Basic Information

Gene Symbol
Znf711
Assembly
None
Location
KK961945.1:766358-774251[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 12 0.00064 0.089 14.1 1.0 1 23 405 427 405 427 0.98
2 12 2e-06 0.00028 22.0 0.4 1 23 433 455 433 455 0.98
3 12 0.001 0.15 13.4 6.3 3 23 466 487 465 487 0.97
4 12 2.7e-05 0.0038 18.4 0.9 1 23 493 515 493 515 0.95
5 12 2.5e-05 0.0035 18.5 0.3 1 21 521 541 521 542 0.95
6 12 0.00013 0.018 16.3 0.9 1 23 549 571 549 571 0.96
7 12 2.9e-05 0.0041 18.3 0.7 2 23 578 599 577 599 0.96
8 12 1e-06 0.00014 22.9 0.9 1 23 605 628 605 628 0.96
9 12 2.3e-06 0.00033 21.8 0.7 1 23 633 655 633 655 0.98
10 12 8.2e-05 0.011 16.9 8.9 1 23 661 683 661 683 0.98
11 12 1 1.4e+02 4.0 2.5 2 23 691 710 690 710 0.79
12 12 0.0007 0.098 14.0 0.1 1 23 716 739 716 739 0.94

Sequence Information

Coding Sequence
ATGTCAAACAATCCCTATAATGTTATCCAAGGAAAGCCTTGTACTGTCCCTGATTCAAGAAGAAATCACAATGATCTTCAGATATCTCAACTAGTGGACAGTGGAAATCAAAACGTTACTAATCTACTCATACAGAATTCACAAGGTCCATCTGGGAATCCTCTTCTTAGCTATCAAAGTACATCTTTTAGTGGTTTTTATGGCAGTCCTGGATTTAACACATCATTGTCTAGTTATGACAACAATCTTCAATGGCTCTCTGACAATAGAATACCTAACCAACATAATCAGATAACAGGATCCTTAATTCCAGATAAAAGTATCAACACTACTAGCCACTCTCTTCCTCCAACAACATCTCATTCTTGTTGTGTTAATAGGTTTGGTATGCTCGATTCTCTAGGTATATCTTCTCCACTACCAACCGAACAAGTTAGAAAAGTGATAAACCAGGTTGAGAGCACAAGATTTGTTTTGAGGGATAGTGGACAGGAAAGAAAAAATAGTAGTggaaatgaaaatttatcttctttaaacccaaatgaaaatgaaaaaaatggatttaaaaattccGAAGCAGTGTCAAGTGAAAGTGACGAAAGCAATATAATCGTTGAAGAATCGGATGATATTGGTGAGATTGAAAGTGAGATTTCCATTGAAGAAATAAAGAAGTCATATCAAGCTAGTAAAATTTGTAACAGTGAAGTGTTATTGcgatgtttaatttgtaatacagtCACATCATCATTGATGCCTGCCAACCAGTTCATTCATTTAAATGACTCATTTCCTTTGACATCATCAAGAACTCCTGTCCGTACAAAACTAGAGCAAATCTTGCCAATGGATCTGCAACATTATATAAAACTCCACAACAGTTTTATGTGCCGTCGGTGTTTAAACCTTATTGAAACTGTGGAAATACTGGAAGTCAAGTTGAAAACAACCAAGCAGGCGATTAATGACAGTTTCCTGAAGACAGTTCAGCAGCTGATGCCGGAGGTAGATCAGATGCTGGAGGAGGGTGTCCAAATTGTGGTTCAAGTTGAACATCTCTTgcaaaatgaaaaagtttctaAATCTCTTCCTACTGAAGATAACAACAAGTTGGAAAAATCAATTGTCGAAATGGATCAACAATCAgtGGAAAATGAATACCTCGATGATGAAAAAGTATTAGCAACCAGTGACTGTGAAACTACCAATGACTATGAATGTTCATACTGCAATAAGATTCTATCTTCACGGAAAACACTTGATCTTCATCTCCAGCAGCACACCAAAGAGTTTCGCTATTATTGTGAGCGATGTGGTAAAGGGTTTCCTTTGAAATCTAACTtggaaaaacatttaaactgGCACAATGGATCAACTCGAGATGTCCTGATGCTTTGTGAAATTTGCGGTGAAATCTTTACAAGCAAGCATCATTTTAACACACATCATCAGAAAAACCACTCAGGGAGTTTCAACTTTAACTGTGAAACTTGTGGAAAAGGTTTCACGAGAAAAGTTTCTTTGGAAATTCACAGTTACAAACATACTGGCATTCGACCGTTTATATGTGAATTCTGTGGACACACTTTCACTACTGAACCTAATCTTAGGAGTCATATAAAAGTATGTACTAAGGACTTTTCACACAAGTGTGATGTATGTGGAATGATCTTTGTGTTGGAGAGTCAACTAACCAGGCACAAGTTGCAACATAACGGAGTGTACAAGTTGACATGTTCAGTGTGCAGCAAGGGCTTCAACAAGCCCTCGGACCTCACCTATCATATGTTTTCACACTCCAGTGAGAGACAGCACAAATGTCCTGACTGTGATAAAACCTTCAAAACTGTAGGAAACTTGAATTACCATGCTAAAGTTGTTCATAAGGAAGAACTCTTCAGGTGTGCTGTATGTGGTAAAAGCTTTTATCAGATGTCTCTGCTCTCGGAACACATGACAACACATGCTAATGAACAACCCTATCACTGCAAGCACTGTGATAAGAATTTCGCTCACCAGTCTACCTTCATTACACACCTCAAAACCCACTCGAGTAAAGTTAAACTGAAAACATGTCAAGTATGTGGTAAATCTATCAAGACTAGGATGAGTGTCCATATGAGAACACATACAGGGGAGAAGCCTTATCAGTGCACTTATTGTCCACTTGCGTTTTCAGTGGGTATCACACTAAAAAAACACATAGAAGCTAAACATTGTAAatcgtaa
Protein Sequence
MSNNPYNVIQGKPCTVPDSRRNHNDLQISQLVDSGNQNVTNLLIQNSQGPSGNPLLSYQSTSFSGFYGSPGFNTSLSSYDNNLQWLSDNRIPNQHNQITGSLIPDKSINTTSHSLPPTTSHSCCVNRFGMLDSLGISSPLPTEQVRKVINQVESTRFVLRDSGQERKNSSGNENLSSLNPNENEKNGFKNSEAVSSESDESNIIVEESDDIGEIESEISIEEIKKSYQASKICNSEVLLRCLICNTVTSSLMPANQFIHLNDSFPLTSSRTPVRTKLEQILPMDLQHYIKLHNSFMCRRCLNLIETVEILEVKLKTTKQAINDSFLKTVQQLMPEVDQMLEEGVQIVVQVEHLLQNEKVSKSLPTEDNNKLEKSIVEMDQQSVENEYLDDEKVLATSDCETTNDYECSYCNKILSSRKTLDLHLQQHTKEFRYYCERCGKGFPLKSNLEKHLNWHNGSTRDVLMLCEICGEIFTSKHHFNTHHQKNHSGSFNFNCETCGKGFTRKVSLEIHSYKHTGIRPFICEFCGHTFTTEPNLRSHIKVCTKDFSHKCDVCGMIFVLESQLTRHKLQHNGVYKLTCSVCSKGFNKPSDLTYHMFSHSSERQHKCPDCDKTFKTVGNLNYHAKVVHKEELFRCAVCGKSFYQMSLLSEHMTTHANEQPYHCKHCDKNFAHQSTFITHLKTHSSKVKLKTCQVCGKSIKTRMSVHMRTHTGEKPYQCTYCPLAFSVGITLKKHIEAKHCKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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