Hpse023279.1
Basic Information
- Gene Symbol
- XBP1
- Assembly
- GCA_947369225.1
- Location
- OX376314.1:12974794-12977357[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-18 1.3e-15 57.5 8.5 2 64 38 100 38 101 0.94 2 2 0.0012 1.2 9.6 0.3 33 55 83 105 82 108 0.91
Sequence Information
- Coding Sequence
- ATGAGCGCTCCCATAATAATCACCGTGCCCAACAACTACTTGGCGATGGAGGAGGATGACAACGTCGCGTCACCGCCGTCCAGGAAGCGGCGGCTCGACCACCTCTCGTGGGAGGAGAAGATGCAAAGAAAAAAACTCAAGAACCGCGTCGCAGCCCAGACATCGCGCGACCGGAAGAAGGCCAAAATGGACGAGATGGAGTCTCACATCGACGGATTGATGAAGGCGAACGAGCGATTGACGAGCGAGGTGGAGAGCCTTAAGGCTTTGAACGAGAGGTTATTGGGAGAGAACACAGCGCTACGCAGCGAGGCGGCGGCGCGGGACGTCGCGGGGGCCCGGGGACCGGCAGAGTCTACTCCTCGGCAGAAGGAGGGGCCCCCGGCGGCGCTCCGCGCGGCACGCCTGCTGCTGGCGATGTGTCTCCTCTCGCAGACCTCCTCGCACACCTCGACTCTGAAGAGTACCTCGATACCCTCCATCAACTTGCAGACTCCCTCCTCCAAGAAATTGATGCAAATTGTACAGGAGAGGCTGAGGATGTCTCAGTCCGGGACCCTAGAGAGTGCACTGAAAGAGCTCAAGTGGTGGGGACCGCAGCAAAGCACCTGGAATCCGATGAAGGTGCAGTCGTAG
- Protein Sequence
- MSAPIIITVPNNYLAMEEDDNVASPPSRKRRLDHLSWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMESHIDGLMKANERLTSEVESLKALNERLLGENTALRSEAAARDVAGARGPAESTPRQKEGPPAALRAARLLLAMCLLSQTSSHTSTLKSTSIPSINLQTPSSKKLMQIVQERLRMSQSGTLESALKELKWWGPQQSTWNPMKVQS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01491609;
- 90% Identity
- -
- 80% Identity
- -