Hpse006180.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Hofmannophila pseudospretella
Gene Symbol
nfxl1
Assembly
GCA_947369225.1
Location
OX376332.1:10726799-10729270[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 19 2 2.4e+04 -7.8 5.6 15 19 134 138 133 138 0.81
2 19 0.13 1.5e+03 -0.3 0.4 4 10 169 175 168 175 0.95
3 19 1.3e-06 0.015 15.7 15.3 4 19 187 202 185 202 0.94
4 19 4.5e-07 0.0053 17.1 15.4 3 18 239 254 227 255 0.86
5 19 1.2e-09 1.4e-05 25.4 11.3 1 19 290 308 290 308 0.98
6 19 2.7e-06 0.032 14.6 20.1 3 19 345 361 337 361 0.86
7 19 1 1.2e+04 -3.1 1.8 5 10 384 389 384 389 0.93
8 19 2.9e-06 0.035 14.5 18.2 1 18 395 412 395 413 0.97
9 19 3.1e-08 0.00037 20.8 15.8 1 19 422 440 422 440 0.98
10 19 0.00025 3 8.3 4.9 9 19 488 498 486 498 0.87
11 19 0.017 2e+02 2.5 8.4 3 12 509 518 508 518 0.90
12 19 0.35 4.1e+03 -1.7 3.6 14 18 547 551 547 552 0.87
13 19 0.12 1.5e+03 -0.2 0.5 7 12 567 572 567 579 0.83
14 19 9.1e-06 0.11 13.0 5.3 1 11 588 598 588 599 0.97
15 19 0.46 5.5e+03 -2.1 1.3 14 18 612 616 612 617 0.85
16 19 0.00028 3.3 8.2 13.7 4 18 630 645 628 646 0.87
17 19 2 2.4e+04 -6.5 3.4 9 13 652 656 652 656 0.71
18 19 0.00088 10 6.6 15.8 1 18 687 705 687 706 0.89
19 19 2 2.4e+04 -4.4 0.8 6 10 736 740 736 741 0.85

Sequence Information

Coding Sequence
ATGGCGCGGAGATATCGAGATGCCGCCGCAAAACTGCATCAGAACGTGCAACGGCACTTGAAGGAGATGAAGGAGCTTTCCTCGTCAGACGACGAGGATCCGTTCGAGTCTTCCGTCCTAGAAGGAGTGTTCCAGAGCTACTGGAGCGGAGGAGGCGACGCCCACCTGCTGAATCGGACCAAAAACCTTCTGGAAGAAGCGATAAGCGGCCGACCCGTCACCTGCCTGATTTGTATAGGATCGATCAAAAGGGCCGATGCTATTTGGACATGCAACCACTGCTTCTCTTATTTCCATTTATCTTGTATCCAAAAATGGTCCAATGATAGCATTAGTCTTAGAACTGAAGAGAACCACGGCCCTATTGCCGTCGTGGTGCCCAAGAAAATCGAATGGTGCTGTCCGAAGTGTCGGCATTCGTATACTAAAGAGCAAATACCGCGGAGATACAAATGTTTTTGCGGCAAAATTGACGACCCACCCGTCCACCCGTGGTTGGTGCCACATTCTTGTGGAGAAATATGTGAAAAAAGACTTTCCACAGGCAATAACTGTGTGCATCAATGTTTGCTGCTCTGCCACCCTGGGCCGTGCCCGCCGTGCCCCCAGACTGTCGATGGAGTGTGTTACTGTCAAAAGGAGCATAAAAAAGTAAGATGTAGCTCGGCCAAGTGGTCATGTGGAAAAAAATGTGGTGGACTACTTTTGTGCAAGTCACATAGATGTGAAAATCTTTGTCATGAAGGAGACTGCTCTCCTTGCAACTACACAAGCCTGCAACCATGTCTATGTTGTACTGAAAAAGTCAAACGTCCATGTGCTGACCCCAAATGGCGATGCTTAAAGCCATGCAACAAACCTTTCTCCTGTGGATATCACAAGTGCGAAAGAATATGCCACTCAGGAGATTGTGGGTTGTGTCCCAACTCAGGCAAAAGGTCTTGTCCATGTGGTGCAAATCAGAGATATGTACAATGTCCAGATGTTATGGAAACATGCCTCGGCACTTGTGGTAAGAAACATGAAGATTGTGAACACAACTGTCCAGAGAAATGTCATAAAGGCCCCTGTCCACCATGCCAGGTGTTAATACAGAAGCAATGTCTGTGCTCTGCTCATACAAGGTCTCTACCATGCAGCAAAGAGTTCAAATGTGAATCTAAATGCAGAGGAACAAGACCATGTGGGAAACATCCTTGTGCTCGAAAATGTTGCAATGGTAACTGTCCTCCCTGTGAGAAGATCTGTGATAAACCTCTCCAGTGCAGCCGACACAAATGTACCAGTGTCTGCCATCACGGTCCTTGCTACCCGTGTCCCAGGGAATCTAAAGTAACCTGCCGATGCAAAGAAACTTATGTTGTTGTCCCATGTGGTAGAGAAAAGCACACTAAACCACCTAAATGTAGTCTCCCATGTAAGATTAAATATAAATGTGGACATGTGGAAGAAAACCAACATTCCTGTCATTTTGGTGATTGTCCATCATGCAGAGCCATTTGTGATAAGCTGTATCCAAACTGTGAACATAAATGTAAGGCCACATGCCATGAATACGTAGCAGTTGTCTTCAAACAGGTAGAAAAGCCAGCGACTCCTTGGGAAGTTCAACCTCCGAAAACTAAAATAATGACATTAGACTGTCCTCCTTGTGATACACCCATCCCTGTCATTTGTTTCGGAGAACATGAGACAGAAGAGCAACCTTGTCATTCAGCTAAACGTCGACCGTGCGGTCGAGAATGCGGCTGTCCATTGCCCTGTGGGAATCACAAATGCACACTACTCTGTCACCTCTACAGCTCAGATCCTGATTACCCGAGTGTGCCCTATAATTGTAGGCCATGTAACAGAGAATGCTTAGTGCCCCGGCCAGAGAAATGCGCTCACAAATGCGCGAAGGGCGCCTGTCACCCCGGTGCGTGTCCACCTTGCGATATTCTTGAACGAATCCCTTGTCACTGTGGCATCACCGAACTATACTTACGTTGTCGGGAGTTATCAACCGCAACTGAAGAAATGTTGTCTTGCAAACAACAATGCCCAAAGAACTTAGACTGTGGACACCGTTGCAGAAATAACTGCCATCCTGGTCACTGTGGAAACCAAGTCTGTACGAAGAAGACCAAAATCTACTGCCCATGTGGCAACTTGAAGAAGGATGCTCCATGCAATGTGGTGAAGAAAGGTGATGCCAAAGTGGATTGTGATGAAACCTGCAAAGCGAAAAAGATGGCAACACAGTTAGAGAAAGAAAAGGAGGAACAGAGACAGAAACAGCTTGAAGAAGAAAGGAATCGTAAGGAGTTGGAAGAGTATGAATGGAAATTGAGTGGGAAAAAGAGGAAGTATAAGGAAAAGAAGGTTGTAGTTAATAGGGATGATAGGAATTTGTTGCAGAAATATTGGATCCCAGTTTTATCTTTTTCCGTTGTTCTATTTGCAGCACTGTATTACGTATTTTCTATGTAA
Protein Sequence
MARRYRDAAAKLHQNVQRHLKEMKELSSSDDEDPFESSVLEGVFQSYWSGGGDAHLLNRTKNLLEEAISGRPVTCLICIGSIKRADAIWTCNHCFSYFHLSCIQKWSNDSISLRTEENHGPIAVVVPKKIEWCCPKCRHSYTKEQIPRRYKCFCGKIDDPPVHPWLVPHSCGEICEKRLSTGNNCVHQCLLLCHPGPCPPCPQTVDGVCYCQKEHKKVRCSSAKWSCGKKCGGLLLCKSHRCENLCHEGDCSPCNYTSLQPCLCCTEKVKRPCADPKWRCLKPCNKPFSCGYHKCERICHSGDCGLCPNSGKRSCPCGANQRYVQCPDVMETCLGTCGKKHEDCEHNCPEKCHKGPCPPCQVLIQKQCLCSAHTRSLPCSKEFKCESKCRGTRPCGKHPCARKCCNGNCPPCEKICDKPLQCSRHKCTSVCHHGPCYPCPRESKVTCRCKETYVVVPCGREKHTKPPKCSLPCKIKYKCGHVEENQHSCHFGDCPSCRAICDKLYPNCEHKCKATCHEYVAVVFKQVEKPATPWEVQPPKTKIMTLDCPPCDTPIPVICFGEHETEEQPCHSAKRRPCGRECGCPLPCGNHKCTLLCHLYSSDPDYPSVPYNCRPCNRECLVPRPEKCAHKCAKGACHPGACPPCDILERIPCHCGITELYLRCRELSTATEEMLSCKQQCPKNLDCGHRCRNNCHPGHCGNQVCTKKTKIYCPCGNLKKDAPCNVVKKGDAKVDCDETCKAKKMATQLEKEKEEQRQKQLEEERNRKELEEYEWKLSGKKRKYKEKKVVVNRDDRNLLQKYWIPVLSFSVVLFAALYYVFSM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01091368;
90% Identity
-
80% Identity
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