Basic Information

Insect: Hololepta plana
Gene Symbol: -
Assembly: GCA_963695495.1
Location: OY968832.1:10297429-10302001[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.13 11 6.4 0.4 1 20 291 310 291 312 0.94

2 19 0.08 6.8 7.1 0.9 1 23 341 364 341 364 0.90

3 19 0.077 6.5 7.1 0.1 6 20 375 389 373 391 0.93

4 19 1.5e-06 0.00012 22.0 1.1 3 23 498 518 496 518 0.97

5 19 0.021 1.7 8.9 0.3 3 23 527 548 525 548 0.91

6 19 0.0099 0.84 9.9 0.0 2 23 563 584 562 584 0.96

7 19 0.00055 0.046 13.9 0.1 1 23 588 610 588 610 0.98

8 19 0.027 2.3 8.5 0.3 1 23 657 680 657 680 0.95

9 19 0.4 34 4.9 0.4 2 23 692 713 692 713 0.91

10 19 1.7e-08 1.4e-06 28.1 3.6 1 23 734 756 734 756 0.99

11 19 0.028 2.4 8.5 2.2 3 23 776 796 774 796 0.97

12 19 9.3e-06 0.00078 19.4 4.8 1 23 817 839 817 839 0.97

13 19 4.4 3.7e+02 1.6 0.1 2 23 855 877 854 877 0.83

14 19 5.7e-05 0.0048 17.0 1.8 1 23 893 915 893 915 0.95

15 19 8.9e-05 0.0075 16.4 0.0 1 23 956 979 956 979 0.95

16 19 8.7e-05 0.0074 16.4 2.1 3 23 991 1011 990 1011 0.97

17 19 1.3e-05 0.0011 19.0 4.8 1 23 1025 1047 1025 1048 0.96

18 19 3.5e-06 0.00029 20.8 0.6 1 23 1062 1084 1062 1084 0.99

19 19 0.00038 0.032 14.4 0.1 1 23 1107 1130 1107 1130 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.13	11	6.4	0.4	1	20	291	310	291	312	0.94
2	19	0.08	6.8	7.1	0.9	1	23	341	364	341	364	0.90
3	19	0.077	6.5	7.1	0.1	6	20	375	389	373	391	0.93
4	19	1.5e-06	0.00012	22.0	1.1	3	23	498	518	496	518	0.97
5	19	0.021	1.7	8.9	0.3	3	23	527	548	525	548	0.91
6	19	0.0099	0.84	9.9	0.0	2	23	563	584	562	584	0.96
7	19	0.00055	0.046	13.9	0.1	1	23	588	610	588	610	0.98
8	19	0.027	2.3	8.5	0.3	1	23	657	680	657	680	0.95
9	19	0.4	34	4.9	0.4	2	23	692	713	692	713	0.91
10	19	1.7e-08	1.4e-06	28.1	3.6	1	23	734	756	734	756	0.99
11	19	0.028	2.4	8.5	2.2	3	23	776	796	774	796	0.97
12	19	9.3e-06	0.00078	19.4	4.8	1	23	817	839	817	839	0.97
13	19	4.4	3.7e+02	1.6	0.1	2	23	855	877	854	877	0.83
14	19	5.7e-05	0.0048	17.0	1.8	1	23	893	915	893	915	0.95
15	19	8.9e-05	0.0075	16.4	0.0	1	23	956	979	956	979	0.95
16	19	8.7e-05	0.0074	16.4	2.1	3	23	991	1011	990	1011	0.97
17	19	1.3e-05	0.0011	19.0	4.8	1	23	1025	1047	1025	1048	0.96
18	19	3.5e-06	0.00029	20.8	0.6	1	23	1062	1084	1062	1084	0.99
19	19	0.00038	0.032	14.4	0.1	1	23	1107	1130	1107	1130	0.95

Sequence Information

Coding Sequence: ATGGATGAGAATACGAACCAGGATTCAGCGATGGAAACCACGAATTCCatctataataattatagcTCGTGTTGTCGATTATGTCTGATGGACAACAGCAACTCCTTGAAACCGATATTCGATGACGAAATGGATGGCGACCAAATTATCGTGGAGAAAATCTTCGACTTCCTCGGGATTGAGGTATCAATTGATGATAAATTGTCCACTATGATTTGTCTAATCTGCATAGATAAGATGGAGACTTGGCACAATTACAAGATTAGCTGCTGTGAGAATCAGACCAAGCTCCAGGGATGGTTGAATgaaatggatccacatgatgATGATATTCACATTAAAAGTGAACCAATAGATGaagatgaggatgatgatgatatgtATGAATTGCCACCATCATTAACACCTCATCCACCAGAATTGAATACTTTCGAAGATATACCAAATGGTAGCATGAGCATAAATGAAACAGGTGTAGTAGACGAAGATTCGCACAATTCGGGTGCAATGTCGGATCATTCGTCTAATGAAGATGACAAATCGATTGAGGATAACAGcgagaagaaacaaaaagaacaagTCGAAGATGTCGAAGCGAACGAGAAAACGGAATACACAGAGACGGACATACAGAAGATACAATTCGCGGCCGGATTGCAATTGAAACAAAGAAATGGCACGACGCCGACGAACATATCGACGTTAATGGGCGAAGGACCTTTGACGAAAGTCGAAGAAGCGTACAAGATTAAATGCCGCAAAATGATAACGATGTTCAGTACGTTGGTGTGCTCTTGTCACGGATATCAGCACAAAACGACGAAACGTTTATTCGCTCATTTGCGTTCCCTTTGTTCATGGTTTCCTGTCTACACTTGCTACAATTGCGTGATAACGTATATCGATCGGTCCTCAAATATGCGACATACGTCACGTTGCCCGAAAAAGTATCTCGAAAACTTGATTAAATTGTCGGAAATAAAGAGGATGCCGGACTTTCGGCATCGTGCATATCAGTTCTACAAGTGCGTTAAGTGCACATACGTCTACGGTTTCTGGGATGATTATTGCGATCACGTCGATGCCGAACACGATGCGGACGAGTTACCGGTCACTTGTAGTTGCGGAAAAGAGTTTAACGATGCCAACGAGTACAGACAACACATCTACAGACAATGTATggtcaatttcttttgcgacATTTGTTTCAATCTAACGCCAACAATCGACGATTTCAAGAAGCATTGCGAAAAGCAGCACGATAACGCCGAAGGATTCCCGTTCTTACCCAATCTTACCGCTTCTACAGATATCAAGGTGGAGTACGATGCGGAAACGTTCAACAATTTCTCGCAGGACGAAGGCGAAACGATCGAATGCGCACCGGACTTGACGTTCGGCAacgataatgacgacgatgacgatttCACCGATTTggaaaagatgatgatgagtcCGATGGATTTGAAGAGTTGGTACTCGAAAACGGCGTGTCCGATTTGCGGTAAAGCATATTCGAATTATCACAACATGTTACGTCATTATAGGACGCACGACGATTCCGAGAAGAACATACCGTGCATTCATTGTCCGGAAAAATTCCGCTTGAAGACGGAACTCAGAGAGCATCTAATAGTGTCGCACGGCGTGGTGGAGAATAAATCGCCTAAAAGCAATTCGTCGCTTCCATGTCCGGAATGTGGGATTATTTTCGGTAGTTTCGAAGAGTGGTCGCAACATAAGGAGACTCACGGTTTACCGTTTACCTGCGGCGAATGCGGTAAACAGTTGGTCTCGCAGGAGGAACTCGATCAGCATCGTAGCgttcatttgaatattaaagTGTTTCGCGATTCGAAGACGCATTCATATAAAAGTACGATGTTAAGTCCGACGACACAAACGGAATACAACGAAATCGAGATAACGGAATTAAATCCGGACGACGGACAAGATCCGTCGAAGAAGTACAATTGCGAGGCGTGCAACAAAACCTATTCCGGTTATGGCGGTCTATGGGAACACAACAAACGCTATCATCCGGAGCGGCGTCCGTCCAAAGATTATCCACGTAAATGCAAGTATTGCGATAAAATCCTAATGTCGGGCGGCGCATATTACATGCACAAACAAATGCACGAGAGATACTCGCAGAATCCTGTCATTAAGCAGGAGATTGACGATTCGGCCGAAACGACGTTTACTTGCAAGATTTGTTTCAAAGTGTTTTCGAACAAATCGAATCTGAAGAGTCACATGAAGACGCATGAAGATGCTGGCGCGAATAGAAGTTTGTCGAAGAGCGGCCGATTGAAAACGTACTGGTGCAATATCTGTCACCAGGCCTGCATCGGTTACGACGAATTGCAGAAACACAAGAAGGAACATATCAAAGAGAACATGACCGAGATGCTGATGAAGGATACGGATCATAATACCGATAAAGATCACGTATGCGACATTTGCCATAAAGTGTTCACGAACAAAGTGTCGCTGAAGAAGCACAAGGAACGACATTTGGACGACACAGAGGAAGAGTATCCGAATAAGAAGTATTATTTgtattgtaaatattgtagGATACCGTTCTTAGATATAGCCGTAATGAATACACATATCGAAACCGAACATAGGAACGAGACGCCGAAAGCGCGACAAAAAGGCAAGAATAACAAGTTCACGTGTAACTTGTGCAAGAAATCGTTCGAAACGTCTGGCGCCCTTTGCTCACATCAAGGCTGGCACAAGAGAGTGAAGTACGAGCATAAAATGGTATACAAGACTAAAGCGCGATTAGCTCAAATGGCAGCGGCCGCCGCATCCGGTGCCACCACCGCAGCACCGACTGGCAGCCACGCAGCAAAATTCAAATGTCCAACGTGTCCGCAATCATTTCCCAACGACACCGCGTTACAGATACACATACTGGAAGCGCATCGGAACATTAACGCGATTCTCATCAGTCCGCATTGCACGGTGTGTCAGAAAGATTTCGAGTCGCAAAGTGCGTTCGAGAAACACATGCAACTGCATAAGATCGTCGAGAAACGACAGAGTAATCAGCAGAAGACGTACTCGTGTAAATTTTGCACGACGACGTTCAGTCGAACGGATCTATTGAACACCCACATACGAACGCATCATAGGGAActgacggcgacgacgacggacgTGCCGCGTACGTTCAAATGCGCTCAATGCAGTCGCGTGTTCGAGAAACAAGCCTCGTTGAACGCTCACATGAAGATGCACGATAAGAATCGACACAACTTGACGGTGTCTTCGTCGACGTCGAGCCAAAAGTACGATCATTACGTTTACACGTGCTCGATTTGTCGGGCCGGTTTCAATTTACCGAAACAGTTGAGACGTCACATCATCGAAGCGCatccgtttaaataa
Protein Sequence: MDENTNQDSAMETTNSIYNNYSSCCRLCLMDNSNSLKPIFDDEMDGDQIIVEKIFDFLGIEVSIDDKLSTMICLICIDKMETWHNYKISCCENQTKLQGWLNEMDPHDDDIHIKSEPIDEDEDDDDMYELPPSLTPHPPELNTFEDIPNGSMSINETGVVDEDSHNSGAMSDHSSNEDDKSIEDNSEKKQKEQVEDVEANEKTEYTETDIQKIQFAAGLQLKQRNGTTPTNISTLMGEGPLTKVEEAYKIKCRKMITMFSTLVCSCHGYQHKTTKRLFAHLRSLCSWFPVYTCYNCVITYIDRSSNMRHTSRCPKKYLENLIKLSEIKRMPDFRHRAYQFYKCVKCTYVYGFWDDYCDHVDAEHDADELPVTCSCGKEFNDANEYRQHIYRQCMVNFFCDICFNLTPTIDDFKKHCEKQHDNAEGFPFLPNLTASTDIKVEYDAETFNNFSQDEGETIECAPDLTFGNDNDDDDDFTDLEKMMMSPMDLKSWYSKTACPICGKAYSNYHNMLRHYRTHDDSEKNIPCIHCPEKFRLKTELREHLIVSHGVVENKSPKSNSSLPCPECGIIFGSFEEWSQHKETHGLPFTCGECGKQLVSQEELDQHRSVHLNIKVFRDSKTHSYKSTMLSPTTQTEYNEIEITELNPDDGQDPSKKYNCEACNKTYSGYGGLWEHNKRYHPERRPSKDYPRKCKYCDKILMSGGAYYMHKQMHERYSQNPVIKQEIDDSAETTFTCKICFKVFSNKSNLKSHMKTHEDAGANRSLSKSGRLKTYWCNICHQACIGYDELQKHKKEHIKENMTEMLMKDTDHNTDKDHVCDICHKVFTNKVSLKKHKERHLDDTEEEYPNKKYYLYCKYCRIPFLDIAVMNTHIETEHRNETPKARQKGKNNKFTCNLCKKSFETSGALCSHQGWHKRVKYEHKMVYKTKARLAQMAAAAASGATTAAPTGSHAAKFKCPTCPQSFPNDTALQIHILEAHRNINAILISPHCTVCQKDFESQSAFEKHMQLHKIVEKRQSNQQKTYSCKFCTTTFSRTDLLNTHIRTHHRELTATTTDVPRTFKCAQCSRVFEKQASLNAHMKMHDKNRHNLTVSSSTSSQKYDHYVYTCSICRAGFNLPKQLRRHIIEAHPFK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -