Basic Information

Insect: Hololepta plana
Gene Symbol: RREB1
Assembly: GCA_963695495.1
Location: OY968833.1:4573618-4579652[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 1.8e-05 0.0015 18.6 0.7 1 23 108 130 108 130 0.99

2 16 0.0002 0.016 15.3 0.2 1 23 151 173 151 173 0.98

3 16 1.2e-05 0.0011 19.0 6.2 1 23 179 201 179 201 0.99

4 16 0.071 6 7.2 0.5 1 23 285 309 285 309 0.87

5 16 0.0093 0.78 10.0 4.2 3 23 317 338 316 338 0.96

6 16 0.8 67 3.9 0.5 1 21 389 409 389 410 0.84

7 16 0.097 8.1 6.8 0.2 1 23 540 562 540 562 0.97

8 16 4.1e-06 0.00035 20.6 0.7 1 23 571 593 571 593 0.99

9 16 0.00089 0.075 13.2 2.3 1 23 599 622 599 622 0.97

10 16 0.00045 0.038 14.2 2.8 1 23 1003 1026 1003 1026 0.96

11 16 7.7e-05 0.0065 16.5 0.3 3 23 1276 1296 1274 1296 0.97

12 16 0.056 4.7 7.6 4.2 1 23 1302 1325 1302 1325 0.96

13 16 0.053 4.5 7.6 4.8 1 21 1369 1390 1369 1393 0.95

14 16 1 85 3.6 2.8 1 23 1450 1473 1450 1473 0.92

15 16 0.01 0.88 9.8 0.4 3 23 1521 1541 1519 1541 0.93

16 16 0.0047 0.4 10.9 5.9 1 23 1547 1569 1547 1569 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	1.8e-05	0.0015	18.6	0.7	1	23	108	130	108	130	0.99
2	16	0.0002	0.016	15.3	0.2	1	23	151	173	151	173	0.98
3	16	1.2e-05	0.0011	19.0	6.2	1	23	179	201	179	201	0.99
4	16	0.071	6	7.2	0.5	1	23	285	309	285	309	0.87
5	16	0.0093	0.78	10.0	4.2	3	23	317	338	316	338	0.96
6	16	0.8	67	3.9	0.5	1	21	389	409	389	410	0.84
7	16	0.097	8.1	6.8	0.2	1	23	540	562	540	562	0.97
8	16	4.1e-06	0.00035	20.6	0.7	1	23	571	593	571	593	0.99
9	16	0.00089	0.075	13.2	2.3	1	23	599	622	599	622	0.97
10	16	0.00045	0.038	14.2	2.8	1	23	1003	1026	1003	1026	0.96
11	16	7.7e-05	0.0065	16.5	0.3	3	23	1276	1296	1274	1296	0.97
12	16	0.056	4.7	7.6	4.2	1	23	1302	1325	1302	1325	0.96
13	16	0.053	4.5	7.6	4.8	1	21	1369	1390	1369	1393	0.95
14	16	1	85	3.6	2.8	1	23	1450	1473	1450	1473	0.92
15	16	0.01	0.88	9.8	0.4	3	23	1521	1541	1519	1541	0.93
16	16	0.0047	0.4	10.9	5.9	1	23	1547	1569	1547	1569	0.98

Sequence Information

Coding Sequence: ATGCAAGGCATCCTTTATATGCCACAGAATTTGCAGACAGGCTCGTCGCCACCGTATAGGCAACTCGATGAGACTATGGCAATGGATATGACAACATCATCGACGACAGCACCGTTATCAGCGTCCTCATCAACATCGACAGCGATAACCAAAGACTCATCGACAGCGAACCAAAGTAATCGAAGCGATTCCGGCATCttctcgtcgacgacgaacaCGACGTGCCCGGAGGAACCGATGTCGTCCGGCCGGACGTCGAACGCGTCCGCATCGGACATCGACAATCGCAGCGATTGCAGTACGCCGCCGTCGGACAAACGTTACGTGTGTCCGATCTGCGACGCCACATTAACTTCGCAGCATCAGTTCACGTTGCACATCCGGTCGCACAACAACAGCGGGAACGGTAACGGCGCGAACGGCGGCGCCACCGGCGACGAGACGAACGGTTTCACGTGCAAGATTTGCAACAAAGTGTTGAGCAGCGGCTCGAGTCTCGATCGACACGTGCTGGTGCACACCGGCGAGCGACCGTTCACGTGCAAACACTGCGGCGACACGTTCACCACCAACGGCAACATGCACCGTCACATGCGCACGCACAAGGTCAACTACGAGTCGGACGGCGGCGGCACCGCGACGGACACGAGCAACGGTTCCGCGACGAAGCGGATCGagttcaacaacaacaagtacgcgaacaacaataacaacaagaaacgGAAGTTGGACCGGTCGACgacggaggaggaggacgacgacgacgacgacgaggacagCGACAGCAATTGCAAACGGATTAAACGCGAAGAATTACTGGACGAGGATCGCGCCGACAACGACGGCGACGCGTACAAGTGTCCGATTTGCAAGCGGGACGATTTCACGTCGTCCGTCCACTTGGAGATCCATCTCGAGGACAATCATCCGGACTATCCGTCGCGCTGCTGCCACGAGTGCAATCAGGTGTTCGAGAGCGCGAAGCAGTTGAGCTACCACAAGAAGAGCGTGCACGTGGAGGAGAACGGCGTCAGGGAGGGCGCGAGGGGTTCGGTGATCGGCTTCAAAACGTTGAACTACATCGACTTCTCCAGCAACAAGTTCCCGCATATCGCTCGCATCGAGTGCGAGAGGAACTTGCACAAGGCGTCGACCGGTCCGCAATTCGTTTGCGACAAGTGTTCGCGCGCGTTCCCGTGCGCGAACTCGTTGGACATTCACAAGCGCGATTGCATCGCCGTCGCGGCGGCGACGAGCGACGGCGCGTCGTTAGATTTGAGCAAGAGTTCGCGACGGACGGAGACCGAGATGCGACGGGCCGACTTCTTCGCGCACTTGGACCTGCAGAATAACGCGATCAAGGAGGAGATCGATCGCGACGAGCGCACGCCGACGCCGAACGATAACGCGAAAGATTTGGCGGACATACCGTCGATCATTTCGATGACGAGCAATAGCGGCTCGTTCCTGCAACATTTGCACATGAGGAGCAGCAACGACGCGTCCAGCCAGCACAGTTTCGATCAGTCGGACGCCGGCGGCAAGAcggagaaggaggaggaggaatcgCAGGATCAGTTCGCGCAAGAGTTTCGCCGCATGAAAATGCGCGGCGAGTTCCCGTGCCGGTTGTGCACGGCGATTTTCCCGAATTTGCGCGCGCTCAAAGGCCACAATCGGCAACATTTGAACGGCACGTCGAACGGCATGTACCGTTGCAACATGTGCCCGCATTCGTCCGTCGATAAAGCGGCGTTGATCAGACACATGCGGACGCATAACGGCGATCGGCCGTACGAGTGCGCGCTGTGCAATTACGCGTTCACGACGAAAGCGAACTGCGAACGGCATTTGCGTAATCGACATTCGAAGAGCACGcgcgaagaagtgaaaaagtCGATCATCTACCATCCGTCCGAGGATCCGACCAACGAGGAACTGACCAAGTTGGTATCGAGGGACGAGAAGAAGATCAGTAATGCGGACGTATCGGATTACAGTCCGGAGAAAGGGCGCAGTTCGACGCCGAAAACTAGTCTCCCGCCGCCGTCCAATCTGGTACAAGACGAACAACTGCCCGTTTTGCCGATGAGCAAATCGTTCGCGAATTTAAACGACATCATACACAACGAGAATATTAAGTCGTTCAAAGAGAAGTTTGCTCAAAACGATCACCTGACGCCGTATAACAATACGTTACAAGGACTGTTCACGCCAAAATTAAGCAATACGTCGACGCCAAGGAAGATTGTCCCAAAGATACAAGTGAAAGATATCGACACGTTGAAACATCTACCCGAACAGAACCCGCCGAAAGCCAACTCCTACAACGACGATTCGATGGACATGGTCTTGGATTTAAGCAAGAAACGCACGGAAAGCGTCGCCGACGACGataacgacaacgacgacacGCAAAACGaggacgatgacgatgatgacgcaCCGCAAGACTTGACGAAGAAAACGCCCGAAATACCGTCACCCGCCGTCGTTAACGAACTTTTAGCTCAACAGTTCCTGAAGAACATGCCGAAACTCGATCCGGCGACATTCTATCAATACGCTTTCTTACGCGGCATACCGAGTTTAGCCAATTGGCCGCCGTATCCGATAAATCCGTTCCTCTTCCCCGGCCCGATTCTAGCGCCAGACGCTCAAGACTTCAAGGAACGGATGCAACGATTGCAACAAGGGGGCGAATTGATAACCGACAATTTCGACCGGATGAAACCGTTCCAAGCGAATCATCCGCCGAATCTGATGGGTAGTTTCAAAGCGACCGAGCCGGAGATCAATTATCCGAAGACCGACGACTTGAAACCGTTGTCGTTAAACGTCGACGCCAACAATTATCCGGACGCGATCGCCAAATTGCAGAGTCCCATCGcgcaaaacaacaacaaaccggAACTGATGGCGTCGCCGAATTCCGTCAAGATGGTAATTAAGAACGGCGTCTTGATGCCCAAACAGAAACAGAGGCGTTACCGCACCGAGAGACCGTTCTCCTGCGAGCACTGTTCGGCCAGATTCACGTTACGTTCGAACATGGAACGGCACATAAAGCAACAACATCCGCAATATTGGTCGCAACGGCAACGTTCGAACGTCGGGACGCCGGGCCGCAAGAGCCACAGCAACGTCGTGGCCGCCACGTACAAGAACAACTTCGAATTGAACGTGCCGAGTTACGAGAGTCTAAAAGTGCCGGACGTCGAGGAGAAACAAACCGAACAACCGATTAGCGACAAACTGAAGTACGCAATTTTGGCGCAACATTTACGCGCACAGACCAACTTGGCGATGGCCAGAaaggacgaagacgacgaggaagaagtgGGCGGTGGGTGCGGTGGCGGCGTCGTTGGTGCCGCTGGTGGCGGCAGTTTGGTAATCgacgaaaaaggagaagataAAAACGGCACCGAATGCGACTCGTACAAGGTGTTCGCGAGTAATTTGACGTCCGAATTCGTCGAACGCGGCAAATTCTACGACTACAGACCGAAAGCGATTGTTAAAAGATCGAATCCGAAcgcgaataacaacaacagcaagaacgACGAAACACAAGATCTCGTTCCTGTTTCGCGACTGTTGGACAACGCTTCGCAACAGCAATTCGCGGAGTATTTCCACAGGGACGGCGACGAGCAGGATAACGACGGCATCAgcgaggaggacgaggagggTCTGGTGGCGAGCGGCAGCACCAGCGAGGCAAACTCCGGCACCGACGAGAACAAATCCGAATCGGAGAATCCCAATCCAGTCGttgtgaagaagaagagcgccTATTCGTTGGCGCCGAACCGCATCAATTGTCCTTACTGCGAGCGCAAATTCCcgtggtcgtcgtcgttgcggCGGCACATCTTGACGCACACCGGCCAGAAACCGTTCAAATGCAGCCAGTGTCCGCTGTTGTTCACGACGAAATCGAATTGCGACCGGCACTTGCTGCGAAAGCACGCCAATGCCGCCGCAGCCATCGTCGGCACCGAAACGGCCAACAGCAACTGCAACGCCACCAATACCGCCATCAGCAGCAACAGTAGCGGCACGCCGACGTGTTTGACGCGAAACGTGCCGGAAAGGCCGTACAAATGTAACAGTTGCCCGAGTAGCACGTTCTCCACGTACTCCAATCTCAAGAAGCACATGAACTGCAAACACACGACGAGCGCGGAGAGTCAAGGCTACGAGGGCAGCTCGGAGGACGAGAAAGTGACGCCGACGAAAACGATGGACTGGGACGCTCAAATTtccgccaacaacaacaataacaacaacaacaacaacaacaaaatcggGGACGGGCACATGTCGAATTCGGATCTGCCGTTCAAGTGCCACCTGTGCGAGGGCTCGTTCGTCGATCGTCAAGACTGTTTGGATCACATCCAGGAGAAACACGTGGCCGAGTACGAGCTGCTGATCGCGAAGAACGCGTTGGACTTGAACGCGACGACGCCGGACGATTCGAATAAtccggacgacgacgatcagaACGAGATACGCGGCAAGTTCCCGGACTATTCGAATCGCAAAGTGATTTGCGCGTTCTGCATGCGTCGCTTCTGGTCCGCCGAAGATCTGCGCCGTCACATGCGGACGCATACCGGCGAGAGGCCGTTCAGCTGCGACATTTGCCGGCGACGGTTCACGTTGAAGCACAGCATGTTGAGGCACCGGAAGAAACACGATCTGAACAAGTTCGAGACGGATAACGGGCAGAGCGACGAAGAAGGCGCGACGAACCCGTCGCCGCCGGCGTCGTACGAGCGCACGAAAAAcgagaataacaataataataataatgtgaaagAGAACAAAACCGACGATTCGGATTGCAACGAGGGCGGCGATTTGATAAGCAATTTGTTGGGCCTTCGCGATAGTTCGATCATCGAGAAAGTGCTGACCGCGTCCGCGGACGATGCCGCCAAATTGCTGGGCATGAAGAACGGCCACGAATGA
Protein Sequence: MQGILYMPQNLQTGSSPPYRQLDETMAMDMTTSSTTAPLSASSSTSTAITKDSSTANQSNRSDSGIFSSTTNTTCPEEPMSSGRTSNASASDIDNRSDCSTPPSDKRYVCPICDATLTSQHQFTLHIRSHNNSGNGNGANGGATGDETNGFTCKICNKVLSSGSSLDRHVLVHTGERPFTCKHCGDTFTTNGNMHRHMRTHKVNYESDGGGTATDTSNGSATKRIEFNNNKYANNNNNKKRKLDRSTTEEEDDDDDDEDSDSNCKRIKREELLDEDRADNDGDAYKCPICKRDDFTSSVHLEIHLEDNHPDYPSRCCHECNQVFESAKQLSYHKKSVHVEENGVREGARGSVIGFKTLNYIDFSSNKFPHIARIECERNLHKASTGPQFVCDKCSRAFPCANSLDIHKRDCIAVAAATSDGASLDLSKSSRRTETEMRRADFFAHLDLQNNAIKEEIDRDERTPTPNDNAKDLADIPSIISMTSNSGSFLQHLHMRSSNDASSQHSFDQSDAGGKTEKEEEESQDQFAQEFRRMKMRGEFPCRLCTAIFPNLRALKGHNRQHLNGTSNGMYRCNMCPHSSVDKAALIRHMRTHNGDRPYECALCNYAFTTKANCERHLRNRHSKSTREEVKKSIIYHPSEDPTNEELTKLVSRDEKKISNADVSDYSPEKGRSSTPKTSLPPPSNLVQDEQLPVLPMSKSFANLNDIIHNENIKSFKEKFAQNDHLTPYNNTLQGLFTPKLSNTSTPRKIVPKIQVKDIDTLKHLPEQNPPKANSYNDDSMDMVLDLSKKRTESVADDDNDNDDTQNEDDDDDDAPQDLTKKTPEIPSPAVVNELLAQQFLKNMPKLDPATFYQYAFLRGIPSLANWPPYPINPFLFPGPILAPDAQDFKERMQRLQQGGELITDNFDRMKPFQANHPPNLMGSFKATEPEINYPKTDDLKPLSLNVDANNYPDAIAKLQSPIAQNNNKPELMASPNSVKMVIKNGVLMPKQKQRRYRTERPFSCEHCSARFTLRSNMERHIKQQHPQYWSQRQRSNVGTPGRKSHSNVVAATYKNNFELNVPSYESLKVPDVEEKQTEQPISDKLKYAILAQHLRAQTNLAMARKDEDDEEEVGGGCGGGVVGAAGGGSLVIDEKGEDKNGTECDSYKVFASNLTSEFVERGKFYDYRPKAIVKRSNPNANNNNSKNDETQDLVPVSRLLDNASQQQFAEYFHRDGDEQDNDGISEEDEEGLVASGSTSEANSGTDENKSESENPNPVVVKKKSAYSLAPNRINCPYCERKFPWSSSLRRHILTHTGQKPFKCSQCPLLFTTKSNCDRHLLRKHANAAAAIVGTETANSNCNATNTAISSNSSGTPTCLTRNVPERPYKCNSCPSSTFSTYSNLKKHMNCKHTTSAESQGYEGSSEDEKVTPTKTMDWDAQISANNNNNNNNNNNKIGDGHMSNSDLPFKCHLCEGSFVDRQDCLDHIQEKHVAEYELLIAKNALDLNATTPDDSNNPDDDDQNEIRGKFPDYSNRKVICAFCMRRFWSAEDLRRHMRTHTGERPFSCDICRRRFTLKHSMLRHRKKHDLNKFETDNGQSDEEGATNPSPPASYERTKNENNNNNNNVKENKTDDSDCNEGGDLISNLLGLRDSSIIEKVLTASADDAAKLLGMKNGHE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -