Basic Information

Insect: Hofmannophila pseudospretella
Gene Symbol: stc
Assembly: GCA_947369225.1
Location: OX376320.1:6680214-6693798[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2 2.4e+04 -4.3 1.6 15 19 500 504 499 504 0.81

2 14 0.05 5.9e+02 1.0 1.4 2 10 532 540 532 540 0.92

3 14 0.0062 73 3.9 16.1 4 18 548 562 546 563 0.92

4 14 0.99 1.2e+04 -3.1 1.1 6 11 589 594 589 595 0.82

5 14 4e-09 4.7e-05 23.7 13.2 1 18 599 616 599 617 0.98

6 14 5.2e-07 0.0062 16.9 14.2 1 18 658 675 658 676 0.98

7 14 1.7e-05 0.2 12.1 11.5 1 19 717 739 717 739 0.87

8 14 2 2.4e+04 -5.3 2.2 6 10 769 773 769 773 0.94

9 14 0.0034 40 4.8 7.4 1 11 779 789 779 790 0.95

10 14 0.084 9.9e+02 0.3 0.2 4 10 794 800 793 802 0.92

11 14 3.8e-06 0.045 14.2 14.0 3 19 808 824 806 824 0.92

12 14 0.017 2e+02 2.5 17.1 1 18 863 879 863 880 0.89

13 14 3.9e-08 0.00046 20.5 14.5 1 17 916 934 916 940 0.84

14 14 0.0028 33 5.0 10.9 1 14 946 958 946 970 0.77

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2	2.4e+04	-4.3	1.6	15	19	500	504	499	504	0.81
2	14	0.05	5.9e+02	1.0	1.4	2	10	532	540	532	540	0.92
3	14	0.0062	73	3.9	16.1	4	18	548	562	546	563	0.92
4	14	0.99	1.2e+04	-3.1	1.1	6	11	589	594	589	595	0.82
5	14	4e-09	4.7e-05	23.7	13.2	1	18	599	616	599	617	0.98
6	14	5.2e-07	0.0062	16.9	14.2	1	18	658	675	658	676	0.98
7	14	1.7e-05	0.2	12.1	11.5	1	19	717	739	717	739	0.87
8	14	2	2.4e+04	-5.3	2.2	6	10	769	773	769	773	0.94
9	14	0.0034	40	4.8	7.4	1	11	779	789	779	790	0.95
10	14	0.084	9.9e+02	0.3	0.2	4	10	794	800	793	802	0.92
11	14	3.8e-06	0.045	14.2	14.0	3	19	808	824	806	824	0.92
12	14	0.017	2e+02	2.5	17.1	1	18	863	879	863	880	0.89
13	14	3.9e-08	0.00046	20.5	14.5	1	17	916	934	916	940	0.84
14	14	0.0028	33	5.0	10.9	1	14	946	958	946	970	0.77

Sequence Information

Coding Sequence: ATGTCGCAGTGGAATAACTCATACGCTTATAACAATCAGTATCAAGGTGCTAACGCCTGGAATGGTGATGCGAACAGGCAGCAGTACATGAATCAAGGTTACTATCCTAACCCCAGTAGCCAATATGTAGGTTTCAATGAGTTCCTGTCACAAATACAGGGTAGCAATGTAGCTGCAACAAACGCCGTTAACTACGACAATACACAATACCAGAATTATCCGGTCAGCCAGCAATACAACTACCAAAACATGCCCTCTAGCTCCCAGAACATGCAAGGAGACTCTTACAGTTATCAATCAAATGCTCCTAATAGCTCCACTGAAGAAGTGTATCAAGCACAAAGTCAGTACAACACCATGTTACCAGAAGCCAATTCTATTACAAATGAAATAGTGTTTAAATCTAATCTAACACCAACTGCAACAGAGTTTGTACCAAAAAGTTCGAGTGCAAATTCTTCTAATATCCATCTGGTCCAGCCAGAGTCTTCCCCTGTGTACAATGGGTTCAATGAAACTAAAAGTAGTTACAGTAGTAGTAGTTCTTCTGACAAGAATTGGAGGGAAAGACCACAAAGTTCCCAACAAGATGATGGTTCTCGTTATAATGACACATATAGGCAAAATGAACCAAGTAAATATGACTCAAATAATCATAGCCAGAAGAACTATGAACCAAATAGTCACAACCGAGAATTCAGCACGAATGGTCGTAACCGTGATTACAACAGTCGTAAAAACGAACCTAATGGTAGTAATCACGAAAACAATAGCCATCACAATGAGTACAGCAGTCGTAACAATGAATCCAAAAGTCGCAACTATGAATCCGACCGTCGTAACTATGAAACAAACAGTCGTAATGATGAATCTAGCAGTCGTAACTACGAATCCACTAGTCGGAATCAGGAATCCAGTGATGATCATGAATTCAACAGTCGTAATCAAGAATCAAATGATCGTAACTATGAATCTGGTAATCGTAACTTTGAGTCTAACAATCGTTACAATGATAACAGGGGCCAATCAAAAGCTAAATCAAAAGTTAAAGACTCTGAACGAACATTTTATAATAGCTCTATAAATAAAAGCAGTCAGGATGTCAGACTTGGAAAAGGAGAGGGTTCTAATAGAAAAAATTGGATTGGAAGTCAGAGATTGAGAACTGTAGATCGAAATGTTGCTGAGGATGAGCAATATGCCAGTAATTACTTGCAATATAGAGAGGAGAAAGAAAGAAAGGCTAAAGCTGATGCTGTGTCCAGTCCACGGAGGAATAATAATAAACTTGCAGTAGATCAAAAGGGGAATAAAGAAATGACACAACGTGAGCGCTTGAGCGAACAACTAGATAAAGGCACATTAGAATGCCTGGTTTGTTGTGAGCGCGTCAAGCAGACTGACTCAGTGTGGTCATGCAGCAACTGTTACCATGTACTGCATCTGCGGTGCATTAGGAAATGGGCACTGAGCAGTATAGTTGAGTGCAAATGGCGTTGCCCGGCTTGCCAGAACACGAGCGAGGAAGTTCCAGCTGAGTACCGCTGCATGTGCGGCGCGATGCGGTCGCCGGACTACCACCGCGGTGCGGGCGGCGCGCACACTTGCGGCAAGGCGTGCAAACGACCGCGGAACTGCCCGCACCCCTGCCCACTAAACTGCCACCCTGGACCGTGCCCGCTGTGCCTCGCTACCATCTCCAAGTTATGCGGATGCGGTGCGGAGGCCCGCTCAGTGGTGTGCAGTAACAAATCGCCGCAGGTGTGCGGACGCGAATGCCACCGCACCTTGACCTGCGGCGTCCACACGTGCGCTAAGGAGTGTCACGAGGGACCGTGCGACCCCTGCGCCGAGACTGTCACGCAAGTGTGCTACTGCATGGCGGCGGTATCGCGCTCGGTGGTATGCACGGCGGAGACGGGCGCAAGCGCGACGTGGTCGTGCGGGCAGATGTGCTCGCATGTGCTGCCGTGCGGCGCGCACGCGTGCCAGCGGACGTGCCATGCGCCGCCGTGCCCGCCCTGTGACCTGCTGCCCGACACCGTCGTCACGTGCCCCTGTGGCAGGACCCAGCTAGAGAAGGGCAAACGCGAGAAGTGCACGGACCCCATCCCTCTGTGCGGGAACATCTGCGCCAAGCCCCTGTCCTGCGGCCCGGCCGGAGACAAACACTTCTGCAAACTCAACTGCCATGAAGGCGATTGCCCCGAGTGCCCCGACAAGACGTTGCTGCAATGCCGCTGCGGGCACTCCAGCCGTGAGGTGCCCTGCGCCGAATTGCCCGAGATGCTCAACAACGTGCTGTGCCAGAAGAAGTGTAATAAGAAACTGTCCTGCGGGCGACACCGCTGCCGCACTGTTTGCTGCGCGGCGCAGTCGCACCGCTGCGCCGTTATCTGCGGCCGCACGCTCTCGTGCCAGCTGCACCGCTGCGAGGAGTTCTGCCACACCGGGCACTGCGCGCCCTGCCCGCGCGTCAGTTTCGAGGAGCTGGCATGCGAGTGCGGCGCAGAGGTGTTGCTGCCGCCCGTCCGCTGCGGCGCCAAGCCGCCCGCCTGTAGCGCACCGTGCCGCCGCGCCCGGCCGTGCGGCCACCAGCCGCACCACTCGTGCCACTCGGGCGACTGTCCGCCCTGCGTCGTGCTCACCACCAAGATGTGCCACGGTCGCCACGAGGAGCGCAAAACGATCCCGTGTTCCCAAGACGAGTTCTCATGCGGCCTGCCGTGCGGGAAGCCGCTGCCGTGCGGCCAACATACCTGCATAAAGACCTGCCACAAGGGGCCCTGCGATACTGGCAAATGCACGCAGCCGTGCAACGAGAAGCGGCCGAGTTGCGGCCACCCGTGCGCGGCGCCGTGCCACGCGGGCGCCGGCGGCAGCGCGTGCCCGAGCTCGGCCCCGTGCCGCCGCCTCGTGCGCGCCACCTGCTCCTGTGGCCGCCGGCACGCCGACCGACCGTGCTGCGACAACGCGCGCGACCTTGCCAGAATAATGAGCACGCTGGCTGCCACAAAGATGCAGGAAGGTGGTTCTGTCGACTTGTCTGACGTGCAACGTCCTGGGGCCATGCTCAAAACGCTGGAGTGCGACGACGAATGCCGCGTAGAGGCGCGCACGCGACAGTTAGCGCTGGCGCTACAAATCCGCAACCCGGACGTGTCGGCGAAACTCGCACCGCGCTACAGCGACCACGTGCGCAACACCGCCGCCAAGGAACCCGCCTTCGCGCAACAGATCCACGACCGGCTCACAGAGCTCGTGCAGCTCGCTAAGAAGTCGAAACAAAAGACTCGCGCCCACTCCTTCCCCTCCATGAACTGGCAGAAGCGACAGTTCATCCACGAACTGTGCGAACACTTCGGCTGCGAGAGCGTCGCCTACGACGCTGAGCCCAACAGAAATGTCGTAGCCACCGCCGACAAGGAGAAGTCGTGGCTGCCAGCGATGAGCGTGCTAGAAGTGCTAGCCCGGGAGGCTGGCAAGCGGCGCGTACCGGGACCCATACTGCGGGCTGCTGGTAACCAAGGCTCCGGGCCTTCAGTACTCTCCGCCCCGGCTTCTAACTCTGCCAAATCGTCAGGCGGCTGGGCGACTCTAACGTCGACAAACGCTTGGGCGGCGCGCAGTCAGGTCCGGCAGGCGAACCAACCCGCTCCCGCTTCAGCTACCGCTCCGCCCGTAGAAAAGATAGACTACTTCGACAACCCGCCCGACAACTAA
Protein Sequence: MSQWNNSYAYNNQYQGANAWNGDANRQQYMNQGYYPNPSSQYVGFNEFLSQIQGSNVAATNAVNYDNTQYQNYPVSQQYNYQNMPSSSQNMQGDSYSYQSNAPNSSTEEVYQAQSQYNTMLPEANSITNEIVFKSNLTPTATEFVPKSSSANSSNIHLVQPESSPVYNGFNETKSSYSSSSSSDKNWRERPQSSQQDDGSRYNDTYRQNEPSKYDSNNHSQKNYEPNSHNREFSTNGRNRDYNSRKNEPNGSNHENNSHHNEYSSRNNESKSRNYESDRRNYETNSRNDESSSRNYESTSRNQESSDDHEFNSRNQESNDRNYESGNRNFESNNRYNDNRGQSKAKSKVKDSERTFYNSSINKSSQDVRLGKGEGSNRKNWIGSQRLRTVDRNVAEDEQYASNYLQYREEKERKAKADAVSSPRRNNNKLAVDQKGNKEMTQRERLSEQLDKGTLECLVCCERVKQTDSVWSCSNCYHVLHLRCIRKWALSSIVECKWRCPACQNTSEEVPAEYRCMCGAMRSPDYHRGAGGAHTCGKACKRPRNCPHPCPLNCHPGPCPLCLATISKLCGCGAEARSVVCSNKSPQVCGRECHRTLTCGVHTCAKECHEGPCDPCAETVTQVCYCMAAVSRSVVCTAETGASATWSCGQMCSHVLPCGAHACQRTCHAPPCPPCDLLPDTVVTCPCGRTQLEKGKREKCTDPIPLCGNICAKPLSCGPAGDKHFCKLNCHEGDCPECPDKTLLQCRCGHSSREVPCAELPEMLNNVLCQKKCNKKLSCGRHRCRTVCCAAQSHRCAVICGRTLSCQLHRCEEFCHTGHCAPCPRVSFEELACECGAEVLLPPVRCGAKPPACSAPCRRARPCGHQPHHSCHSGDCPPCVVLTTKMCHGRHEERKTIPCSQDEFSCGLPCGKPLPCGQHTCIKTCHKGPCDTGKCTQPCNEKRPSCGHPCAAPCHAGAGGSACPSSAPCRRLVRATCSCGRRHADRPCCDNARDLARIMSTLAATKMQEGGSVDLSDVQRPGAMLKTLECDDECRVEARTRQLALALQIRNPDVSAKLAPRYSDHVRNTAAKEPAFAQQIHDRLTELVQLAKKSKQKTRAHSFPSMNWQKRQFIHELCEHFGCESVAYDAEPNRNVVATADKEKSWLPAMSVLEVLAREAGKRRVPGPILRAAGNQGSGPSVLSAPASNSAKSSGGWATLTSTNAWAARSQVRQANQPAPASATAPPVEKIDYFDNPPDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -