Basic Information

Insect: Hololepta plana
Gene Symbol: -
Assembly: GCA_963695495.1
Location: OY968841.1:5154239-5158802[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00043 0.036 14.2 0.4 2 23 71 93 70 93 0.96

2 16 8.5 7.2e+02 0.7 0.1 1 20 99 118 99 120 0.88

3 16 0.52 44 4.5 1.7 1 23 187 211 187 211 0.91

4 16 0.00028 0.024 14.8 4.6 1 23 214 237 214 237 0.96

5 16 0.01 0.88 9.8 2.4 2 23 244 266 243 266 0.95

6 16 4e-05 0.0034 17.4 2.8 1 21 367 387 367 388 0.95

7 16 0.0025 0.21 11.8 2.0 2 23 400 422 399 422 0.93

8 16 0.3 25 5.2 1.0 1 23 425 448 425 448 0.95

9 16 3.4 2.9e+02 1.9 3.2 3 23 451 474 450 474 0.93

10 16 0.046 3.9 7.8 0.3 1 23 478 501 478 501 0.96

11 16 0.25 21 5.5 0.4 2 23 508 530 507 530 0.94

12 16 0.047 4 7.8 0.5 2 23 539 561 538 561 0.94

13 16 0.0081 0.69 10.2 0.1 3 23 568 589 567 589 0.95

14 16 0.93 78 3.7 2.8 3 23 732 753 731 753 0.96

15 16 0.26 22 5.5 0.3 2 23 760 782 759 782 0.92

16 16 0.15 12 6.2 1.1 1 23 795 817 795 817 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00043	0.036	14.2	0.4	2	23	71	93	70	93	0.96
2	16	8.5	7.2e+02	0.7	0.1	1	20	99	118	99	120	0.88
3	16	0.52	44	4.5	1.7	1	23	187	211	187	211	0.91
4	16	0.00028	0.024	14.8	4.6	1	23	214	237	214	237	0.96
5	16	0.01	0.88	9.8	2.4	2	23	244	266	243	266	0.95
6	16	4e-05	0.0034	17.4	2.8	1	21	367	387	367	388	0.95
7	16	0.0025	0.21	11.8	2.0	2	23	400	422	399	422	0.93
8	16	0.3	25	5.2	1.0	1	23	425	448	425	448	0.95
9	16	3.4	2.9e+02	1.9	3.2	3	23	451	474	450	474	0.93
10	16	0.046	3.9	7.8	0.3	1	23	478	501	478	501	0.96
11	16	0.25	21	5.5	0.4	2	23	508	530	507	530	0.94
12	16	0.047	4	7.8	0.5	2	23	539	561	538	561	0.94
13	16	0.0081	0.69	10.2	0.1	3	23	568	589	567	589	0.95
14	16	0.93	78	3.7	2.8	3	23	732	753	731	753	0.96
15	16	0.26	22	5.5	0.3	2	23	760	782	759	782	0.92
16	16	0.15	12	6.2	1.1	1	23	795	817	795	817	0.96

Sequence Information

Coding Sequence: atggaGACAAAAATCTGCAGAATTTGTGGCAAATTATCGGAGAACTATGTTCACATATTCAAAACGGAAGGtctaaaaaacaaaatcgaaacATGTTTACCCATCATCGTATCGCCACATTGTCTCTTACCGGACACAATATGCTGTGATGTTAATTCAATGGACAATTCTCAATCGGACGAGCAGCCGCCGACGTTACAACCGAGCATCGTTTGTCCGTTGTGTCCGTCGGTCTACACGAATCGCCCGGATTTGTTTCATCATTTGCGTTCGAAACACGCGAAAGAATCGACTTATTTGTGCGGCCTTTGTCTGAACATGTTAACGTCGTACGCTAGTCTGACCAATCACGTGGAAAAGTGCCGTAAGAATTACGCGATTAGCGGTAGATACGTGTGCAAAATATGCGCTTATAACGACGACAGTAACAGAGCGGTGGAGAACCACGTGAAGGCTCACGATTTCATATTGACGTTTTGCAAGCAACAATCGAAGATTTACGATCCGAACGATTACGTCGACTTCAATCCGCTCAGCGAGGCGGCGCAACAGAAGACGTATCAGTGCACCGAGTGCGGTTCGAACGATTTCGAGACGTTCAAAGATTTCAGCGAACATCGCCGCAACAAACATCAGATATTCCATTGCGATCTGTGCAACAAATTCTACGGCCGCAATTCGCATCTATGGAAGCACGTGAACCGATTGCACAAGGGCGATCCGAGCATCACGTGTCAGCTGTGTTACAAGACCAGTGCCTCCAAGTATCACCTGGCCCAGCATTTCAACAAGTTGCACACGACGAAACCGAGTAAAAGCAACAAAACGGACGATTTCCTATCGCAGAAGTTCGAAGGCTTCGACTTCCAATCCGTGCGACAGAGTTTCATGCGACAGGAGCTGTTGGAACAGGCGAAAAACGAGTTGGCCAGCGActacgacaacaacaattcgGATTACGACGACAGCGAGAAGAACAgcagcaataacaacgacaacgCCGGGTCGAGAGGTGCGAATTTACCGAAAGAGATCGACGCTTCGAGCAACTTGTACACGAACATAATAACGAACTATTCGCCCCCGCAGGAAGGCGAATTCAAGTGCCCGAAGTGTCACAAGGGGTTCGTCATGAAGTCGCTGCTGAAGAAGCACAAGAAGAATTGCAGGCCGCGAATGCAAAAGGACCTGTTGACGCGCTGCAAGTCGTGCTCACGCATATTCAAAGACCGGCAGAGTTTGGCGAAGCACCTGACCAATTACCATTCCGAGTACGCGTGCGAGATATGCAAGGAGAAGGTGCAGAGCAAGTGCGAGATCGTCTCGCACATACGTTTCTCGCATCCGAACTGCCATCTGTTCTGCCATTGCGGCGACATTCTGCGTAACACCGACGATCTGATCGCGCACCAGAACGATCATTGCAACTCGTTCGTTTGCCAGTTCTGCGGCGACACGCTCGAGACGAAGATCAAGCTGAAGATGCACATATTGAGCTTGCACCGTAAGATATTGAGCCTGAGCTGCGGCATCTGTCTGAAGCTGTTCGAGACGCAGCACATATTGCGCGACCACGTGCGTTTGGTCCATAAGAGTCATCTGAAGCCGTTCGTTTCGTGCACCGTTTGCGGCAAGAATTACGGCTCGAAGTGGAAGACGTACGATCACTTGAACAAGTCGCACGGTCGCATTTTCAGAGCGTGCAAAGTTTGTTTGGAGGTGTTCGACACCGACGACGAATTGGAGAGGCATTACGGTACCAAACATTCGCGGACCGCCAACAATAACAAGGGCATCGATTCGAGTTATTCGTCGAGTGTGTCGATTAAAAAGGAGACATACGAGAGCGATTTCGAGGACGAGAAGCACTTCCTGTCGGACCTGAGCAACGATTACGAGCACGAGCCGAACGAGTCGTGCGATTTTGGCGACGGCAGTAAGATGTCTTTGTTGGAGAAACGGTTGTTGAGCAGTGCCGTTAAAAGCGAATCGAGCACTCCCGATAAGAGCAACAAGTCGGAAGCGGATGGGGGCAATAGCAAGGCGAAGGCTAACAAAAGCAAAAGGATggagatcaagatcgagaagATGTGCGAGGAGGAGAAGGAGTACATGCAAAGGGCGGAGAACCAAGCGCTGATGCAGAGCGGCTCGAAGCGGACGGTCTACGTGAACAGCAACGATCCGTCGCTGTGCGAGATTTGCAAGAAGACGTGGCCGGCCAAGAAGCACCTCTGGCAGCATTACATCCGGTGTCACAAGTCGGTGGCGGCCACCGTCTGCGGCATATGTCTGAAAACGAACGACAACTACGAGACGTTGCAGAATCACTTGCGCGAAACGCACCCGACGCTCCTGCACGGCCAAGGTTTCGGCTCGAACTTTATATGTCGCATCTGCGGGCGGTACCATAACGCCCGATCGAAACTGAAACTGCACATGGCCATACACGAGAACTTCAATTTGTCGCTGCTGGAGAAGTCGCCGGACAACGTTAAATCGaacgaggacgacgatgatgacgacgacgacgacgaagaggaggaggaggaggataaGTCCAACGTCGAACCGACGACGAACGGCTTCTATTCGAACAGTCTGCCGaacaacggcgacgacgaggaggacgaggacATCAATTACGAGAATCTAATCGAGCAGGTCGAGTGCTCTTCGGGGAGCGAACTGAACGACACCGATAGCGAGGCGGCGAAGGTCGAAGAGGAGGAGGCGCAGGCAGCGGAAGAGGAGCGTAAAATTCAAGTGGTCTCGAGCGACAACGACACCGAGAACGAATCGAACTTCTCCGATCTCGAGAGCGAGATGCTGAAGAACATGATATTAGAGAAGAACGGTTTCTGCGATAAGGAGGagaagaacgagaaagagagttTCGCCGTTAAGAGCGAAGTGAAAATCGAGTCcgacgaggacgaggaggaggaggaagcgGACGAAGAGGTGGAGGAGGAAGACGTCGTCGAGGACGAGGTGGACGACTATTCGACGTCCGGCAGCGACGAGTCGTCGAACAATTCCACGTTCAGCGACTTTTCCGCGCAACTAATCAAAACgtcggacgacgacgacgaagaagacgaggaCGTCGTCATGGGCTTGGTCGAGGACGAGGCGGCGGAGATGGACGAGGACGTGCGCAACGAGTCGCGACACTCGAACACCAACGATTCGACGGCCGACGATAACAACGTGTCGCCGTACGGCGAGCGATTGGAGAAGTCGGAGGAATTGGATTCGGCCATCAGGTCGATCAGTTACTCGACGATCGAGCAAACGGACGACGACCCGGCGGAGAACGACTACGGCGGCGACGTGGCGAACAGCCAAAGTTTGAATCAGCACGAGTTACAATCGGCCGTCGACAGTATACTTTAA
Protein Sequence: METKICRICGKLSENYVHIFKTEGLKNKIETCLPIIVSPHCLLPDTICCDVNSMDNSQSDEQPPTLQPSIVCPLCPSVYTNRPDLFHHLRSKHAKESTYLCGLCLNMLTSYASLTNHVEKCRKNYAISGRYVCKICAYNDDSNRAVENHVKAHDFILTFCKQQSKIYDPNDYVDFNPLSEAAQQKTYQCTECGSNDFETFKDFSEHRRNKHQIFHCDLCNKFYGRNSHLWKHVNRLHKGDPSITCQLCYKTSASKYHLAQHFNKLHTTKPSKSNKTDDFLSQKFEGFDFQSVRQSFMRQELLEQAKNELASDYDNNNSDYDDSEKNSSNNNDNAGSRGANLPKEIDASSNLYTNIITNYSPPQEGEFKCPKCHKGFVMKSLLKKHKKNCRPRMQKDLLTRCKSCSRIFKDRQSLAKHLTNYHSEYACEICKEKVQSKCEIVSHIRFSHPNCHLFCHCGDILRNTDDLIAHQNDHCNSFVCQFCGDTLETKIKLKMHILSLHRKILSLSCGICLKLFETQHILRDHVRLVHKSHLKPFVSCTVCGKNYGSKWKTYDHLNKSHGRIFRACKVCLEVFDTDDELERHYGTKHSRTANNNKGIDSSYSSSVSIKKETYESDFEDEKHFLSDLSNDYEHEPNESCDFGDGSKMSLLEKRLLSSAVKSESSTPDKSNKSEADGGNSKAKANKSKRMEIKIEKMCEEEKEYMQRAENQALMQSGSKRTVYVNSNDPSLCEICKKTWPAKKHLWQHYIRCHKSVAATVCGICLKTNDNYETLQNHLRETHPTLLHGQGFGSNFICRICGRYHNARSKLKLHMAIHENFNLSLLEKSPDNVKSNEDDDDDDDDDEEEEEEDKSNVEPTTNGFYSNSLPNNGDDEEDEDINYENLIEQVECSSGSELNDTDSEAAKVEEEEAQAAEEERKIQVVSSDNDTENESNFSDLESEMLKNMILEKNGFCDKEEKNEKESFAVKSEVKIESDEDEEEEEADEEVEEEDVVEDEVDDYSTSGSDESSNNSTFSDFSAQLIKTSDDDDEEDEDVVMGLVEDEAAEMDEDVRNESRHSNTNDSTADDNNVSPYGERLEKSEELDSAIRSISYSTIEQTDDDPAENDYGGDVANSQSLNQHELQSAVDSIL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -