Hpse000884.1
Basic Information
- Gene Symbol
- SNAPC4
- Assembly
- GCA_947369225.1
- Location
- OX376334.1:2518529-2520868[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 8.6 7.5e+03 -2.5 0.1 22 34 226 239 225 248 0.75 2 5 1.8e-08 1.6e-05 25.3 0.1 1 45 257 303 257 304 0.94 3 5 6.3e-10 5.5e-07 30.0 0.2 2 44 311 357 310 359 0.93 4 5 2.4e-11 2.1e-08 34.5 0.0 1 43 363 405 363 407 0.97 5 5 5.8e-07 0.00051 20.5 0.0 4 45 419 462 418 463 0.96
Sequence Information
- Coding Sequence
- ATGGAGGTCGATTCGGACAGTGATGAGGAAACTCAAATTCAGGAGCTAAGTCAGCTGACAGCTGTATTGGAAGCTGACGAACCAGTAAGTGAGAATTGTTCACAGTACTCTGCAAGGAGCAGTCTATGTAGCTACTCTTCTAAAGTTGAACAGGAGTATTCCCATATTCAGTCTGCTCTTGCTCTAAATAAGCTAACTGACGAGAAACTGCGGCGGCTTGAAGGTATACTTTTTGTCCGATTACGTGAATGCCGTAAGAAACTGAAAGAAATCGACGGATCTCCGGTTCTCCTCTGCGACAAACAGGAGAAAACTTTCAGGTACATAAACTGTGGTAAGCCATACTTCAAGGGTCGAGACAATTTCCCAGCTCCTGACAATGAAGACACAAAGCTTATGGCCAAATCGAACATGTATGATTTTTCAAACGTCACCTGCGTTCCTGGTTGGACTGTAAAGGATAAGGGCGAATTTATCTCCATACTACACAAAATGTCACTTGATAAAAAAAGGGACAAATTACATTCGCAAATAGCTCAGTTAAAGCGCAATGCTAAAGGAAAAGCAATCAATAATAATAATTTGGAAAAATGTATTAATGCCATTATGAAAGAAATCGACGAACTCAAGAAAAAGTCTTTAGCTGAATTAGCATTACCAATCGATGAGGAATATGATTGGGACACTGTAGCCAACAAAACGAACTATAGGCACAGCCCACAAGAGTACCGGTCGTTGTGGAAATTGTTTTTGCACCCATCGATAAAAAAGAGCAGTTGGACTAAAACTGAGCATATGAATCTACAAAATATTGCTCATGCTAATAATTTACAAGACTGGGAGAAGATTGCTGAAGAGCTGGATACTGGACGAACTGCCTACCAATGCTTTGTTTATTTCCGTACAAACATGAGCAACACATTCACAGGACAAAAGTGGTCAAAGGAGGAAGAGGAATATCTCAAAAGGTTAATTGAATACTATAGAGAAGATGACTACATACCATGGAGCAAAGTAGCATCATTTATGGAGAACAGAACTAAAATCCAAATCTACAACAAATATGCTCGACTCATGGAACAGAGGAAAGGCAGGTTCCTACAGGAGGAAGATGCTGTAATTCTCACCTGTGTCAAAGAGTTTGGTCCGAACTTTAGGAGGATATCGAATTACCTGCCTGGTCGCTCAGCGTCACAGCTACGTGTGCGGTATCAGGTTTTAGCTGGTGCCAGGTGCACTGGGACATCTATTGTGTGGACAATAGAAGAAGATAAGAAGTTGATTCAATTAATGGCAAATCAAGACAGCTCAACAAACTACTCTAGTTTGACACAATATTTTCCAGGGAAAGACAGAGCGCATATCAGAGCCAGATATACGACGCTAGTGAAATGGATGAGAAAGCATCCTAATGCACATATCTCCAGGGCACCACGGAGAGGTGCTCGCCGACTTGGGCACGGTCAAGCCTCACAAGATTTGAATAAAGCTGTTGAGAACCTCAAGAACAGGATGCAGACTGAAGTTGACGGTAAAAGAATTAAAACGGTCAATGAAACTTCTGATGAAAATGCGATTGAGAAAGCAATTGTAACTTTTTTAATCAATGAGCAAATTAGAGAGGAAGAAGTCAAGAAAATTGAGCTTTCTTACAGTGAGCAGTCACTCCTGAAAGAACATTGTGATACCTCTTCGATCCCTTCGAACATTAAAAACTTGAAACAAACCCTTATATTTTTAAAAGCCAAATTGAGTAAAGACTGGTTTGCGAACAGTACCTATTATATTAATTATTCAGGACTGTTGCACGATAATTCAGACCGATGTCTTATTGTGAAATCGTATTCTAAAAAGAATACTGTAAAGATTCTTAATCTGAACTCACCTGATATATGGGGAGAAAATACATTAACCACATCAGAATATGTATTCCCACCGAATTACTCCACCGTCACTGGATGTAGAAAACTGATGGCATATATCAGTTCGAAAAATACCCATACTGAACGACAAATGAATATAGGCATACTCGTAAAGAGAAATGAAGTTTTGAAGGAGCAAATGAACCTTTTAATGGAGAGGTTCAAAACATTGTTCTTGTGGCCAATGTTGCTTTCTAACGATAGCCCGAAGTTACGCGTTAATCAATATATGCCAGTCAGTCAGTCACATCAACTTAACTGCAAAGTGTTTGGTGGAGATTCCGGAATAACAATCCCACCTATGGACATGGACATAGTGAATGATACTATAGATTTGGATGACTCTGCTGACAATGATGATATTGTTGTCAAGGATGTTTATGTTGGTAACAACGATTTTTTGTATATGAAACATTGA
- Protein Sequence
- MEVDSDSDEETQIQELSQLTAVLEADEPVSENCSQYSARSSLCSYSSKVEQEYSHIQSALALNKLTDEKLRRLEGILFVRLRECRKKLKEIDGSPVLLCDKQEKTFRYINCGKPYFKGRDNFPAPDNEDTKLMAKSNMYDFSNVTCVPGWTVKDKGEFISILHKMSLDKKRDKLHSQIAQLKRNAKGKAINNNNLEKCINAIMKEIDELKKKSLAELALPIDEEYDWDTVANKTNYRHSPQEYRSLWKLFLHPSIKKSSWTKTEHMNLQNIAHANNLQDWEKIAEELDTGRTAYQCFVYFRTNMSNTFTGQKWSKEEEEYLKRLIEYYREDDYIPWSKVASFMENRTKIQIYNKYARLMEQRKGRFLQEEDAVILTCVKEFGPNFRRISNYLPGRSASQLRVRYQVLAGARCTGTSIVWTIEEDKKLIQLMANQDSSTNYSSLTQYFPGKDRAHIRARYTTLVKWMRKHPNAHISRAPRRGARRLGHGQASQDLNKAVENLKNRMQTEVDGKRIKTVNETSDENAIEKAIVTFLINEQIREEEVKKIELSYSEQSLLKEHCDTSSIPSNIKNLKQTLIFLKAKLSKDWFANSTYYINYSGLLHDNSDRCLIVKSYSKKNTVKILNLNSPDIWGENTLTTSEYVFPPNYSTVTGCRKLMAYISSKNTHTERQMNIGILVKRNEVLKEQMNLLMERFKTLFLWPMLLSNDSPKLRVNQYMPVSQSHQLNCKVFGGDSGITIPPMDMDIVNDTIDLDDSADNDDIVVKDVYVGNNDFLYMKH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -