Basic Information

Insect: Hololepta plana
Gene Symbol: -
Assembly: GCA_963695495.1
Location: OY968838.1:2711081-2714355[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 5.8e-05 0.0049 16.9 2.4 1 23 425 447 425 447 0.97

2 18 0.0014 0.12 12.6 1.0 1 20 453 472 453 475 0.94

3 18 4.6e-05 0.0039 17.3 1.0 1 23 481 503 481 503 0.98

4 18 4.3e-05 0.0036 17.4 3.6 1 21 509 529 509 531 0.95

5 18 1.7e-05 0.0015 18.6 4.6 1 23 537 559 537 559 0.99

6 18 1.7e-05 0.0014 18.6 5.3 1 23 565 587 565 587 0.97

7 18 8.1e-06 0.00068 19.6 6.6 1 23 593 615 593 615 0.97

8 18 6.5e-08 5.4e-06 26.2 2.7 1 23 621 643 621 643 0.98

9 18 4.8e-05 0.004 17.2 6.7 1 23 649 671 649 671 0.97

10 18 1.3e-05 0.0011 19.0 5.5 1 23 677 699 677 699 0.97

11 18 2.9e-07 2.4e-05 24.2 3.0 1 23 705 727 705 727 0.98

12 18 7.5e-06 0.00064 19.7 7.0 1 23 733 755 733 755 0.98

13 18 4.2e-05 0.0035 17.4 8.1 1 23 761 783 761 783 0.98

14 18 1.5e-05 0.0012 18.8 7.4 1 23 789 811 789 811 0.98

15 18 7.2e-06 0.00061 19.8 7.1 1 23 817 839 817 839 0.97

16 18 0.00011 0.0092 16.1 0.2 1 23 845 867 845 867 0.97

17 18 0.017 1.4 9.2 5.1 1 23 877 899 877 899 0.98

18 18 1.1e-05 0.00095 19.2 2.9 1 23 905 927 905 927 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	5.8e-05	0.0049	16.9	2.4	1	23	425	447	425	447	0.97
2	18	0.0014	0.12	12.6	1.0	1	20	453	472	453	475	0.94
3	18	4.6e-05	0.0039	17.3	1.0	1	23	481	503	481	503	0.98
4	18	4.3e-05	0.0036	17.4	3.6	1	21	509	529	509	531	0.95
5	18	1.7e-05	0.0015	18.6	4.6	1	23	537	559	537	559	0.99
6	18	1.7e-05	0.0014	18.6	5.3	1	23	565	587	565	587	0.97
7	18	8.1e-06	0.00068	19.6	6.6	1	23	593	615	593	615	0.97
8	18	6.5e-08	5.4e-06	26.2	2.7	1	23	621	643	621	643	0.98
9	18	4.8e-05	0.004	17.2	6.7	1	23	649	671	649	671	0.97
10	18	1.3e-05	0.0011	19.0	5.5	1	23	677	699	677	699	0.97
11	18	2.9e-07	2.4e-05	24.2	3.0	1	23	705	727	705	727	0.98
12	18	7.5e-06	0.00064	19.7	7.0	1	23	733	755	733	755	0.98
13	18	4.2e-05	0.0035	17.4	8.1	1	23	761	783	761	783	0.98
14	18	1.5e-05	0.0012	18.8	7.4	1	23	789	811	789	811	0.98
15	18	7.2e-06	0.00061	19.8	7.1	1	23	817	839	817	839	0.97
16	18	0.00011	0.0092	16.1	0.2	1	23	845	867	845	867	0.97
17	18	0.017	1.4	9.2	5.1	1	23	877	899	877	899	0.98
18	18	1.1e-05	0.00095	19.2	2.9	1	23	905	927	905	927	0.98

Sequence Information

Coding Sequence: ATGAACACTGAGGAACAGAACCAACTTTCGGGCAACCATCAGCAGGATTCCACTAACGACGCTGCAGCAAGACCTCCACCACCTACTACCACGATACCGACTGATTTACGTGTAAATACCACAGCATTGAATGCAGTGACTTTAAGTAGTGTTGCAAAATATTGGGTGCTAACAAATTTATTGCCCGGCCCAATTCCTCAAGTGTCTGTATACGGATTGCCTGGGTCCACAAGGTCAGAGAATCAATCCAAGTTTTCCCAAGATGGTATGCTGAGTCAGCACACTGGCTTGTTACAAGGTGATCCTTTGTTGCTTCAACACAATTCACAAATACCTGTTAGCATATCCACATCACAGGGTATTACCAATTTAACGATTCCAACTAGTTCCATGCATGTGACAAATGATAATAACCAGCAGAACCATGGTCAGATTAGTAACCATCAACAAAATGAGCATATGGTGAATCAATCACAAAATCAAATGAATGATTCTCAAATGAATTCCCAACAGAACCATAACAATCAACAGAGTTTGGTACAAGTTCAAGTGGAAGATAATCTGGTTTCTGTGATTGAGGATAGCAAGGATCAAAAGGAACTGATTGCATCGCAGTTGGCACAAGCGCAATTGCACATGAACGACACTCAACAACTtggacaacaacagcagcagcagcaacaacaacaacaacaaacgatgACGGTACAACAGTTGCAACAATTGCAGGTGCAACAAGTACTGGATAATGTCGTTCGAATGGAGGGTGGCGTGGAGAATTCGCAAAATCATCCGAACAACGCCGATCTGACCGATAATTTGATCATCAAGGACGAGAAAGGTTTAGCGAATTGCGCGAAACCTTCGTTTGGCACGCAAGAGATCCGTTCGGGCGACGGAAGCGTAGTCAAGATATCCGCGATTCAAGATCAGGAATTGGCTAAATCGTTGGGCGTCGAAATGGTGCAGAACATGTATAAGGTGAACGTGGACGATATCAATCAGTTGTTGGCCTATCACGAGGTGTTCGGGAAACTGCAAGGCGGCGACATCAGCACCAGCCAAACCAGTCTCATACAGAACGTACACAgtacgacgacaacaacgacgacgacggccgcTCTGAACGTTCATCTACAACAATCGACGACGAGTAATAACGTGTCGAACAGCGTGGTCATTCCAACGACGAAACCGCTATTAGATCCGGACCATGCTCACGCGACGAGCACGATCGCAACGGACGGCCCGCCTCCGATCATGAGTGCGGACCACGTGTGCGACTTGTGCGGCAAAATGTTTCAGTTCCGGTACCAGTTGATCGTCCATCGACGCTACCACACCGAACGTAAGCCGTTCACTTGTCAAGTGTGCGGCAAAGCGTTCCTCAACGCTGCCGAACTGACGCGGCACGGTAAGTGTCACTTGGGCGGTAGCATGTTCACGTGCGCGATCTGTTTCCACGTGTTCGCCAACGACGCTTCCTTGGAGCGACACATGAAGCGACACGCGACGGAGAAACCGTACAATTGCACCATATGCGGCAAAGCGTTCGCACGCAAAGAGCATCTGGATAATCACACACGGTGCCATACCGGCGAGACGCCCTACAGGTGTCAGTATTGTGCGAAGACGTTCACGCGTAAAGAGCACATGGTCAATCACGTGCGTAAACATACCGGCGAGACGCCGCACCGATGCGAGATCTGCAAGAAGTCGTTCACGCGTAAAGAGCACTTCATGAACCACGTGATGTGGCACACAGGCGAAACGCCGCATCATTGTACCGTTTGCGGGAAGAAATATACGCGTAAGGAACATCTAGCGAATCACATCCGGTCGCACACGAACGACACGCCGTTCCGTTGCGAGATTTGCGGTAAATCGTTCACGCGCAAAGAACATTTTACGAATCACATCATGTGGCACACGGGCGAGACGCCCCATCGATGCGACTTCTGCTCGAAGACGTTTACGCGTAAGGAGCATCTCTTGAATCACGTGCGCCAGCATACGGGCGAATCGCCGCATCGCTGCGCCTATTGCTCGAAATCGTTCACCCGCAAAGAGCATCTCGTCAATCACGTGCGACAGCACACCGGCGAGACGCCGTTCCGTTGCACGTACTGTCCGAAAGCTTTCACGCGCAAAGATCATCTCGTCAATCACGTGCGACAACACACCGGGGAATCGCCGCACAAGTGCGGTTTCTGCACGAAATCGTTCACGCGCAAAGAACACCTGACCAATCACATTCGTCAGCATACCGGCGAGTCGCCGCATCGATGCCATTTCTGTGCGAAATCGTTCACCCGCAAAGAGCATCTCACCAATCACGTACGCATCCACACGGGCGAATCGCCGCACCGCTGCGAATTCTGTCAGAAGACATTCACGCGCAAAGAGCATCTGATGAACCATCTCAGACAGCACACGGGCGAGACGCCGCATTGCTGTAACGTTTGCTCGAAACCGTTCACGCGCAAGGAGCATCTCATCAATCACATGCGATCGCACACGGGCGAGCGACCGTTCGCGTGCGGCGAATGCGGCAAATCGTTCCCGCTGAAAGGCAACTTGCTGTTCCATCAACGGTCGCACAATAAGGGCGCCGCCGCCGAACGACCGTTCCGCTGCGACCTGTGCGACAAGGACTTCATGTGCAAGGGCCATCTCGTCTCGCATCGCCGATCCCACAGCGGCGAACGACCGCACCAGTGTCCGCAGTGCAGGAAGACGTTCGTCGAGAAAGGTAACATGCTACGCCACTTGCGGAAACATCAGGCGGACGCCGCGCAACAGGGGCAAGTGATAATCGCCACGCCTGTTGTTccacaacagcaacaaacggCACAACAGCAacaccaacaacagcaacaatctcaacagcagcagcagcaccaacaacagcaacaatctcagcagcatcaacaacaacagaacgCGACTCCGGTCGTGCAAACGTCGACGCCCAGCATTCAGGTGCCGCAAGTGAGCCAAACGCAAACGCTACCGAGCCAAGTAGCGTCCATGAATATCGTGCAACAGCAGCATCTGTCGTTAcaccagcagcaacagcagcagaaTAATCATGCGGTGCCTACTGCTAATGCAAACGTATTGTCCAGTTACTGA
Protein Sequence: MNTEEQNQLSGNHQQDSTNDAAARPPPPTTTIPTDLRVNTTALNAVTLSSVAKYWVLTNLLPGPIPQVSVYGLPGSTRSENQSKFSQDGMLSQHTGLLQGDPLLLQHNSQIPVSISTSQGITNLTIPTSSMHVTNDNNQQNHGQISNHQQNEHMVNQSQNQMNDSQMNSQQNHNNQQSLVQVQVEDNLVSVIEDSKDQKELIASQLAQAQLHMNDTQQLGQQQQQQQQQQQQTMTVQQLQQLQVQQVLDNVVRMEGGVENSQNHPNNADLTDNLIIKDEKGLANCAKPSFGTQEIRSGDGSVVKISAIQDQELAKSLGVEMVQNMYKVNVDDINQLLAYHEVFGKLQGGDISTSQTSLIQNVHSTTTTTTTTAALNVHLQQSTTSNNVSNSVVIPTTKPLLDPDHAHATSTIATDGPPPIMSADHVCDLCGKMFQFRYQLIVHRRYHTERKPFTCQVCGKAFLNAAELTRHGKCHLGGSMFTCAICFHVFANDASLERHMKRHATEKPYNCTICGKAFARKEHLDNHTRCHTGETPYRCQYCAKTFTRKEHMVNHVRKHTGETPHRCEICKKSFTRKEHFMNHVMWHTGETPHHCTVCGKKYTRKEHLANHIRSHTNDTPFRCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCAYCSKSFTRKEHLVNHVRQHTGETPFRCTYCPKAFTRKDHLVNHVRQHTGESPHKCGFCTKSFTRKEHLTNHIRQHTGESPHRCHFCAKSFTRKEHLTNHVRIHTGESPHRCEFCQKTFTRKEHLMNHLRQHTGETPHCCNVCSKPFTRKEHLINHMRSHTGERPFACGECGKSFPLKGNLLFHQRSHNKGAAAERPFRCDLCDKDFMCKGHLVSHRRSHSGERPHQCPQCRKTFVEKGNMLRHLRKHQADAAQQGQVIIATPVVPQQQQTAQQQHQQQQQSQQQQQHQQQQQSQQHQQQQNATPVVQTSTPSIQVPQVSQTQTLPSQVASMNIVQQQHLSLHQQQQQQNNHAVPTANANVLSSY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -