Htri007545.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Hirtodrosophila trivittata
Gene Symbol
nfxl1
Assembly
GCA_035045065.1
Location
JAWNNK010000813.1:8189301-8192405[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 2 2.2e+04 -8.1 6.4 15 19 152 156 151 156 0.82
2 20 1.2 1.4e+04 -3.4 0.9 4 10 187 193 187 193 0.84
3 20 6.5e-08 0.00072 19.8 15.5 1 18 201 217 201 218 0.98
4 20 2 2.2e+04 -4.9 2.0 6 10 244 248 244 248 0.92
5 20 6.9e-08 0.00076 19.7 17.2 1 19 254 273 254 273 0.97
6 20 0.72 7.9e+03 -2.7 1.2 5 10 297 302 297 302 0.93
7 20 3.7e-09 4e-05 23.8 14.2 1 18 308 325 308 326 0.97
8 20 1.2 1.3e+04 -3.4 0.2 12 16 340 344 340 345 0.74
9 20 0.94 1e+04 -3.1 0.6 5 7 353 355 349 357 0.49
10 20 3.6e-08 0.0004 20.6 12.5 1 18 360 377 360 378 0.97
11 20 0.27 2.9e+03 -1.3 1.0 1 10 387 396 387 396 0.88
12 20 0.00033 3.6 8.0 17.3 1 18 412 429 412 430 0.97
13 20 6.8e-08 0.00075 19.8 14.6 3 19 441 457 433 457 0.85
14 20 1.2 1.3e+04 -3.4 0.7 6 10 485 489 484 489 0.87
15 20 0.0013 14 6.1 12.4 9 18 502 511 495 512 0.90
16 20 0.028 3.1e+02 1.8 5.1 1 11 524 533 524 534 0.95
17 20 4.3e-06 0.048 14.0 5.3 1 11 600 610 600 611 0.96
18 20 0.0034 37 4.7 13.6 4 19 641 656 639 656 0.93
19 20 1.7 1.9e+04 -3.9 1.6 8 13 661 666 660 666 0.74
20 20 3.2e-06 0.035 14.4 11.1 1 17 707 722 707 726 0.95

Sequence Information

Coding Sequence
ATggataaatttcataaagcaCATGAAAAAAATGTAGCAGCCGCACAGAAGCATAAGGATGATTGCTCATCCAGTTCGGAGGATGAAGGAGAATTGGATGAAAAACGTATTCTTGAATTACTATACAAACACTACCAGGGTTCGTCGGATGAACCAAGTGGTAGCAAGTCCATTGCCAAAAGTGCAAACCGTACATCTACATTCCTGGAAAACACTCTGCACTCGGGTGCGGCTACATGTTTAATATGCATTGGCAGTGTGAGACGCGTAGACTCCATATGGTCTTGCAAGAACTGCTATTGCATCTTCCATTTAAACTGTATCCAGCGTTGGGCCAATGATAGCGTCATGCAAATGAAAGTCAAGGCAGAGCAGCAATATGGCAATCACGGACACTATAACCACCTAGGCGAATATGTGCCGCCCAAACCTCCAACATCATTGCACTGGTGCTGCCCACAGTGCCGCAAGGAATACCAGTCGACAGAGCGGCCCACACAGTATGACTGTTTCTGCGGCAAGGAGCAAAATCCGCAGCCGCAACCATTTCTTGTGCCGCATTCCTGTGGCGAGAACTGTGGAAAATTGTTGCAGCCCAATTGCGGTCACGACTGCAAGTTGCTCTGCCATCCCGGTCCGTGTCCACCTTGCGCTCAATTAGCGCAAATTTCATGCCTATGTGGTAAATCACCGCCACGCTCGACGCGCTGCAACGACAAGACCTGGCTGTGCCAGCAAGCCTGTGAGGAGCTCTTGCCTTGTGGCAAACATACATGCAACCAAAGATGCCACAAGCCTGGCCAGTGCCCGCCTTGTAGCAACAGGAGCGCCCAGCACTGCTATTGCAAACGTGAGTTCAAAATTGTCAACTGTTTCGAGcccaaatggaaatgcaagAATGTTTGTGGCACTCTTTTTCCGTGTGGCGTGCACAAGTGCGACAAGGTTTGCCATGAAGGTCCTTGCGGGGAATGCAACTTGGGTGCACGCACCTGTCCCTGCGGCAAGACCAGCATAGACGGCCCCTGTAGGGATGTGGTAGAAACTTGTGGCGACACCTGCCAGAAGCCATTGTCCTGTGGCTCGCATACGTGTACGCAGCGCTGCCATCGCGGACGTTGTAACACGTGCTTGGTGATAACCATGAAGAAATGCCGCTGCGGATTGCATGAAAAGGAGCAGCCCTGCTCCAAGAGATTCAGCTGTGACACCAAATGTAAACAGATGCGCGATTGTGGCAGACACGCTTGCAACCGAAAGTGTTGTGGGAACCAGTGTCCGCCCTGTGAAAAGATTTGTGGCAAGCAACTCAACTGCAAGAAGCACAGGTGTCAATCCGTTTGCCACAACGGGCCCTGTTATCCCTGTAAGATGGAGACTCAGATGAACTGCCGCTGTGGCACAACACGACGTAACGTGCCCTGTGGACGCGAAAGGACTGCGCGCATTGCCTGCCCGGAGCTTTGCCGAATCACGCCGAAGTGTCATCATAGCATAAAACATCGTTGCCACAAAGGCGATTGCCCACCATGTGGTCAGCATTGTAACTTGCGCAATGATACCAGTGGCTGTGGACATATCTGCAGGGCACGTTGCCATGCAGCCATACGTATACCCATGCCACCGGAAGCTGCAGCATATCCAAATGTTAATAAGTATGACTACCGCGCACTGCCGCATCCACGTTGTGAGGAGAACGTTAAAGTCATTTGCATTGGTGGTCACAAGGAGGAGACCTGGCCCTGCTGGAACTCTAAGCCCACGTCCTGCCAGCGCGAATGTGCGCGCCAATTGAAGTGTGGCAATCACAAGTGCAGTCTGGTCTGTCATGTCGTACCAAATCCGCAGGacatgcagcagcaggatGGCTGTGCCAGCTGTGAGGAAGGTTGCACAGTCGCCCGGCCTTCAGGCTGCGTCCATGCCTGTGCCAAAGGCTGTCATCCGGCGCCCTGTGAGCCATGCAGTTTTGTCATCAAAAGCAAGTGCCACTGTGGCCTCAACCAGATTCTATACAAGTGCAGCGAGTTCTTCAAAGAACTGGGCACTACTCAAGAGATTACAGAGCAACGGGAGAAGCTACGTAGCTGTGGCAACCGTTGTCTGCAGAATTTTGCTTGTGGTCATCGCTGCATGACTATTTGCCACTCTGGGAAGTGTCCCAGTCCTGAGTTGTGCCGGAAGAAAGTGCGCATTTATTGTGCCTGCAAGCGGATCAAGCTTGAGGTATCCTGTGAAAAGCATCGGGCCGGTCAAACATCACTAGACTGTGATGCCAACTGCCAGGCCGAGCTcacaaaagccaaagctacGGAGCAGCATCAGTTGAAGGAAACCCAAAGACAGCAGGAGGAAAAGAATCGACTAGAGCTGGAGAAATTTGAGCAAAAGTTTGGAAAGCGTAAACCAAAGGAGCGCAAAGCTGTCGACATCAAGCCAACCAAATCGAACATCGATTGGAAACGTTACGCCATATGTGCTGTATCTCTTCTGATGGTCCTTGGTGCCCTTGCCGTTGCCTACTATGCCGACAACTAG
Protein Sequence
MDKFHKAHEKNVAAAQKHKDDCSSSSEDEGELDEKRILELLYKHYQGSSDEPSGSKSIAKSANRTSTFLENTLHSGAATCLICIGSVRRVDSIWSCKNCYCIFHLNCIQRWANDSVMQMKVKAEQQYGNHGHYNHLGEYVPPKPPTSLHWCCPQCRKEYQSTERPTQYDCFCGKEQNPQPQPFLVPHSCGENCGKLLQPNCGHDCKLLCHPGPCPPCAQLAQISCLCGKSPPRSTRCNDKTWLCQQACEELLPCGKHTCNQRCHKPGQCPPCSNRSAQHCYCKREFKIVNCFEPKWKCKNVCGTLFPCGVHKCDKVCHEGPCGECNLGARTCPCGKTSIDGPCRDVVETCGDTCQKPLSCGSHTCTQRCHRGRCNTCLVITMKKCRCGLHEKEQPCSKRFSCDTKCKQMRDCGRHACNRKCCGNQCPPCEKICGKQLNCKKHRCQSVCHNGPCYPCKMETQMNCRCGTTRRNVPCGRERTARIACPELCRITPKCHHSIKHRCHKGDCPPCGQHCNLRNDTSGCGHICRARCHAAIRIPMPPEAAAYPNVNKYDYRALPHPRCEENVKVICIGGHKEETWPCWNSKPTSCQRECARQLKCGNHKCSLVCHVVPNPQDMQQQDGCASCEEGCTVARPSGCVHACAKGCHPAPCEPCSFVIKSKCHCGLNQILYKCSEFFKELGTTQEITEQREKLRSCGNRCLQNFACGHRCMTICHSGKCPSPELCRKKVRIYCACKRIKLEVSCEKHRAGQTSLDCDANCQAELTKAKATEQHQLKETQRQQEEKNRLELEKFEQKFGKRKPKERKAVDIKPTKSNIDWKRYAICAVSLLMVLGALAVAYYADN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-