Hvit019162.1
Basic Information
- Insect
- Homalodisca vitripennis
- Gene Symbol
- pnr
- Assembly
- None
- Location
- KK962364.1:237-9337[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 4.8 2e+04 -3.8 0.0 11 19 141 149 140 150 0.78 2 3 0.34 1.4e+03 -0.2 0.1 7 14 170 177 168 182 0.77 3 3 2.1e-18 8.6e-15 54.9 3.2 1 34 203 235 203 237 0.97
Sequence Information
- Coding Sequence
- ATGTGTTCAAATGCCATGCTGCCTGGAATACAGAATTGTAACACTGTAGGGCACAGTGGCGTACCATTAGTAGACAAAGTGAGAGGCCAATCAATTTTGTCGAAAGAAATTTGGCCCGGAACAGGAATTTATGATAGTTATAGCAACAATATTGTGACGGAGTGCTATGCCGTTGGTCTAGACATGTTCCACGGCGCTGCGAGCGCTGCCCCCTCGGCCAACTACTCTCCTGACACCAATACTTCCGTATTTCAATGTAGTTGTTCTTCTACCTTCATTTCTCCTGTATACGTTGTTGCCCTCCCTCTTACCCTAACCTGTGACTGCTCCCCAGGCTACTCCCAGCAGCCCGTGTACGTACCCTCGAACCGCGTGTTCCAGTGGAACCCGGCCTACAACTCCTCTAGTGGCCAGAACTCCTCATGGCACTCCCAGGGCTCCGGCTCTCACCACGAACACTACCATGGCCAGGGCTCCGCCCACTTCACCAACAGCTTCTACGCCGCCCAGACCACTATGATGTGGCGCACGTACGATCCTTCAGGCTTCCAGAGATCTCTTCCCTACGAAGACGCCATGCAGTTTCAACTAGGCGAAGGGCGAGAGTGTGTGAACTGCGGCGCCATATCCACCCCTCTATGGCGTCGCGACGGCACTGGCCACTACCTGTGCAACGCGTGCGGCCTCTACCACAAGATGAACGGCATGAACCGGCCTCTGGTCAAGCCGGCCAAGCGACTGGTCAGTCTTGGG
- Protein Sequence
- MCSNAMLPGIQNCNTVGHSGVPLVDKVRGQSILSKEIWPGTGIYDSYSNNIVTECYAVGLDMFHGAASAAPSANYSPDTNTSVFQCSCSSTFISPVYVVALPLTLTCDCSPGYSQQPVYVPSNRVFQWNPAYNSSSGQNSSWHSQGSGSHHEHYHGQGSAHFTNSFYAAQTTMMWRTYDPSGFQRSLPYEDAMQFQLGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKPAKRLVSLG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -