Hpse001848.2
Basic Information
- Gene Symbol
- Znf541
- Assembly
- GCA_947369225.1
- Location
- OX376330.1:8794238-8818642[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.7e-09 4.1e-06 27.2 0.1 2 46 834 878 833 878 0.96
Sequence Information
- Coding Sequence
- ATGTACCACCAACATAAACATGAGACCTCAATCTCGCCTGATGTATGCAACAAGATCTTTGGCAACGCGTCGGCACTGGCTAAGCACAAACTGACACACAGCGATGAGCGGAAATATGTGTGCATCACATGCGCAAAGGCATTCAAGAGACAAGATCATTTAAACGGGCATATGCTGACACATCGAAACAAGAAACCTTACGAGTGCAAAGCGGACGGATGTGGGAAATCGTACTGCGATGCGCGCTCGCTGCGGCGACACACGGAGAACCACCATCAGCCAACATCTGATACCAGTAAAAACGGCAGCGGGAGCACAAGCGCAAGCGGTAGCGAGCGTGAGCCGAACTCTCATCGCGTGGCCTCCCCCATCTCTCCGGCCCGTAGTAACCCCCCACATTCTGATTCTAGCAACTCTGGGTCTGAGAAGTCGAGTGGCACAAATGCGAGTGGCAGCGGGAGCGGGAGCGGAAACGGAGGCGGAGACAGTAGTCCGCCGCATACGCCTCCCACGCCTGTCACCCCGCCCGCGCGCCCTAAATCCAACAAAGCGAGCAGTAGCAAGGCCAAAACTTGTGCAACGGCACAGCAGGGGACTCAAAAATGTGGAAGTGGCGGCAGTGGCAGCGGGCCGTCGAACGGAGCTACGGGCGGAGTTAGCACAGCAGCGAGTCGCCCGAGCGACGTCAAACCAGTCGAATGCAACCTTTGCCATCGCAAATTTAAGAACATACCGGCCCTTAATGGCCACATGCGACTACATGGCGGATATTTCAAAAAGGATTCAGATAGCAAAAAGCTGGATAAGAAGGAATCTTCTGGACCTCCACTGCAAACTGCGTCAGTGTCTGTTCGAGCACTCATTGAAGAGAAGATCATCAGCCGGCGAGGGGCGACTGTCACCTCCACACCATCCATGGGCACGAGTACGGACACTGTGGCTTCCCGCGTGGGCTTCGTTGCTCCCGCTCCACCGCCACTATCAACAATTCGCACTTCTGTGGCCTCACCCGCTTCACCTGCTGCTACGTCTGCTCAGTTCGTATCACCGCGAGCACCGCCCATTGTCACAATCGCTACCAACATCACCGCTGCTCACAGGGACTCCACCCTTATCGAACTCTTGAAGAAGGGCAATTCAAAGGTGGTGAAACGATCAGCATCAGACCCGGGGCAGTCGTCACCTCAACAAGAATTCACTTTTCGCCCGGATCTCTTCGGGGTATCGTTCAACTCGGATGACGGGTACTTCTCACCAGCTCTCAATGAGGATACCTTCCAATTTACGACAACATCTGAGCAATTGGAAGAGCTAGCCTCTCTAGAAGATTACGCCACAGTAGCAGCATCTATAAGAGAACGTTCGCCAGTTACCTTCCCGTCCAGTAGACGACTTGCCGCAGTTCTGAACTCACCACTACCAGAATCTTTAGCTGATTTTGGTGCCTGTCATGGTGGATCGCCTGTACCATCACCGGGTATCGGCTATGCTGCGAATTCTCCAGGCCTTTCATATTCCACTGGAGATTCTCCAGGGCTGGCATACACAGCTGCGTCACCTGGAGGAAGTTATTCTACTCAGCCTGAACCATCACCAGGGTTAGCTTACCCGACTCCGCCTGCCTCTCATGATGCTCAGTCGCCAGCTCACACTGTACCACGTGCATCATCACCATTATCCGCTGCTTTCTTTACAGCTACGATGTCAAGTCAGGAAGAGGTGGAAGAAGCCTTAGAAGAAGTGTTGCCCGAAGAATGCAGGTCACTAGATGCCTACGCCTTAGAACCGTCACCGACGCCACGACGAATTATGCTCAACTCCGAAGATCCGCTTCTATCGAGTAGTCCACGAGACTTCACTCATCAACGGCCTATGAGACGACATCACCGCATGATCGCTTCTACTTCCGTCACAGCTATGCATCAATGGCAGCATGATACCTCATCGCTTCAGGTCTGCGTAGAAGGTCGGGATACCGTACCAGCAGTATTCTTGAGTCCAACCAGCGTTCCAGCGTCACCACAACGGCGCAAGCGACGTGCGTCCCCAGCTGGACCATACCGTTCGCGCATGCGTCGCACCGTTAACCACTACACCCCTCAACCAGTTCTGCCTCCGGACCGAGATGGAACTGGCCTATTTATAGAATTGTCTGCAGGACTTTCCACGACAGAAACTGACGTGCTCTTGCATCTGGATGAGCCTCGACTACCTCAAATCAACGTCGGAAGGGATCATCAAGCGGAACTACCTGAACTCTGTAACGACCGCATAGATCTACATCGAGTGCCAGAGCAGCTTCTCTGGGACCCTGGCATCAATGATGTTCTGGATGATGCTGAAGTGCGTATGTTCACGGAACTGGCAATGTGCGCGGCTATGCCCGTCGGAGGTCACACACGGGAGTTCGCCCTGCAGACCCTCGGAGAATGCGGAGGAGACATCCGAGCGGCAACGCTTCGCCTCATGTCGCGACCTGCATCGCCTTCGCAACAAGAATCTCGCTGGACTCCGGAAGAAGTTGAGGCCTTCTTAGCTGGGCTTGGCCACTACGATAAGGATTTTTACAGGATTTCACAGCTGATAAGAACAAAAGACTCAAAGCAGTGCATACAGTTCTACTATTTCTGGAAGAAAGTGACTAAAGACTACAAGACGCTGTACTTACGAACCTGGCACATGGACCAGCAGGCCTCAGCACAAGGTTCAATAGGTCAAGTTACATCGCAAGGCGCTGCTTCCTGTACGTCGTCTCCAACTTCTTACGATGGTGAAGAGTTCCCATGCAAAATCTGCGGGAAAGTATTTAACAAAGTAAAAAGTCGTAGCGCACACATGAAGTCGCACCGGCCACTCGACGCCGAGCCGAAACGGCCAAAACTCGAAAAGCCTTATGAAAAGGTCGAGAGATCAGATGACAGACCCCACGCGACAGCTGAATACCAAAGCAAACCGCCTGCACAGTAA
- Protein Sequence
- MYHQHKHETSISPDVCNKIFGNASALAKHKLTHSDERKYVCITCAKAFKRQDHLNGHMLTHRNKKPYECKADGCGKSYCDARSLRRHTENHHQPTSDTSKNGSGSTSASGSEREPNSHRVASPISPARSNPPHSDSSNSGSEKSSGTNASGSGSGSGNGGGDSSPPHTPPTPVTPPARPKSNKASSSKAKTCATAQQGTQKCGSGGSGSGPSNGATGGVSTAASRPSDVKPVECNLCHRKFKNIPALNGHMRLHGGYFKKDSDSKKLDKKESSGPPLQTASVSVRALIEEKIISRRGATVTSTPSMGTSTDTVASRVGFVAPAPPPLSTIRTSVASPASPAATSAQFVSPRAPPIVTIATNITAAHRDSTLIELLKKGNSKVVKRSASDPGQSSPQQEFTFRPDLFGVSFNSDDGYFSPALNEDTFQFTTTSEQLEELASLEDYATVAASIRERSPVTFPSSRRLAAVLNSPLPESLADFGACHGGSPVPSPGIGYAANSPGLSYSTGDSPGLAYTAASPGGSYSTQPEPSPGLAYPTPPASHDAQSPAHTVPRASSPLSAAFFTATMSSQEEVEEALEEVLPEECRSLDAYALEPSPTPRRIMLNSEDPLLSSSPRDFTHQRPMRRHHRMIASTSVTAMHQWQHDTSSLQVCVEGRDTVPAVFLSPTSVPASPQRRKRRASPAGPYRSRMRRTVNHYTPQPVLPPDRDGTGLFIELSAGLSTTETDVLLHLDEPRLPQINVGRDHQAELPELCNDRIDLHRVPEQLLWDPGINDVLDDAEVRMFTELAMCAAMPVGGHTREFALQTLGECGGDIRAATLRLMSRPASPSQQESRWTPEEVEAFLAGLGHYDKDFYRISQLIRTKDSKQCIQFYYFWKKVTKDYKTLYLRTWHMDQQASAQGSIGQVTSQGAASCTSSPTSYDGEEFPCKICGKVFNKVKSRSAHMKSHRPLDAEPKRPKLEKPYEKVERSDDRPHATAEYQSKPPAQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00622450;
- 90% Identity
- iTF_01401844;
- 80% Identity
- iTF_00807179;