Hvit009990.1
Basic Information
- Insect
- Homalodisca vitripennis
- Gene Symbol
- Mblk-1
- Assembly
- None
- Location
- KK961763.1:2096538-2107544[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-17 6.8e-15 55.3 0.1 1 45 116 161 116 161 0.96 2 2 6.8e-18 2.5e-15 56.7 0.0 1 43 539 582 539 584 0.95
Sequence Information
- Coding Sequence
- ATGACTACCCTGGAGTCTGTGGCCTCCTCCATGGCAGCAAGTCTTGCCGCGGTTGCTGCGCTGTCTCAGGGCAAGCCGCCAGTCGCCGCGGCTCTCTACCCTCCACCGCCAGGACTGTTCCCGTGGTACCTGGCCGCCCCTGAGCCCAAGCCCAGTCCACCGGTGCCCGAGCAGCCCCTGGACCTCAGCAAGAGCTCCAGCAGGTCTCCCGAGCCGATAGTTGAGACCCCACCCTCCTACCAACACTTGGTGCCCTCCTCCCCTTCGCTCAAAGTGCCGGCCGCACTCAACAGGCtctacaaAGCGAAGCCGAGGCTGAGTGCGGTGGCCGGGCGGAGGACGTACACTGAGGATGAGCTTCAGGCAGCACTCCGAGACATCCAGAGCGGTAAACTGGGAACCCGGCGAGCAGCTGTCATCTACGGCATCCCACGATCCACGCTACGCAACAAGGTGTACAAGCTGGCGATGGAGCGAGAGAGAGATTCGCACCTGGTGCTGGCGGCCAGCCCGGACCACGTGGCTGCCAAGGCGAGAGCTCTCCTGGGAGAGAAGGACGATGACGACCTGCAGGACGACGAAGATGATAAGGACTCTGGGGCAGAAGAGGAGCGTGAGGTAGAGAAGGCACTGATGAGGCCGATCATTTCCATAGAGGACTTTATGAGGTTGTCCAGTGAGAGTGCGGGATTTCCCGGTACCGATTCTTTAAGAACACTTTTGCAGCACGGGAGTAAGTATTTAGCCGAGAAGAAGGAAGACGGATCTTCCTCTCCACCGGTTTATCCTGTGTTTCCTTCCCCTGGATCCGCGGACCTGTGGAACGGTTTGGATCACGCCGCTCTAGGCCCATATATCAATCGGCTGCTCAATGCTAACCCTATAGTACACCCTAACCATTTTGCTATGACCGGTAACCGACACTCTCCTACAGAAAGAAGTCCTACGGACTCGCCTGGTGACTTTGTGCCAAAACTACCACATCTAGAATTAGTACGGAGGATGATAATCGAGGACAGGTTGGCCCAAGAAGAGCAACAGAAGAAGGAGAAACAATTTTTGAACGGTTCTCGCCTGGGAGAACCGGGACCCTCTTCTAGTATTTTCCAGGAAGACGAACATTCGGGTTCAGGAACACCGCCGAATGTGATACTGAAAATTCCGTCCTTCAAACCCATGTCTAAAAACGGAATTCCAGGAGAAACCTCAGGTTTCCCTTTAGGTGTGAAAATAGGGGAATCTAGTCAGCATTCGGTGATTTCTCCTCCGATCAGTACGGGAAGGAGTGAATCTTCTTCACCACCATCGATGGGCAAAGGCATCAACGTCAGTTTAAAAGACGTCATATCCAAGAGCATCATTCAGAAATATCAACAGTCAGCGGACCTGCATCATCTCTCCCACACGCCTCCAGGTCTAGAGCATTTCAGACGAGCGGACTTCTCCCAGCCTCTCGGATGCAGCCCTCCTATCACGAGGAACCATAACAACAACCACTTAGATGAGAGAAAGATGCATGTGCCCACATCCAAGCCTCAGATTAGTGGAAGTAACACGTCTACTACAACTGGTGGAAAGGGAACGAGACCTAAACGAGGAAAATATAGGAACTACGACAGAGACAGCTTAGTTGAGGCGGTAAGAGCCGTTCAAAGGGGGGAAATGAGTGTTCACCGAGCGGGATCTTACTACGGAGTACCTCATTCCACCTTAGAGTATAAAGTGAAGGAAAGGCATCTGATGAGGCCTCGTAAAAGAGAGCCGAAGTCAGTCCAAGAGGAGATTAAACTCAAAGAGGATCCTATCGTTTCCAGAATTCCACCACCAGTGGATAAGAGCAAGCTATTACCCCCTACAAAACCACCAAAAACTCCATTCACACCTCCATCTACTCTCCCAACAGGTCCCAACGGCCTGAAAATGTCTCCTATGTTTGATCCCTCGCTTCCTTACAGTGCAGCTCCACCTTTTCCCTTCTGGCCACCTAATCCGTTCCCTCATTTACCGATGGACTATCCCAGAAATCCAAATTTCCCACCAACACCGGACCATTTCTTTGCATCCCAGATGATACAACGCTTGCAAGAGGATTCTGCAAGGATGCCGCACAGTCCACCGCCTACTCTCGGCAAGACGGAGCGAGAGCTGGCGGAGACCCTGTATGACGGCACCGGCGCCAACGGCAGCTTTTTGGACGGAATCATTCGGTCCAGTTTGGAGTCTGGGTTACCAAAAAATAAAGATGGCGAGTTGAAGCGGCCCGAGCAGATGTCTAATAAGGCTCTTCTGGACCAACTGTGTCGAAACAGTCGGATGACTCCGGTCCCGAAGGCGGAGACGAGTAGCTCTGACGACGAGAAGACGGCTCAGAAAAGGCCTTGCGAGGATACACCCTCGGCACACCTCGAGGAGGTGAAAGAAGAAGTGAACAAAGAGGTGTCCGAGGAGCGTGATCCTTCCCCCCGACCGGAACAAAAAATAGAACCCGAATCTGAGGAAAAACCAGACGATTCTAACCTAAAAACTGACAATGTCGATGAAAGTGCCTGTGATAGTAACCATACGATAAAAAGAGTGAAGTTAGAAGAAGAGACATAG
- Protein Sequence
- MTTLESVASSMAASLAAVAALSQGKPPVAAALYPPPPGLFPWYLAAPEPKPSPPVPEQPLDLSKSSSRSPEPIVETPPSYQHLVPSSPSLKVPAALNRLYKAKPRLSAVAGRRTYTEDELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLAMERERDSHLVLAASPDHVAAKARALLGEKDDDDLQDDEDDKDSGAEEEREVEKALMRPIISIEDFMRLSSESAGFPGTDSLRTLLQHGSKYLAEKKEDGSSSPPVYPVFPSPGSADLWNGLDHAALGPYINRLLNANPIVHPNHFAMTGNRHSPTERSPTDSPGDFVPKLPHLELVRRMIIEDRLAQEEQQKKEKQFLNGSRLGEPGPSSSIFQEDEHSGSGTPPNVILKIPSFKPMSKNGIPGETSGFPLGVKIGESSQHSVISPPISTGRSESSSPPSMGKGINVSLKDVISKSIIQKYQQSADLHHLSHTPPGLEHFRRADFSQPLGCSPPITRNHNNNHLDERKMHVPTSKPQISGSNTSTTTGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKSVQEEIKLKEDPIVSRIPPPVDKSKLLPPTKPPKTPFTPPSTLPTGPNGLKMSPMFDPSLPYSAAPPFPFWPPNPFPHLPMDYPRNPNFPPTPDHFFASQMIQRLQEDSARMPHSPPPTLGKTERELAETLYDGTGANGSFLDGIIRSSLESGLPKNKDGELKRPEQMSNKALLDQLCRNSRMTPVPKAETSSSDDEKTAQKRPCEDTPSAHLEEVKEEVNKEVSEERDPSPRPEQKIEPESEEKPDDSNLKTDNVDESACDSNHTIKRVKLEEET
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -