Hpla002055.1
Basic Information
- Insect
- Hololepta plana
- Gene Symbol
- bab2
- Assembly
- GCA_963695495.1
- Location
- OY968831.1:4444518-4446445[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.9e-16 6.9e-13 47.8 0.2 1 45 385 429 385 429 0.97
Sequence Information
- Coding Sequence
- ATGGGGAGCGCAGCCCAGCAATATTGCCTGCGATGGAACAACCATCGTTCGAATTTGCTCACCGTCTTCGACGAATTACTGCAGAACGAAGCGTTCACGGACGTCACGTTGGCCTGCGACGGCGGTGGCCCGATAAAGTGCCATCGAATGGTTTTAGCCGCTTGCTCGCCATATTTCCAAAGTCTATTCACCGATCTCCCGTGCAAGCATCCCGTCGTCGTCTTGAAAGACGTCAAGTACTGCGAGATCAAAGCAATATTGGAGTATATGTACAAAGGCGAGGTAAACGTCGCCCAAGACCAATTGGCCGCGTTACTTAAAGTGGCGGAAGCGCTAAAAGTGAAGGGACTAGTGGAGGAGAATCGCGGCGGCGACGGCAACAGCGgcatcggcggcggcggcggcaacggtggcagcggcggcggcggcggcagcagcagcggtAGCAGACGCGACGAGGACGAGGTCATGCAAAACTCGCCGCCGAGTATCAGCACGTCGACGCCGAACTCGCACAGTAACGTGCACAGTAGCAGCAACAGTTCGCCGCCGCATTCGACGAACGGCTTTCATTTCGCGAAGAACCCGTACAGCATATACGGGAAATCGTCCGGCGTCGAGCGCGGCGCGCGGATGAACATACCGATGTGGGCCGTTCCCGGTTTGCCGTTGCCGCATCATCCGTCGCCGATACCGTCGCAGAATCACCCGCacgcggcggcgacggcggccgCGGCGGTCTTGAGCAGTTGCTACGAGGCCGCGAACGAGGTGATGTCGCCGTTGAAGCGAAAGAAACTCTCCAGTTTGCTCATGAATCGGGACACGCCGATCCTGAGGACCGTCTTGGGACAGGGGCAGGGCCAAGCGGACTCCTCGCAACCCGTCAGTCTAGTGTGCCATCCGGACAGTCACGAGAGTCTGCATTCGAACAATTCGGACCTGCTGCGACAGGATAAGCACATAAAAAACGAACCGTCCGAAGATGCTCAATCGCCATACACGGACCTGTCGATgatggacgacgacgagaagcCGAAGATGGGCcttccgtcgtcgtcgccgcaaTCGTTCTCCGGCGAGATGCGTGGCGGCGGAATAGCGAGGTGTCTACCGACGCAGCGACCCGATTGGAAGCGATACAAGCAGTACACGCGAGAGGAAATAATGGCCGCGATCGAGGCCGTGCGTAACGGGATGTCAGCGTTGCAAGCGGCGCGAACTTACGGCGTGCCGTCGCGTACCTTATACGACAAAGTGAAGAAGATGGGCATAACGACGAGTCGACCGTTTAAGCGCGGCTCGAACGGCAGCGGCGGCCGCTTCCCGTACGGCCTCAGCGGCACGAATTCGCCGTACGGCGGCCACCTGTCCGAGTCCGAAGAGCACGCGCTCAACAATAACAGCGCGTTGCTGGAGGCCAGCCATTTCCTGCAGCACGCGCTCGACAGTCGCGGCGGCGACGAGCGGGAAGCGCTGGCCGCGATGGCGGCCGCGGCGGCAGCGCAAGCGGCCGTCTCCGGCCACTCGACGTCGCCGTCGAATCTCCACAACATGGCGCGCAGCCCGAGTCCGAGTCCGACGTTGCTGAAGTACATGCGACAGAGCAGTCTGACGCCGTCGCCGGCGCCGGGCAGCGATAATCAGTTGAGCGAGACGAACGGCAGCTCGGAGCGGgaccgcgacgacgacgacgaccaggTGGAGGACTTGTCGGTGTCGCGGAAGCACGAGACGACGCGGGTGATAATGCCGCCGATGAATCAAGTGTCGACGATCAAGATCAAAGAGGAGACGATGCGGGACGTCATGTTGAGGGAGGACATGCGAAGAGAGGTAAGCGTTGACGAAGCGGAATAG
- Protein Sequence
- MGSAAQQYCLRWNNHRSNLLTVFDELLQNEAFTDVTLACDGGGPIKCHRMVLAACSPYFQSLFTDLPCKHPVVVLKDVKYCEIKAILEYMYKGEVNVAQDQLAALLKVAEALKVKGLVEENRGGDGNSGIGGGGGNGGSGGGGGSSSGSRRDEDEVMQNSPPSISTSTPNSHSNVHSSSNSSPPHSTNGFHFAKNPYSIYGKSSGVERGARMNIPMWAVPGLPLPHHPSPIPSQNHPHAAATAAAAVLSSCYEAANEVMSPLKRKKLSSLLMNRDTPILRTVLGQGQGQADSSQPVSLVCHPDSHESLHSNNSDLLRQDKHIKNEPSEDAQSPYTDLSMMDDDEKPKMGLPSSSPQSFSGEMRGGGIARCLPTQRPDWKRYKQYTREEIMAAIEAVRNGMSALQAARTYGVPSRTLYDKVKKMGITTSRPFKRGSNGSGGRFPYGLSGTNSPYGGHLSESEEHALNNNSALLEASHFLQHALDSRGGDEREALAAMAAAAAAQAAVSGHSTSPSNLHNMARSPSPSPTLLKYMRQSSLTPSPAPGSDNQLSETNGSSERDRDDDDDQVEDLSVSRKHETTRVIMPPMNQVSTIKIKEETMRDVMLREDMRREVSVDEAE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00807719;
- 90% Identity
- iTF_00807719;
- 80% Identity
- iTF_00807719;