Hpse015698.1
Basic Information
- Gene Symbol
- GATA4
- Assembly
- GCA_947369225.1
- Location
- OX376320.1:3619310-3631544[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.3e-18 2.5e-14 53.0 3.0 1 35 384 417 384 418 0.98
Sequence Information
- Coding Sequence
- ATGACCAAACATAAATATGCAGAGGTCGGATCCCCGGACTCCACGGAAGAAATGAAGAATTTGGAGAGTCGGCAGGCGGCGGTTACGCTGCTACAGATAAAGAACTACGATCCGTCAAAATACGTGGTCAAACAGGAGGAGGATCCTCACATAGTATTCAAGAGCGTGCCGAGTTTACCGCCCTCGGAGAGAGCTAAAGAAGTGATGCATTGCAACGCCGTCATCGACATAATTAGCAAAGCGGTGGCGGTCGCGCAAAGGGAAAACGAAGAATCTCAGAAATTCGCACCCAACTACGCCAGCGTCATCGACAGGACGCTCGCACCGAACGTCAGCGAGGTGGTCTCATACACACACGAGTATCCCGAAGAAAAGTATAATTACACGACACAAAACGCAGCCAGCCCCGAAAACGAAGACCATGACAAAGAGATGGATCTCTCACTCTACAGTAGTGTCAAAACCGAGCTAATGGAACAGAGCGAGCAACCAGATCCGACGACATTCTTCCACAGAACATTGGCGCATAAAAAGAACTTCGCGGACGAGTACAAGCAACACGTGTTCGGACAGGCGGTCAGTAAAACGAAAACGTCTAAAGACAACTCCTCGGTGTACGAGGATTGCAGTCAGAGCAGTAGTGGGTCAGATCCAGAGAGGCTGCAGATGGATATATCTCAGATGTCGCAGGACGACCCTGAGGAAACGCAGTCAGCGCGATCGACCCAGTCGTCGCCACAGCCCACAGACAATGAAAACGACAAGGACTCTCTATGGCAGGCTCTTCATCGGCAAAATGGTCGAGGTGGTGAGGCGACGCAGCTATTAAGACGGCTGATCAACAGCAAGCATCTTGGCATGACAGTATCGCCGCTGAGAGCGTCCACGTCGCCGCTGACAGCGACGCTACAGCAGCCGCCCAACGGCTCCGTGTCACCGAACGGCGAATGGCAGAGCTCTGGACGCGGGTCAAGCGGCGCGGGCACGGCGCGGAGGAAACAGAGCTTCCCGGCGCGCGCGCAGCCGCCCCACGAGACGCCGGCCACCACGCCGCCCTGGGTGCAGCCCGCCGCCGACAACCAAGAAGCAACGGACGCGTCAACAGCGGGAGCCGCGGGCGGGCGCGCGGGCCCTCGCGTGGAGCTGTCGTGCAGCAACTGCGGCACCCACACCACCACGATCTGGCGGCGCGACGCGCGCGGCGAGATGGTGTGCAACGCGTGCGGCCTCTACTACAAGCTGCACGGCGTGCCGCGGCCCACCGCCATGCGCCGGGACACCATCCACACGCGCCGCCGCCGCCCGCGGCACGACCCCAAGCACGCGCGGAACAAGTCCAGACGCAGCGGCGGTGCGTGCGCCGAGCCCGCGGAGCCGGCAGCTGGCAGCAACTGTGCCAGTAACGACGCGCCCGAGGAGGCAGTGTTGGCAGCACTGCGGCGGCAGTTACAGCCCCACTTGTTGGCGGCACTGCACGCGCATAGCACGCATCGCTCACAGGCCCCGGAATACGACGAAGCCCCCCTGAACCTGGTGGCTAACCACGTGGCCGCCGAGGAGTCGCACTGA
- Protein Sequence
- MTKHKYAEVGSPDSTEEMKNLESRQAAVTLLQIKNYDPSKYVVKQEEDPHIVFKSVPSLPPSERAKEVMHCNAVIDIISKAVAVAQRENEESQKFAPNYASVIDRTLAPNVSEVVSYTHEYPEEKYNYTTQNAASPENEDHDKEMDLSLYSSVKTELMEQSEQPDPTTFFHRTLAHKKNFADEYKQHVFGQAVSKTKTSKDNSSVYEDCSQSSSGSDPERLQMDISQMSQDDPEETQSARSTQSSPQPTDNENDKDSLWQALHRQNGRGGEATQLLRRLINSKHLGMTVSPLRASTSPLTATLQQPPNGSVSPNGEWQSSGRGSSGAGTARRKQSFPARAQPPHETPATTPPWVQPAADNQEATDASTAGAAGGRAGPRVELSCSNCGTHTTTIWRRDARGEMVCNACGLYYKLHGVPRPTAMRRDTIHTRRRRPRHDPKHARNKSRRSGGACAEPAEPAAGSNCASNDAPEEAVLAALRRQLQPHLLAALHAHSTHRSQAPEYDEAPLNLVANHVAAEESH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00027428;
- 90% Identity
- -
- 80% Identity
- -