Hpse019926.1
Basic Information
- Gene Symbol
- Myb
- Assembly
- GCA_947369225.1
- Location
- OX376333.1:4434479-4455162[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.9e-16 2.5e-13 50.3 0.7 1 45 60 104 60 105 0.97 2 3 5.6e-21 4.9e-18 65.3 1.7 1 46 111 157 111 157 0.98 3 3 8.6e-20 7.5e-17 61.6 0.5 1 44 163 206 163 208 0.96
Sequence Information
- Coding Sequence
- ATGATCACGACTCTCAGCGATGAGGAACACGATTTAGAAAAAGAAGGTTGCATCATCCTTGTCCACAGACGCAGCGGCTATGAATCAGAGAGTAGCGAGTATTCAGAGGACTCGACAGCAGCATACGAAGATGTGTCGACTACAGCCAAAGGCGCTGGGTCGCGGAAGAATATCAACAGGGGACGGTGGACGAAGGACGAGGATAAAAGGCTAAAGAGCTACGTAAACATGTACAATGAGAACTGGGAGCTGATAGCCGCCCAGTTCACCGACAGATCCGACGTGCAGTGCCAGCAGCGCTGGACGAAGGTTGTCAACCCTGAGCTAGTCAAGGGCCCGTGGACCAAGGAGGAAGACGAAAAGGTGACGTCATTGGTCGCTAAATACGGGCCGAAGAAATGGACCTTAATAGCGCGGCACCTCAAGGGCAGGATAGGAAAACAGTGCAGAGAACGATGGCACAACCACTTAAACCCTTCAATAAAAAAGACCGCGTGGACGGAGCATGAAGACCGAGTCATATACCAAGCACACAAGCAACTCGGCAACCAGTGGGCCAAGATAGCAAAGCTTCTGCCTGGCAGGACAGACAACGCAATAAAAAACCACTGGAACTCAACAATGCGACGTAAATACGAGCCGGAACTCCTGGACAGTTTCGAGAGCCTTCGCCGCAAGACGCGGGTAACGCGGCCGAACGACTCCGTTAATATGGTAGACCGTAGCGCGCCTGTGCGAGTCGCCTTTAACGATAACTGGACAGATCCGTTCAACGAGTCCACCCAAAGCAATTCGTCGACAACAAGCCAACCGGCGTCCAAACAAGTACTACACTTCAGGCAACTCCTAAAGGACCAACTGAGCAACTTACAGCAACAACCGAGCAACTTACAGCAACAACCGAGCAACTTACAGCAACAACCGAGCAACTTACAGCAACAACCGAGCAACATACAGCAACAGCCAGTGAGGCAAAACTCGCCGGATAGAGGAGGCTTGGTCGCAGCGGACAACTTTGAGATCGTTGAGTCGCCTTTGAAATTCGTGAATATAGACACATTGCCTACAGACTCCCCGATTCAAAAATACTTGGCTCAAGCTTCAGTATCTAATGAAAACGTCAATCAGAATGCAGTAACATACGCTGTCCAGCCCCAATCGACTAAAGAGATCATAGTGCCAGCCGTATACACGTCTCCCAAGAAGAAATCTCAAGAATCCAACAGTCCTCCGCCAATCTTGAGGCGAAAGACGAGGAAGATGCAAGCTTTAGGAGTCAATCACAACCCCTGGTCAGAAACAATAACGAAAGCCCTGGAGGCCCGTGACACAGACGGGGTGACACCCATAAAGGCCCTTCCATTCAGTCCGTCGCAGTTCCTCAACTCGCCCGCCGCGTTGCCGTTCGATTCAACGCCGCTAAGGCAAGCGCAGCAAGGGGCCGCCAAGGAATGGGGTGCGAGTCCATTGCTACATACGCCGACACCAGCCAACAACACGCCCGGAACGAGCCTTCTAAAGAACAACACTCCCAAAACCCCAACGCCATTTAAACTAGCAATGGCGGAAATTGGCAAGAAATCTGGTCTTCGGTACGAGCCTTCAAGCCCCGGCCTCTTAGTGGAAGACATAACAGAAATGATCAAAAGGGAAGAGTCTGATAGCACTGTACAGCTCAATGATTCATTGATGTCTTGTACTGCCGATCAGGAAGGGGGAAATGTTCAGGTGAACGACTCCGGCATAGGCAGTCTAAAACGCCGAGTATCAGAGTCATCCCAACACGGAAAGGAGAACGTACCGGGAACAGTTCACAAGAAAGCGAGAAAAGCACTCGCAAGCACCTGGGGTGCTGCCACTAGCACTCCCCACGCCCATTCAACCCATCAGGCACTTGTACCGGACGTGTCTTTCATCGTTGAGACTCCCAGCAAAACCCTAGCCGGCGATAGCTCAGTAATGTTCTCACCGCCTTCGATAGTCAAGCATTCCCTTCTAGAAGAGTCCACCAGTCTTCACAGCCTAATGTCAGCAGAAAACACGCCAGAACCGACCAAATCCGACGAAATAGACATAGAAGCTGTCATCACCGAAAGAACCAAGGTACAACACAGGTCCTTAATCCATACTAATCCCGCTCCCATATACGAAATCTACGAACCCGACCAACCTATCTACCAAAACAACGTCTTCAAAGACATTACTAACGTGGAATCGCCTAGAACGTTCGCTAGGTTGAACGCAGAAAGACTTAGAACTATAACTTCGGGTAATGAAGTGTCTTGTGATAATGGCAGTAATTTAATAGCTCCGAAAGAGGTGTTAGCTAACGCTTTAGCTGACCATATATATAAAGTGACCAATCAGAAGCCTTCGACGTCGCGAATTGACGAGATTTTAACCAATAAAATCATGACAAGTAGACATAATGATTACGTTGAAAAGGAAAATCAATGGTGGCAAATGGAGAATAAAGATTCCGGGCAAACTGATGAGGGATTGTTTCCTAATGAATATTATATGTTTACTAATAATTACGTAGATTGA
- Protein Sequence
- MITTLSDEEHDLEKEGCIILVHRRSGYESESSEYSEDSTAAYEDVSTTAKGAGSRKNINRGRWTKDEDKRLKSYVNMYNENWELIAAQFTDRSDVQCQQRWTKVVNPELVKGPWTKEEDEKVTSLVAKYGPKKWTLIARHLKGRIGKQCRERWHNHLNPSIKKTAWTEHEDRVIYQAHKQLGNQWAKIAKLLPGRTDNAIKNHWNSTMRRKYEPELLDSFESLRRKTRVTRPNDSVNMVDRSAPVRVAFNDNWTDPFNESTQSNSSTTSQPASKQVLHFRQLLKDQLSNLQQQPSNLQQQPSNLQQQPSNLQQQPSNIQQQPVRQNSPDRGGLVAADNFEIVESPLKFVNIDTLPTDSPIQKYLAQASVSNENVNQNAVTYAVQPQSTKEIIVPAVYTSPKKKSQESNSPPPILRRKTRKMQALGVNHNPWSETITKALEARDTDGVTPIKALPFSPSQFLNSPAALPFDSTPLRQAQQGAAKEWGASPLLHTPTPANNTPGTSLLKNNTPKTPTPFKLAMAEIGKKSGLRYEPSSPGLLVEDITEMIKREESDSTVQLNDSLMSCTADQEGGNVQVNDSGIGSLKRRVSESSQHGKENVPGTVHKKARKALASTWGAATSTPHAHSTHQALVPDVSFIVETPSKTLAGDSSVMFSPPSIVKHSLLEESTSLHSLMSAENTPEPTKSDEIDIEAVITERTKVQHRSLIHTNPAPIYEIYEPDQPIYQNNVFKDITNVESPRTFARLNAERLRTITSGNEVSCDNGSNLIAPKEVLANALADHIYKVTNQKPSTSRIDEILTNKIMTSRHNDYVEKENQWWQMENKDSGQTDEGLFPNEYYMFTNNYVD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00674235;
- 90% Identity
- -
- 80% Identity
- -