Hpse011186.1
Basic Information
- Gene Symbol
- kn
- Assembly
- GCA_947369225.1
- Location
- OX376322.1:5363824-5391927[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.2e-93 1.7e-89 301.1 0.0 11 182 23 184 14 187 0.95
Sequence Information
- Coding Sequence
- ATGTTTGGCCTCCACCACCAAGAGGCGGCGGGAGGGCTTCACGCCCAACCTCGAGGACCTGTCACCTCTCTCAAGGAAGAACCTCTAACCCGCGCTTGGATGACTCCCACTTCGCTAGTTGACAATACCAACAGCGTGGGCGTGGGCCGGGCACACTTCGAGAAGCAGCCCCCCAGCAACCTGCGCAAGAGCAACTTCTTCCACTTCGTCGTGGCGCTGTACGACCGCGCCGGACAGCCTGTTGAGATCGAACGCACGGCTTTCATCGGGTTTATTGAAAAGGATCAGGAAGCTGAAGGCCAAAAGACAAATAACGGCATCCAGTATAGACTGCAGTTACTTTATGCTAATGGTATTAGACAAGAACAAGATATATTCGTCCGACTCATTGACTCGGTTACAAAACAGCCCATCGTATACGAAGGTCAAGACAAGAATCCAGAGATGTGCAGGGTTTTACTTACACATGAAGTTATGTGCAGTCGGTGTTGTGACAAGAAGAGTTGTGGAAATAGAAACGAAACGCCTTCAGACCCTGTCATCATAGACCGGTCAAACCCTCAAGGTCATAAAGCCGGGACCACACCGGCAGGTTTTGCCCGGCCCGGGCGCCCGAACTCGCCCAGCCCAAAACGCACCGATTTGGAGCCCGGGCACCGGGATATCGCCACAGACACGCCGGTCGATCGCGGTCTCCTCATTCTTATGTCGCCGCGATCCTCTTACAGAGGTGGTAATGGATGA
- Protein Sequence
- MFGLHHQEAAGGLHAQPRGPVTSLKEEPLTRAWMTPTSLVDNTNSVGVGRAHFEKQPPSNLRKSNFFHFVVALYDRAGQPVEIERTAFIGFIEKDQEAEGQKTNNGIQYRLQLLYANGIRQEQDIFVRLIDSVTKQPIVYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDRSNPQGHKAGTTPAGFARPGRPNSPSPKRTDLEPGHRDIATDTPVDRGLLILMSPRSSYRGGNG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -