Hpla008496.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Hololepta plana
Gene Symbol
JARID2
Assembly
GCA_963695495.1
Location
OY968837.1:4890742-4896690[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3e-22 4.3e-19 68.4 0.0 6 89 610 691 606 691 0.93

Sequence Information

Coding Sequence
ATGGTCCTTAATAGAAGCGAAACAATGAAGAGAAAACGTAATAAAGAAACTGATTTCTGTAATTTATTGGATGACAGTCCTAAAAGaACTAAAGTCCATGCTCAAAGAAAGTTTGCACAAGGATCCAATGTTAATAGCCCTGTGTTAACACCAGTAAAGGAGATTGAAAACGAAGCCGAAGAGGTGGTTCAAAAGAAACCAACCGcaaagaagacaaaaaaagtaaaagtcgAAAGTGATTCGGAACAATCGACAACATCCGATTCACCACCGCTGGAGAAGAACGCGAAGAATAAACGCTACACCAGAACAAAAACGGAACGGTTAATCGAAAACAGCTTCAGTGATTCGGATGAGGAGCCATTATCAAAATTCACTAGTCTGAAACAAGAGCAAAAATCGGCGCAGCAACCCAAACAGAACAGCGTTAAAGTGGAGGAAGTAAATGTCAAAGAAAAACAGACTATTAAGGAAGAATTACCATCGTACGGCAAACCAAAACGAGAATGCACCAAGAGACCGCAAAACTATCTAACTTTGTTCTCGTCatcggacgacgacgataagtTTTTCCACGGTTTCGTTAAAAGCGAAGCGATGAAACATACAAAAATCcaaaaacaacaagaagtagaagaaaagaCGTTACATGTGCCGCCGTCCGCTGATTTGTTAAGTAAAGATATTGGCAGAAGGTACGGCAAAGAAAAGGTAAATATGTCGACGGAGCAAATAGAGAAATGGTTGAAGGAGAGCGCTTTGGCTGGCGTAGTGGGCATCAAGACCGAACCGGAGGAAATGTTGAAATTCGGCGAAAAGATACCGACGGAAACGTCATTAGAATTATCCGATACTATTGATACGGATAATTTAAAGTCGGCACTACTTGTTGGTAAAGAGGCCGAAATACAGAAGGAAGTCAAAACGCCAATTAACGTTTCGTCTAGCGAGAGCGAATTGAAAATCCCGAAACTGGAATCGAAACCGCCTtcgaacgagaagaagattatttttaagaaagaaaagaaagaaacgccCAACTTGAACGCGTTCAGTGCAAATAACGAAAGTAGCGTTTATGCATTTGAAGCCGATACCGAGGATTCCCTCAATACCACCCCGTTCAGACGTCCGTCTAGAAGACCTTCAAGTGCTACATCGAGATCTGAAGAAGATTTAACTAAAGCAGACGACAAAATGTCGACTAAATTTCGCTTACCCTCATTTATAAAAACGGAACAATGCAAGAaacaagaagtggaagaaacgAATACTCCGATTGCAGAAATCGTTGATAAGACAAAATGTAAAACTAAACAGCAAGGAACTGTGTGTATTGTTTCAATGTGTCCACCTGCTAACAGTACCGTACAAAAACCTAAATCATCAACAACAGAATCGAAAGCAAACATTAAAAACGCGAACAAAACGTTCGACACGACGGATGAAATTAAGTATAAGGTACCGAGTTCGCCGAGTGCGAGTTCTTCGTCGAGCGCTAAATTATATAAGAGACAATCGGGCAATAAAATCCGCACAAAACTGGATTTCTGTTTGCCCGTCAACGTCACCGAATTCCCAAATGCACAGACTCAAACGGCACAAATGGTCGAGGCGCCCGTCTTTCATCCGACCGACAAAGAGTTTCAAGATCCTTTGGAGTACATCGAGAAGATACGTTTGCAAGCAGAGAAATTCGGCATTTGTCGCATTGTGCCACCGGCCACATTTAAACCGGAGTGTAAAGTGTCCGACGACATGCGATTCACCTCTTACAATCAATACATCAACAAGATGCTGTATAGATGGGGACCGAATTTTAAAGAGTTAATGGCCATTAAGAAGTATTTAGAAACGCAGAATATATCATTAACACAACCTCCATGGATTGGTGGCATGGAAATCGATTTGCCAAGATTATATCAAACCGTACAAGTTTTGGGCGGTCTCAAAGAAGtaatagagaaaaagaaatggccCAAAGTGTCCGAATTGATGAAGATACCTAAATCGGCCCAAGACCGTGTGACAAAATTGGAtgatatttattgtaaatacTTACTACCGTATGACACACTATCACCAGacGAACGGGAAAAATTATTCGACGAAGTCGAGACGGAATGGGCCAAAAAGGAGTCGCGTTCGCTGCTGAGGGCGCAGCAGGCCGCAAATAAATTAGAcgaattaagtaataattcGGATTCGGAAAGCGACGACGAATCGGAGGAATGTATAACCAAAGGAAGGAACATGGCGTTAAATGCCTTCTATCGAATAGCGAGAAACACTATGAGTATGTGGTTTAAAACGACGGAACCTCCAGCGCAAGAGGTCGAACAAGAATTCTGGAAACACGTTTCAAATAGGCAACATCACATTTGTGTCCATTCCGGCTCGATCGACTCGGGTAATTGGGGTTACGGATTCGCGGTGTCGAAGAACAGCCCGTTTGCGAGACACGCGTGGAACCTTAAAGTGTTAACAAACAATAGCGGCTCCGTCTTAAGATCAATGGGACCTGTTATGGGCGTCACCGTTCCAACGTTACACGTAGGCATGGTTTTCAGTGCGTGTTGTTGGTACAGAGATCCGCATGGGTTACCGTGGATCGAATATCTTCATACGGGCGGTAGAAAAATATGGTACGGAATACCAGATTCGATGAGCGAGAAGTTccacaaaactttaataaaaatagCGCCCAGCTATTGCTTAAACAAATCCCTCTGGTTGCCATCGGACACTGCAATGGTACCGCCAAATCTGTTACTCGAAAATGGCGTGTCCTTGTGCAGGACCGTACAGGAACCAGGTCAATTTATCGTGATATTTCCGAAAGCGTTCACGTCTAGTATAAGCACTGGTTATGTCGTGTCGGAGAGCGTCTACTTCGCTCCGCATTACTGGCTGAACACGGCAGAGAACGCATTCgaagaattgaaaatcaattgtGAATCGTCCATGTTCTGTTTCGATCGTTTACTTTTAAGCATTATCAACGATTCGCGCTCGAACGTGGATGTTCTAAGACAAGTGACACCGATGATAAGTAGATTGTgcgagaaagaagtaaaagacaGGAAGACGTTGGAGGATTTGGGTGTGAAGGAATGCGATCGATTACCGTTCAACGACGGCAccaagagaaagaagaaaatcaaagAAGACGGCGAATATGAATGTGAGACTTGCAGCAGAAACTTGTATCTTTCACTGGTTGCTGTTGATGGTGTTAACTACTGCTTGGAGCATGCAATAGAAATGataaattcgcaaaagttTGATGCTAAAACGTGCAAACTTTTGTATACGcacgatttaaacgaaatcCATGCGTTGGAGGAGAAAGTGAAAGTGAGCATTGAAAATAAGGTACACAAGAAGCCCATGAGTAAATTTAGTGGTATGCCAACATTACTCAAGTga
Protein Sequence
MVLNRSETMKRKRNKETDFCNLLDDSPKRTKVHAQRKFAQGSNVNSPVLTPVKEIENEAEEVVQKKPTAKKTKKVKVESDSEQSTTSDSPPLEKNAKNKRYTRTKTERLIENSFSDSDEEPLSKFTSLKQEQKSAQQPKQNSVKVEEVNVKEKQTIKEELPSYGKPKRECTKRPQNYLTLFSSSDDDDKFFHGFVKSEAMKHTKIQKQQEVEEKTLHVPPSADLLSKDIGRRYGKEKVNMSTEQIEKWLKESALAGVVGIKTEPEEMLKFGEKIPTETSLELSDTIDTDNLKSALLVGKEAEIQKEVKTPINVSSSESELKIPKLESKPPSNEKKIIFKKEKKETPNLNAFSANNESSVYAFEADTEDSLNTTPFRRPSRRPSSATSRSEEDLTKADDKMSTKFRLPSFIKTEQCKKQEVEETNTPIAEIVDKTKCKTKQQGTVCIVSMCPPANSTVQKPKSSTTESKANIKNANKTFDTTDEIKYKVPSSPSASSSSSAKLYKRQSGNKIRTKLDFCLPVNVTEFPNAQTQTAQMVEAPVFHPTDKEFQDPLEYIEKIRLQAEKFGICRIVPPATFKPECKVSDDMRFTSYNQYINKMLYRWGPNFKELMAIKKYLETQNISLTQPPWIGGMEIDLPRLYQTVQVLGGLKEVIEKKKWPKVSELMKIPKSAQDRVTKLDDIYCKYLLPYDTLSPDEREKLFDEVETEWAKKESRSLLRAQQAANKLDELSNNSDSESDDESEECITKGRNMALNAFYRIARNTMSMWFKTTEPPAQEVEQEFWKHVSNRQHHICVHSGSIDSGNWGYGFAVSKNSPFARHAWNLKVLTNNSGSVLRSMGPVMGVTVPTLHVGMVFSACCWYRDPHGLPWIEYLHTGGRKIWYGIPDSMSEKFHKTLIKIAPSYCLNKSLWLPSDTAMVPPNLLLENGVSLCRTVQEPGQFIVIFPKAFTSSISTGYVVSESVYFAPHYWLNTAENAFEELKINCESSMFCFDRLLLSIINDSRSNVDVLRQVTPMISRLCEKEVKDRKTLEDLGVKECDRLPFNDGTKRKKKIKEDGEYECETCSRNLYLSLVAVDGVNYCLEHAIEMINSQKFDAKTCKLLYTHDLNEIHALEEKVKVSIENKVHKKPMSKFSGMPTLLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-