Hpse012007.1
Basic Information
- Gene Symbol
- Atf3
- Assembly
- GCA_947369225.1
- Location
- OX376328.1:6901465-6909532[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.2e-15 2.1e-12 47.2 11.1 2 63 178 239 177 241 0.96 2 2 4.1 4e+03 -1.7 0.1 12 19 377 384 376 386 0.86
Sequence Information
- Coding Sequence
- ATGAATTCGACGAGCCTGAGCTCCGCTGTGCCGACGATAAAGTGCGAGGATTCGTCGCCGTCGCCGGCGGCCGCCGTGGGCACGGACACCGACGGCGGGGCCTACAACCTCAGCGTGAACGTCAATCTCAGTGCGGCAATGATCAACCTCCTCTCCGCTGAGAACCCGGGCCCCACCACGCTTCGGACGCCCGAGATCGTCAACGATGTAATAACCATGACCAATCCCCTGGACCAGTACAATTACGACAAAAATTCCGGTTTCAAGAGCGGAAGCGGAAACGACTCCAACTCTTCGATGTCCAATGGCTCGTCGGCTACTTCGCCAGCCTCGGGCACTCCACCCAGTATACAAAAGACGTGTTCGGAACTAATAAAGGCTGGCCTGAAGCTGTCGATCGAGTCGAAACGCAAGATGTCGGGCAGTGACACCGATGGGACGGTCAAGCGGCTGAAGCGTGAGGACAGTGATGAGGAATATGACAGCAGTCACACGCTGGCGCCCAAGGGCGAAGGGCTAACACCAGAGGACGAGGAAAGAAGGCGTCGCAGAAGAGAGCGCAACAAAATCGCAGCTACAAAGTGTCGAATGAAGAAGCGTGAACGGACGGTCAACCTGGTCACCGAGAGTGAAGTGTTGGAGACACAGAATATAGACTTGAAAACCCAACTGAAGGACTTGGAAGTTCAAAAGCGGCAGTTGATAGACATGTTATCTATGCACGCGTCGTCATGTATCAAGAACAACAATTCCCACACGCGGTCGTCGCCCACGACGACCCAGTACAACATGATCCGACCGTACGATTCGCCGACCACATTCCCCGCTGCCTACGAGGCTCACTCGCCGTACATCCGACCGGAGTCTGCCAACATCCTCGCCTCCAGTTACACCTGCGTCACTCCGCTGAACGGAGATTCCTCCATAGACACCATGTCGTCACTCGAAAACTCCTATATGACGCCTCAGCTCATGGACGCAATCGAATACAATAGGCCTGACAGTGTCTTGAGTTTGCAAGCAAATTCCGAAGGCAACTATGTCACCACGGATGGGTTTATGCCTAAAGCTACCAACCTTCTGGTTCCTATCGAAACCGAGCAGGAGTACTACGACCCCGATGCTAGCTACAACCTGGCCGCCCAGCAGTGCCACACGTACCCCAGCAACGGCGCAGACGCACAAAACAAACTAAACAATGGCCTTAACGACGGGTGCCTTGTCTAG
- Protein Sequence
- MNSTSLSSAVPTIKCEDSSPSPAAAVGTDTDGGAYNLSVNVNLSAAMINLLSAENPGPTTLRTPEIVNDVITMTNPLDQYNYDKNSGFKSGSGNDSNSSMSNGSSATSPASGTPPSIQKTCSELIKAGLKLSIESKRKMSGSDTDGTVKRLKREDSDEEYDSSHTLAPKGEGLTPEDEERRRRRRERNKIAATKCRMKKRERTVNLVTESEVLETQNIDLKTQLKDLEVQKRQLIDMLSMHASSCIKNNNSHTRSSPTTTQYNMIRPYDSPTTFPAAYEAHSPYIRPESANILASSYTCVTPLNGDSSIDTMSSLENSYMTPQLMDAIEYNRPDSVLSLQANSEGNYVTTDGFMPKATNLLVPIETEQEYYDPDASYNLAAQQCHTYPSNGADAQNKLNNGLNDGCLV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00207587;
- 90% Identity
- iTF_00994114; iTF_00674059; iTF_01401013;
- 80% Identity
- -