Basic Information

Insect: Hofmannophila pseudospretella
Gene Symbol: Znf296
Assembly: GCA_947369225.1
Location: OX376311.1:19545812-19554134[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0023 0.15 13.0 0.2 2 20 188 206 187 210 0.91

2 11 0.064 4.1 8.4 2.9 1 23 249 271 249 271 0.97

3 11 0.013 0.8 10.7 0.3 2 20 367 385 366 387 0.92

4 11 0.00038 0.025 15.4 2.4 1 23 395 417 395 418 0.94

5 11 1.1e-05 0.0007 20.3 3.1 1 23 446 468 446 468 0.99

6 11 3.8e-07 2.4e-05 24.9 2.8 1 23 475 497 475 497 0.98

7 11 4.1e-07 2.6e-05 24.8 1.7 3 23 510 530 508 530 0.96

8 11 3e-05 0.0019 18.9 3.2 1 23 536 558 536 558 0.99

9 11 2.6e-06 0.00017 22.2 2.6 2 23 565 586 564 586 0.96

10 11 1.5e-07 9.7e-06 26.1 1.5 1 23 592 614 592 614 0.99

11 11 0.0014 0.087 13.7 0.1 1 23 620 642 620 642 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0023	0.15	13.0	0.2	2	20	188	206	187	210	0.91
2	11	0.064	4.1	8.4	2.9	1	23	249	271	249	271	0.97
3	11	0.013	0.8	10.7	0.3	2	20	367	385	366	387	0.92
4	11	0.00038	0.025	15.4	2.4	1	23	395	417	395	418	0.94
5	11	1.1e-05	0.0007	20.3	3.1	1	23	446	468	446	468	0.99
6	11	3.8e-07	2.4e-05	24.9	2.8	1	23	475	497	475	497	0.98
7	11	4.1e-07	2.6e-05	24.8	1.7	3	23	510	530	508	530	0.96
8	11	3e-05	0.0019	18.9	3.2	1	23	536	558	536	558	0.99
9	11	2.6e-06	0.00017	22.2	2.6	2	23	565	586	564	586	0.96
10	11	1.5e-07	9.7e-06	26.1	1.5	1	23	592	614	592	614	0.99
11	11	0.0014	0.087	13.7	0.1	1	23	620	642	620	642	0.98

Sequence Information

Coding Sequence: ATGGCATCGTCTTTGAAAAAAACGGAAATAAAGATCGAAGAAGTGTGTCGAACATGTTTGTCAAAGGAAAAAGAATTGCATTCGGTTTTTGACTTGTATCTAGGAACAATTACCTTAGACTATATTGTAGGTGCAATTACGGGTGTAAAGATTGAGCGAGGCGATGGATTGCCATCTACAATATGTCGCGACTGTAAAGAAAAAGCTGAAAAAGCATATGAGTTCAAACAAAAATCACAAGAAGCTGACATTAAACTACGAGGTCGGTTTAAGAAGGAAAAGTTAGAGTATTCCATTGTTGAAGTTCCTTTGTACCAGCCCATGGGTGTTAAAACCGAACAATTTAACACTGATGATCATGACGACTTCTTGGATTCTGACTTTATTTCAAATGGGCCTGATGAAAGTAACGATACAGAAACAGTGAAAAAAGAGAGACAAGATGCTGAGTCGTCACTGCAATCCAAAAGCCGTTTCTTAGCTTATGACTCTACTGATAAATCAATGGAAATTAAAAAGAAAAAGTGTATAAAGGTTGAAATTGAAGATTCTGTTAGCACTTATTGCCCATTGTGTGGTACATCCTATGATGGCACAGAAAATTTAACAAATCACATGTGGACTTATCATGCTGAGCTAATGGGCCCAAAGAAGAAAGGGAAACCAAAAAAATTAATGACCAGTTCAATATTAACGAAACTATCTGAAAATGGATTCCATTTCAAATCAGTTCCGGTTAAAAAGTTTGATTGTGTTTTTTGTAAGCTGCAATGTAAAACCAAAGAAGACTTAGGAAGTCATATGTCGAAGCACAAGGACACGAAAGTTTTCTGCTGCATCTTATGTAAAAAAATGTTTTTAAAGAAGAAGAACTTCGACCAGCATAGCTGCATGACTAAGGATGACAAGAGCGATACACAGCTGAGGAATAAAGACCTGAACTGTGTTACTGAAATTTTGTTGCGTGAATTGTTGGATCCAAATTGTGATATGGAGAATATGAACGTCCTACAAGTGTGTAATGTATGCAGCGGTGTGTTCCTTTCTGAGGAGGAACTAGTTAGTCACAACGACGCCGAACATCCAGAACGTTCACTGCGATGCAATATTTGCACAAAAGATTTTTCTTCTGTAAAGTCAGCAACGCGTCACCGGAGCGTGTGCAAGCAGGTAGACAGGAAGCACATCTGCAACACTTGCGGACTCAAGTTTGCCTATGAGATATCACTCAACAAGCACATACTGCGGCACCATGAGGGGCAGAGTGTCTCTGTGACATTCATGGACACTAAGCCCCCAAAGGCGGTCGAGCCGGAGCAACGGGACGACGCCCAATATCAATGTGATACGTGTAATAGGTGTTTCCCTAAGAAAGAGTCGCTTGCTAAACATGCTAAAACGCACATGCCCATTGAAAAGTATTTCGAGTGTGACATCTGTAAGAAGAAATTCTCTAGAAAAGATAATTTGAGATCGCACAAAAAGATTCACGAACCGAATCGTGAAAAGCCGCCAAACAATTGTCTATGTCTGTATTGTGGTCGCGGATTCTCAAACTCCTCGAacctgatcgtgcacatgcgtcgtcacactggcgaaaaaccctataagtgtgatttttgtggaaaagGGTTCCCGAGGTCCTCAGATCTCCAGTGCCACAGGAGATCACATACTGGTGAAAAACCATGCATCTGTCGTGTCTGCGGAAAAGGATTTTcgcgcagcaacaagctgtcgcgccacatgcgcgtacacactggccagaagccgtataagtgcacgtactgcgagaaggctttctcgcagagcaacgaccttacgctgcacatccgccgccacacaggggacaagccctacatctgcgaggtctgcggcgaccgcttcattcagGGGACAGCATTGCAAAATCATAGGCGCGTTCATGGCCACTTCCCGCCTACTTCAACGGACACACAAACACAAGGGCATGGAATGCCTTATACTGTTCAAAATATGACTCAAACTCATTGA
Protein Sequence: MASSLKKTEIKIEEVCRTCLSKEKELHSVFDLYLGTITLDYIVGAITGVKIERGDGLPSTICRDCKEKAEKAYEFKQKSQEADIKLRGRFKKEKLEYSIVEVPLYQPMGVKTEQFNTDDHDDFLDSDFISNGPDESNDTETVKKERQDAESSLQSKSRFLAYDSTDKSMEIKKKKCIKVEIEDSVSTYCPLCGTSYDGTENLTNHMWTYHAELMGPKKKGKPKKLMTSSILTKLSENGFHFKSVPVKKFDCVFCKLQCKTKEDLGSHMSKHKDTKVFCCILCKKMFLKKKNFDQHSCMTKDDKSDTQLRNKDLNCVTEILLRELLDPNCDMENMNVLQVCNVCSGVFLSEEELVSHNDAEHPERSLRCNICTKDFSSVKSATRHRSVCKQVDRKHICNTCGLKFAYEISLNKHILRHHEGQSVSVTFMDTKPPKAVEPEQRDDAQYQCDTCNRCFPKKESLAKHAKTHMPIEKYFECDICKKKFSRKDNLRSHKKIHEPNREKPPNNCLCLYCGRGFSNSSNLIVHMRRHTGEKPYKCDFCGKGFPRSSDLQCHRRSHTGEKPCICRVCGKGFSRSNKLSRHMRVHTGQKPYKCTYCEKAFSQSNDLTLHIRRHTGDKPYICEVCGDRFIQGTALQNHRRVHGHFPPTSTDTQTQGHGMPYTVQNMTQTH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01091014;
90% Identity: -
80% Identity: -