Hpla010985.2
Basic Information
- Insect
- Hololepta plana
- Gene Symbol
- bab1
- Assembly
- GCA_963695495.1
- Location
- OY968840.1:3180260-3191068[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.9e-12 4.1e-09 35.7 0.0 1 39 493 532 493 536 0.90 2 4 1.2e-12 1.7e-09 36.9 0.1 1 39 547 585 547 588 0.95 3 4 3.9e-17 5.6e-14 51.3 0.0 4 45 605 647 602 647 0.96 4 4 8.7e-17 1.2e-13 50.2 0.0 1 40 654 694 654 698 0.92
Sequence Information
- Coding Sequence
- ATGTCCGGACAGCATTACTGTTTGAGATGGAACAATTACCAAAGTAACATGACCTCCGTGTTCCATCAGCTGCTGCAGAACGAGGCCTTCGTGGACGTCACGCTCGCGTGCAACGATCTATCGTTGAAGGCGCATAAAGTGGTCCTCTCGGCTTGCTCGTCGTACTTCCAGAAGCTGCTGCTGGAGAATCCGTGCAAACATCCGACGATCATCATGCCGCAGGACGTCTGCTACGACGACCTGAAGTTCATCATCGAGTTCGTCTATAAGGGCGAGATCGACGTGTCGCAGACGGAATTACAGTCGTTGCTGAAGACGGCGgatcaattgaaaattaaaggtCTCTGCGAAACGCCCGATGAGACCGAAACCGAAGAAGCACTGCCACCGCTAATAAACCCGTCGACGAACATCGGCACGGGCCACAATCGGAGGACGCGAagattgtcgtcgtcgtcgtcgtcgcaatcCCATCGGTACCTGGACCACAAGAGGCACAAGTACAGACGGGTCGAGAGGGAGAACggtttgaataataataataacaacaacaacagtggTAGTGTTAGTGGTGGTTGTGTTGCGTCGCTGGAGGAAGGAGACGTGGTGGAGGACGAAGAGGCGGACGTGGAGGTGGTGGATAAGGAGGATAAGGATCTGAGAGACGGTGATCGCGATAGCATCGATAACAAAGAGAGGGACAATGAGAAGAAGAGTGACGATGATAGGGAACTAACGGTGCCGTTGTCGGACGATAGGAATTCGAATGTGAGCTATAGTGAacgcattaataacaataataacgttaataaaaatcgagAAGAACGAGAGGAAGCGGACGAAGAGCGTAGACAACATACTGATGAAGACAATAATGATATGCCAATAGCTCTTGATGACGAACGTAAAAGACGTAAAACTCATcatcacaacaacaacaataacattcaTAACCAGTGCAAACCCCTCAATATGAGCAACCATGCGCTATTAGGAGGGCAGCCTGTATTCACGCAATTCGGTATAGACTCTGACGACTTTCCGCCGGATCCACCAGCGCCGACGGCCACCCCTGTTGGTAACATTGAAATGCAAGATCATTCGCCTACGAGAACGCTATTCACTAATACGATACACAGAACCGATTTATCAGATTCCCATTTAAAATTTAGCGAGATCAAGAAAGAGAACGAGATCAAATTGGAAACGCTACGCTCGTCGTACGATCAGGAATCGATTTTGGAGATGGACACCGGCCACATGTCCGGCCCCGATCATTCGATGGACAGCCACGACGGCTCCGAGCACGGCATGCacacgatgatgataacgCCGGAACTGATGGGGTTCTACCGGCTGACGGAAGCCGGCTGCAAGGACTTGTTGAAATCGAACGGCCACGCCGAGCATCACATGGACCGATCGcatcaccaccaccatcatcacggcagcggcggcggcgggcCGAAGACGTGGACGCAAGAGGACATGGAACTGGCGTTGGACGCGCTTAGAAATCATAACATGAGCTTGACGAAGGCTTCCGCCACCTACGGCATCCCGTCGACGACGTTATGGCAACGGGCCCATCGACTCGGCATCGACACGCCGAAGAAGGAGGGCCCGAACAAGTCGTGGACGGAGGAGAGTTTGAATTCGGCGCTGGACGCGTTGAGGACCGGCACGATATCGGCGAACAAGGCCAGCAAGGCTTATGGCATTCCCAGCAGTACCTTATACAAGATAGCGCGGAGAGAAGGTATCCGATTGGCCGCGCCGTTCAACGCCGCGCCGACGACGTGGTCGCAAAAGGACCTCGAGAAAGCGCTGGACTCGATCCGATCGGGGCAGACGTCCGTGCAGAAGGCGTCCACCGAGTTCGGCATACCCACCGGCACGCTGTACGGCCGTTGTAAGCGCGAGGGCATCGAGCTGTCGCGGTCGAATCCGACGCCGTGGTCCGAGGACGCGATGGGCGAGGCCCTCGAGGCGGTTAGATTAGGACACATGTCCATAAATCAAGCGGCCATCCATTATAATTTACCGTACTCGTCGCTCTACGGACGGTTCAAGCGCGGCATCAAGTACGAGACGGAGAGCGTCGATCACAATTCGGACAGTCAGTCGCAGTTGGACGGCCAGATCCATCCGATGGACTACGTGACCGCGCATCACGCGTTACCGCCGTATCCGCCGCagccgtcgccgtcgcctcAGCATCATCTTCAGCACTCGCCGcatcagcagcaacagcaaccgCCGtcgcaacagcaacaacggcagcagcagcatcatcagcagcagcagcatcatcagcAGCGACAACCAAATAGCTGA
- Protein Sequence
- MSGQHYCLRWNNYQSNMTSVFHQLLQNEAFVDVTLACNDLSLKAHKVVLSACSSYFQKLLLENPCKHPTIIMPQDVCYDDLKFIIEFVYKGEIDVSQTELQSLLKTADQLKIKGLCETPDETETEEALPPLINPSTNIGTGHNRRTRRLSSSSSSQSHRYLDHKRHKYRRVERENGLNNNNNNNNSGSVSGGCVASLEEGDVVEDEEADVEVVDKEDKDLRDGDRDSIDNKERDNEKKSDDDRELTVPLSDDRNSNVSYSERINNNNNVNKNREEREEADEERRQHTDEDNNDMPIALDDERKRRKTHHHNNNNNIHNQCKPLNMSNHALLGGQPVFTQFGIDSDDFPPDPPAPTATPVGNIEMQDHSPTRTLFTNTIHRTDLSDSHLKFSEIKKENEIKLETLRSSYDQESILEMDTGHMSGPDHSMDSHDGSEHGMHTMMITPELMGFYRLTEAGCKDLLKSNGHAEHHMDRSHHHHHHHGSGGGGPKTWTQEDMELALDALRNHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPNKSWTEESLNSALDALRTGTISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWSQKDLEKALDSIRSGQTSVQKASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGIKYETESVDHNSDSQSQLDGQIHPMDYVTAHHALPPYPPQPSPSPQHHLQHSPHQQQQQPPSQQQQRQQQHHQQQQHHQQRQPNS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00807725;
- 90% Identity
- iTF_00807725;
- 80% Identity
- iTF_00807725;