Hvit004661.1
Basic Information
- Insect
- Homalodisca vitripennis
- Gene Symbol
- osa
- Assembly
- None
- Location
- KK961632.1:1286076-1299715[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-14 4.8e-11 43.7 0.0 2 51 185 234 184 234 0.95
Sequence Information
- Coding Sequence
- ATGCCCCCTAGTCCTGGAAGTTACCCAAACAATGCCACACCGCTGGGTATGGGACCGCCACACCATCATCCTATGGGGCCTCCGTCCATGGGCCCTCCCAACAGCCATGTGGGCCAGCCTCCGCCATCATCCACCCCTAACTCTCACCTCTCTCTGGACACTCCCACCACAACACCTAGTGACCTGCATGACAACGGCATTACAACTACAGCCACAGGTACAGTGATGTCCAGTAGTCAAGGTGGAGTCACCCAGCTGGTCACCACTGGGCCTGACGGGGCTCCCATAGATGAAGCCTCTCAACAGTCTACACTCTCCAATGCTTCTGCAGCGTCAGGGGAGGACCCTTCGTGCACACCCAGCAAGTCACGAAAGGACAACATGTATCACCCCTCCACTCCCCAGAGCACAGTACCAAGCCCGGGCGCAGCGTCTATGAATTCCATGCATGACGAGTACCCGCCGGACAGCAGCCCAACGTGGCCCCGCACGCCCGCTAGTCCGAAGCAGGACAGTCTGAGTAAGCTGTACGAGATGGACGATGCGCCTGACCGTCGGCTCTGGCTGGACAAGCTACTGCAGTACATGGAGGATAGAGGATCACCCATCACCACATGTCCCACCATCTCCAAGAACCCCCTCGATCTCTTTCGACTATACCTCTATGTCAAGGAGAGAGGGGGCTTCATGGAGGTATGCAAG
- Protein Sequence
- MPPSPGSYPNNATPLGMGPPHHHPMGPPSMGPPNSHVGQPPPSSTPNSHLSLDTPTTTPSDLHDNGITTTATGTVMSSSQGGVTQLVTTGPDGAPIDEASQQSTLSNASAASGEDPSCTPSKSRKDNMYHPSTPQSTVPSPGAASMNSMHDEYPPDSSPTWPRTPASPKQDSLSKLYEMDDAPDRRLWLDKLLQYMEDRGSPITTCPTISKNPLDLFRLYLYVKERGGFMEVCK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -