Basic Information

Insect: Hololepta plana
Gene Symbol: ham_1
Assembly: GCA_963695495.1
Location: OY968838.1:8254544-8256169[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 4.8e-06 0.0085 15.8 0.1 15 41 287 310 276 312 0.81

2 4 4.7e-06 0.0083 15.8 2.1 17 44 317 341 310 341 0.88

3 4 0.097 1.7e+02 2.0 1.4 14 41 343 367 340 369 0.82

4 4 3.3 5.8e+03 -2.9 0.0 33 40 428 435 420 435 0.79

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	4.8e-06	0.0085	15.8	0.1	15	41	287	310	276	312	0.81
2	4	4.7e-06	0.0083	15.8	2.1	17	44	317	341	310	341	0.88
3	4	0.097	1.7e+02	2.0	1.4	14	41	343	367	340	369	0.82
4	4	3.3	5.8e+03	-2.9	0.0	33	40	428	435	420	435	0.79

Sequence Information

Coding Sequence: ATGAATCTGGTGGAACCGGGCCTACCGTGGCTCAGATATCTGCCTCCGTTGCCGTTGACCGCACCGCTGCTAACAAcgatgagagagaaagactcGTCGCCGAGGAAGATGCTGGTGGCCGCGAGCGGTCACAGTTCGCCGAAGCAGGCGGCCGTCTATCCGCTGACGGTGCGCGTGCCGCccgtggacgacgacgacgacgacgaaccgTTCGACTTGTCGCGGAACACGCGGTCGCCGGGACCGCACATGTCGCCGGCGGGCCGGCCGCCGACGGGGCCGCAGGACGCTAAGGAGGAACCGTTGGACTTGCGCGTCGAGCACAAGAAACTGTCGCTGATGATAATGCGGCGCCAGGTGGAGGACGAGAATCGCAACTTGATCTCGCCGTCGCCGAGTGTCGGTAGTGAGAAGGACGACGATGTGACCGCGGAAGAGAGAACTAGTCCGGTTaatgtgaataataataataataatagtactcataacaataataataataataataatagcgcgAAATCGTTTAGCCCGCAAATTCCGAACTATCCGGTGTTGTTCCCCCAGCAGCCGTTGCACCCGATGATGTTGGAGAACATCTATCGGATACAGGGGGGCGACAAAGTGCCGCGCTTGCCGCTGTCCTATCCGAACTCGCCGCCCGGCTACCTGCAGCGCTACCCGTTCTTAAATCACAATCTGCTGAGTCCGCCCGTCAGTCAAGTACCTTTCGATATAGCGTTACGCGGCGGCAATCCGGCGCAAGCGGCCgcacaacagcagcagcaacagcaaccgCCGCAGCACAATCAGCAAACGGCGACGAACAAAGTGTACGCGGACGCGGCCGGCAAGATGAAGGACCGTTACGCCTGCAAGTTCTGCGGCAAGGTGTTCCCGCGCTCGGCCAATCTGACGCGACACCTGCGGACGCACACCGGCGAGCAACCGTACAAGTGCCGTTACTGCGAGCGGTCGTTCAGCATATCGAGCAACCTGCAGCGGCACGTGCGCAACATACACAACAAGGAGAAGCCGTTCAAGTGTCCGCTGTGCGAGCGTTGCTTCGGGCAGCAGACGAATCTCGACAGGCACTTGAAGAAGCACGAATCGGACGGACCGACGATCCTAGACGAACGCGCaaccggcggcggcggcggcggcggcgccggTGGTAACGCGCAAAGACGTAACATGAGCCATCACCATCACAACCATCACCGTAGCATAACGGACGAGTCGTACTTCGAGGAGATCCGGACGTTCATGGGCAAAGTGACCGACACGCGACTGTTGCAACATCTGCAGCCGCCGAAGGCGTTGCCGAGCTTCCCGATCACGCTGTCGCCGAGTCTCTACGACGTGGcgaagcagcagcagcagcatcagcagcagcagcatcaacagcagcagcagcacgaGAAAACGGCGTCGACGTCGCCGGACGACAACAAACGGGACTCGTCGTATTTCTCCGACAAGGACAACTTCTCGTCgcgatcgtcgacgacgtccgAAACGTCGACGACGCAGAAGGACGACGAGAATCACGAGGAGACGGCGATGGAGGCGACGAAACGGCTGGATAACGTCAAAGAGGaaccgaacaacaacaacaataataccTGA
Protein Sequence: MNLVEPGLPWLRYLPPLPLTAPLLTTMREKDSSPRKMLVAASGHSSPKQAAVYPLTVRVPPVDDDDDDEPFDLSRNTRSPGPHMSPAGRPPTGPQDAKEEPLDLRVEHKKLSLMIMRRQVEDENRNLISPSPSVGSEKDDDVTAEERTSPVNVNNNNNNSTHNNNNNNNNSAKSFSPQIPNYPVLFPQQPLHPMMLENIYRIQGGDKVPRLPLSYPNSPPGYLQRYPFLNHNLLSPPVSQVPFDIALRGGNPAQAAAQQQQQQQPPQHNQQTATNKVYADAAGKMKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCRYCERSFSISSNLQRHVRNIHNKEKPFKCPLCERCFGQQTNLDRHLKKHESDGPTILDERATGGGGGGGAGGNAQRRNMSHHHHNHHRSITDESYFEEIRTFMGKVTDTRLLQHLQPPKALPSFPITLSPSLYDVAKQQQQHQQQQHQQQQQHEKTASTSPDDNKRDSSYFSDKDNFSSRSSTTSETSTTQKDDENHEETAMEATKRLDNVKEEPNNNNNNT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00807880;
90% Identity: iTF_00807880;
80% Identity: iTF_00807880;