCCGGCAGCAGTGGGAACAACTCTGGGGGCAACAGTGGGAACAACTCGGGGGGCAACAGTGGGAGCGAAGAGTGTGACGACATGCTGGTAGCGCTGAGACGACAGATTCAACCACACTTGATGTTAGCGGCTCTACAGCAGTCTACTAACTTCCAGAGACCAACAGCCTCTCCACCACCTGTTGTCTCACCTGTGCACAACTTCACCCGTGAAACTTCACCGAACGAGGCCCCTCTCAACTTGAGCTGCGGTTTGGCTCGGATGTTATATGAGAGTATGTTGCGTACCCATGCCAGCCTGATGGGTCGTCCTAGGGCGACTTTTGACCTCTCCTGA
- Protein Sequence
- LEEEPQPQSQNNISRLLEAASYAERRAAAAAAAAAAAAAAAAAAAAARQESPIINTDEDIEEVDLDDNAQAWCGTTIFKTNNGSTPRQPSLAKRMDLQCSNCGTRTTTIWRRNPLGEMVCNACGLYFKLHNINRPATMRRDTIHTRRRRPRGDKRTKAAKNIFPPPAGSSEAGSSGNNSGGNSGNNSGGNSGSEECDDMLVALRRQIQPHLMLAALQQSTNFQRPTASPPPVVSPVHNFTRETSPNEAPLNLSCGLARMLYESMLRTHASLMGRPRATFDLS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -