Basic Information

Gene Symbol
ct
Assembly
GCA_963695495.1
Location
OY968841.1:1404076-1418052[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.4e-27 5e-24 83.8 0.0 2 72 394 465 393 470 0.95
2 3 3.7e-32 1.3e-28 98.5 0.0 3 77 808 883 806 885 0.96
3 3 2.2e-30 7.9e-27 92.8 0.0 3 75 1050 1123 1048 1127 0.95

Sequence Information

Coding Sequence
ATGATAACGGATCGGAACGGGATCGACGAAAGCATAGCTCAATTACTGGAAGAAGTACAAAGACTGCAGGTGACGATCACGAAACTGCAGGAATCGTCGCTGACGCAGATCACCAGGTTGGAGGAGCAATTGGAGCAGAAGCGGCAGCAGATCGCGCGGCTCGAGGTGAAGCTGGACGTGCAAAAGGACTACGAGGAGATCAAGCGCGAACTGAGCATTTTCAAGTCGCGGGACCTCTCGCTGTCGAGTCAAGAGTGCAAATTGCTCGGCGACGCCGCCGCGGACAAAGCGATCGAATCGGCGCCGGAGCAATCGCCGACGAACGATAACGAAGGTTACGACGGCGCCGCATCGAAACCGATCGaaacgccgccgccgccgtcgtcacAATCGATAGCGTTACCGCCGCGTTTGCCGATAAGCTCGCCGCAAAACGCGTTGCCGCCGCCGTTTCAAAACGTCGAAACGTTCGGCTCCCTGCTCGGCGAAGAGATCGTGGCCGATTGGCGACGTAATATTGACCCAATTAGTCTCATTAATAACAGCCGCCCAATAATAATTCCCTCACCATCCGCAGATGGACCGTtagcattatcatcatcatcaacatcgacgacgacgtcgacggcatcgacgacgacgacaacaacaacaaccgcatCGACGACAACCTtatcgacgtcgtcgtcatcgactACGACGGCGAGCACGACGCCGCTGACCGTCGCCGACTCGACGGTGAAGAGCGCGGCGTCGACGCCGCAACCGGACTTGCAACAACCGCACGCGTCGCCGACGACGTTGCTCATAAACGGCAGCAGCAACCGCGAAACGCCCGAagacaataacaatttacacgtgggcaacaacaacaacaacacgctACCGTTGGCGCAAATGTGCGCCGTTCAAACGTACTTGCGGAACGAGGACGCGCTGAAAGGATCGTATCGATTCGACGATCAACAACCGCTGCCGCCgcaccatcaccatcaccagcagcagcagcagcagcaacaacagtcGCACCATCGATCGCCGTCGTTTCGCTTCGCCGACGACCTCGGCATGGCGCCCGGCTCGATGCTGCCGCGATTGGGCGAGAGCCTGATACCGAAGAGCGACCCGATGGAGGCGAAACTCCAGGAGATGCTGCGCTACAACATGGACAAGTACGCGTCGCAGAACCTCGACACGTTGCATATCGCGCGGCGCGTCCGCGAACTGCTGTCGATCCACAACATCGGGCAGCGGCTGTTCGCCAAGTACATCCTGGGCCTGTCGCAGGGCACCGTCAGCGAGCTGCTGTCGAAGCCGAAGCCGTGGGACAAGCTGACCGAGAAGGGGCGCGACAGCTACCGCAAGATGCACGCGTGGGCCTGCGACGACAACGCGATCATGCTGCTGAAGTCGCTCATCCCGAAGAAAGACAATTTTTCCTCAGGCAAAGAAACGGGCGGCATCCCGTCGTTCGGCCGCCCCGACGCCGACCTGACCGAGGAGCGGATCGCGCACATCCTCAGCGAGGCGTCGCAGATGCAGATCAAGTCGGCGTCGAACAACCAGACGTCGTcctcgatgacgatgatgatgatggaggacAGTCGCAGCAACGACGACTCCAAGTCGCCGCACGGCGGCTGCTCGAGCCCGTACTCGAAGGAGTCGTCGCAGAATCGCCGCCTGAAAAAGTACGAGAACGACGACATCCCGCAGGAGAAGGTCGTGCGCATCTACCAGGAGGAGCTGGCGAAGCTGATGGGCCGACGGATGGACGATCTGCGGAATCCGCGCGAGCAGCAACCGTTCCCTGGCATCTTCTTTCCGCAACTGTTCAGCGGCGGCGGTCCGATGGATCGCACGCAAGAGGAGATACGCATCGCGCTGGACGCGTACCATCGCGAGATCGTCAAGCTCAATCAGGTGCAGACGAACCCGTCGCAGATGCCCAACATCAGCCTGCTGGCGTTGCAGCAGCAAGCGTTGGCGCAGCACTCGCAGGCCGCCGCGGCGCTGAACGGCGGCGTGCAGGACCTGTCGCTGCCGAAGGAGAAGCCGTCGAGGTCGGAGAACGGGCTCGAGGCGAAGGAGAAGGACGAGATCGATCGCAACGGGTCGTCGGCGGGCAGCGCGTTCAGCCTGGTGCGGCCGAAGCTCGAGCCGGGCACCGCGCAATCGCAACAgaccggcggcggcggcggttcgACGACGTCGAGCCCCCTCGGCAACGCGATTCTGCCGCCGGCGATGACGCCCACCGACGACTTCGGCACGTCGGCGACGGCGAGCCCGCTGCAGCGGATGGCGTCGATCACGAACTCGCTGATCTCGCAGCCGCCGACGCAGCCGCATCACGCGTCGTCGCAGCGGCCGCTGAAAGCGGTGCTGCCGCCGATCACGCAGCAACAGTTCGACCTGTACAATAATCTGAACACGGAGGACATCGTGAAGAAGGTGAAGGAGCAGCTGAGCCAGTACTCGATCAGTCAGCGGCTGTTCGGCGAGTCGGTGCTCGGCCTGTCGCAGGGCTCCGTCAGCGATCTGCTGGCGCGCCCGAAGCCGTGGCACATGCTCACGCAAAAGGGCCGCGAGCCGTTCATACGGATGAAGATGTTCCTCGAGGACGACAACGCCGTGCACAAGCTGGTCGCGAGCCAGTACAAGATCGCGCCGGAGAAGTTGATGAGGACGGGCGGTTACGGCGGAACGTGCACGTCGGCGATCGTGAAACCGATGCCGCCGACGCCGAAGATGATCAGCGAGGCGGCCGGCCTGATCAACAAGATGCAGCAGGACACGCAAAGCCTTCTGCCGCCGTCGCTGCAGTTGGGGCCGCCGCCGCAACTGAGCAGCGGCCAATCGTCCGCCTCCTCCTCGATatcatcgtcctcgtcctcCGTCGCGGCAGCCaaccaacagcagcagcagcagcaacaaacgCCGTCGACGATGCTCTTGACGCCGCCCGGCGTCCCTCCGCATCACGCCATCAACATCCAAAACCCCGGCGACGtgccgacgacgacgccgaagaAGCCGAGTCCGCACGGCCTCGTGCCGCACTCGCCGATGGGCCAGCAGCCGACGGCGATGCGCAGCCTCCACCAGCACATCTCGCCGAGCGTCTACGAGATGGCCGCCCTCACGCAAGACCTGGACACGCAAGTGATCACCACCAAGATTAAGGAGGCGCTATTGGCCAATAACATCGGGCAAAAGATCTTCGGGGAAGCGGTGCTCGGCCTGTCGCAGGGCTCCGTCAGCGAGCTGCTGTCGAAGCCGAAGCCGTGGCACATGCTGAGCATCAAGGGCCGCGAGCCGTTCATCCGCATGCAACTCTGGCTGAACGACGCGCACAACGTCGACCGCCTGCAGGCGCTGAAGAACGAGCGCCGCGAGGCGAACAAGCGGCGCCGGTCGAGCGGTCCGGGCGCGCACGACAACAGCTCGGACACGTCGTCGAACGACACGTCGGAGTTCTACCACTCGAACTCGCCGGGGCCGGGGCCGCCGTCGGCGAAGAAGCAGCGCGTCCTCTTCAGCGAGGAGCAGAAGGAGGCGCTACGACTGGCGTTCGCCCTCGACCCGTATCCGAACGTCGCGACGATCGAGTTCCTGGCGAACGAGCTCGGCCTGTCCAGCCGCACGATCACCAACTGGTTCCACAACCATCGCATGCGACTGAAACAGCAGGTGCCGcacggcggcggcgtcggcggcggcggcgccaTCCCGACGGACGTGCCGCCGCGCGACCAGAGCGGCAACCAGGCGCCGTTCGATCCGGTGCAATTCCGCCTGCTACTCAACCAAAGACTGTTGGAGCTGTCCAAGGAGCGGCTCGGGCTGACCGCCGTGCCGCTCGCCTATCCGCCGTACTTGGCGGCGAACACGACGAACCTCGCGGCGCTGATCGGCCGCGGACTGCTGCCGTCCGCCGAGATGGACCTCGCCGCGCTGAACAGCGCCGTCAAGGAGCAGATGAGCGGGCTCGATCTGTCGATGACGACGCTGAAACGGGAGCCGGGCGactacgacgacgaggaggaggacgtCGAGAGCAACGTCGGCTCCGAGGAGGACTCGAACATGAGCGCCGGCAGTTTGCCGATCAAGGGGGACGGCGCGGGGAAGGAAATCGCGCCCTCGACCACACCGACCGCCAtccaccagcagcagcaacagcagcaacaacaacaacatcatcatcatcatcatcagcaggtGACGACGGGCAGATCGTCGAGACGGAAACCGGCGGCGCCGCAATGGGTCAATCCGGAGTGGCAGGACGAGAAGGAGACGGGcaaaccgacgacgacgaccgcgGCGGCGGCTGCGGCGGCATCGGCGGCGGACGAAGTGATAATTAACGGGGTCTGCGTGATGCAGACGGAGGATTACGGGCGACGCGGCGCCGAGGAGACGGTGCGCGTCGAACCGACGCCGGTCCTCGATCGGTACGAGGACGATCGCAGCGACGACGTGGCCTCGTCGTCGGCGAGCGAGACGGAGCAGCCGCAGAAGGAGACCGAActgaatcatcatcatctgcagcagcagcagttgAACgcggaggacgacgacgaggaggagacGGAGAAAGCGGCCGTTGTTAAGCAGGAGGCCGAGGACGAGCGGTGGGAGTATTAA
Protein Sequence
MITDRNGIDESIAQLLEEVQRLQVTITKLQESSLTQITRLEEQLEQKRQQIARLEVKLDVQKDYEEIKRELSIFKSRDLSLSSQECKLLGDAAADKAIESAPEQSPTNDNEGYDGAASKPIETPPPPSSQSIALPPRLPISSPQNALPPPFQNVETFGSLLGEEIVADWRRNIDPISLINNSRPIIIPSPSADGPLALSSSSTSTTTSTASTTTTTTTTASTTTLSTSSSSTTTASTTPLTVADSTVKSAASTPQPDLQQPHASPTTLLINGSSNRETPEDNNNLHVGNNNNNTLPLAQMCAVQTYLRNEDALKGSYRFDDQQPLPPHHHHHQQQQQQQQQSHHRSPSFRFADDLGMAPGSMLPRLGESLIPKSDPMEAKLQEMLRYNMDKYASQNLDTLHIARRVRELLSIHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDNAIMLLKSLIPKKDNFSSGKETGGIPSFGRPDADLTEERIAHILSEASQMQIKSASNNQTSSSMTMMMMEDSRSNDDSKSPHGGCSSPYSKESSQNRRLKKYENDDIPQEKVVRIYQEELAKLMGRRMDDLRNPREQQPFPGIFFPQLFSGGGPMDRTQEEIRIALDAYHREIVKLNQVQTNPSQMPNISLLALQQQALAQHSQAAAALNGGVQDLSLPKEKPSRSENGLEAKEKDEIDRNGSSAGSAFSLVRPKLEPGTAQSQQTGGGGGSTTSSPLGNAILPPAMTPTDDFGTSATASPLQRMASITNSLISQPPTQPHHASSQRPLKAVLPPITQQQFDLYNNLNTEDIVKKVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGTCTSAIVKPMPPTPKMISEAAGLINKMQQDTQSLLPPSLQLGPPPQLSSGQSSASSSISSSSSSVAAANQQQQQQQQTPSTMLLTPPGVPPHHAINIQNPGDVPTTTPKKPSPHGLVPHSPMGQQPTAMRSLHQHISPSVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLNDAHNVDRLQALKNERREANKRRRSSGPGAHDNSSDTSSNDTSEFYHSNSPGPGPPSAKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLANELGLSSRTITNWFHNHRMRLKQQVPHGGGVGGGGAIPTDVPPRDQSGNQAPFDPVQFRLLLNQRLLELSKERLGLTAVPLAYPPYLAANTTNLAALIGRGLLPSAEMDLAALNSAVKEQMSGLDLSMTTLKREPGDYDDEEEDVESNVGSEEDSNMSAGSLPIKGDGAGKEIAPSTTPTAIHQQQQQQQQQQHHHHHHQQVTTGRSSRRKPAAPQWVNPEWQDEKETGKPTTTTAAAAAAASAADEVIINGVCVMQTEDYGRRGAEETVRVEPTPVLDRYEDDRSDDVASSSASETEQPQKETELNHHHLQQQQLNAEDDDEEETEKAAVVKQEAEDERWEY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00807540;
90% Identity
iTF_00807540;
80% Identity
iTF_00807540;