Htri010455.3
Basic Information
- Insect
- Hirtodrosophila trivittata
- Gene Symbol
- srp
- Assembly
- GCA_035045065.1
- Location
- JAWNNK010000855.1:12381850-12395187[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.7e-08 6.5e-05 22.7 0.1 1 21 905 925 905 926 0.93 2 2 4.3e-18 1.1e-14 54.1 2.0 1 35 1012 1045 1012 1046 0.97
Sequence Information
- Coding Sequence
- ATGACGAAGACAAGCAAAGCTAAGGGTAAAGATAAAAGTAGTGTATTGCCCCGTGTGCTGCCTCCTAATAGTTTGTTGACGAGTGCTGAAAAAATGAAAGTGACCAAAGCGCAGATCAACTCCAAAAAGCAAGCAGTGCAGAAGGGAGTTGGCGAAATGGCAACAGGATCAAatgcagcaacggcagcagccgTAGTAGCCTTAGCAGCGGGCACATTCACAGCATTCAGTCAAGCGCAACAGGCGGTTCCACTGAAAGAGACGGCAATAGCGGCACAGGAGAGCGGCGACAACGAAaaagacgacaacgacgacgtcgcgcataagcagcagcagcagcagctgcagcaacaacaaatacaagaagagcaacaacGCGTTAAAGCAGCGACGCcgacgtcgtcgttgtcgccGCTTGCCACAGCGAATTTATCGTCGACATTTGAGTCGAAGGCTCAAACATCAGCGACAGTTGACAGCGAAACAGCGAAGCAAACGGTTACCACGACACAAGCAACCGCAGTAACACCAGACGTACAAACATCAACGATAACTGTTAATGCAGCGACGATCTGTGCGGCACCGTTCAatacttttgttgtttatgaTGAGAACTTAACAAAGTCCAAGCTGCAGCCCAACAGTGACGTCACTAGCAATGTAGTTACAGTTAAAGTTACAGACGAGacggcaaataaaaataataatcaagaTAAAGTTGATCCCAAAACAGAAAGCGATACAAACCTagagacagcaacagcaccagcaacaacaacagcaacggcaactagcaataaatattacaaaatcgTTGATAAGTGCAAAAGTGAGATAAGTGATGAAAacacagtagcagcagcagcaacagaagtaACTTTGCCGGTTTTAgcgataaataataatcagcAAAGCGACGCGAGTGAAAGTGTtgacaacaaaatcaaaaCCAATTATgcgcatcaacagcagcagcagcagcagcaacagcaacaagcagagcaacaacacatatatgagcagcaacaatttttgcaacagcagctattAAACCAAcatcaccaacagcaacaggagcagcaacaacacgcCAGCTGGTTCGCATACAACAATTGTGCCTACGATTtgaccagcaccagcagtgcaacagcaacaacagcagcagcagcggcggcggcagcagcaacacaacagAGCAGTCAGCAACAGGACAAAAACGAATTGTATGCTCTGGCTGCCTCACAGCATTTACTGGCACATTTCCCGTACCACCACCCGCATCTGTacgagcagcagcacagcagtagcaacagcagcagcacggaTCCCATAATGCGAAACAATTTTATAGCTTATAGCGTGTATGGCGGTGGAGGTGGTGGAGGCGGCGGTGTTGATTCTCATCCgttgcagcaacatgttgctgctgcagcagcagcagcggctgccaATTCGGTTattgcacacacaacacacccCGCACCCAACATCGATGAGGTCATACAGGATACGCTGAAGGATGAGTGCTTCGATGATAATCACAGCTCCAGCTATCATATGCTAACCTCTGTGCCCGAATTGCAAGTGTTCAAGGATGCAAATGCGGTAATACAATACTCAATGACGCACGACcagttgttgcagcagcaacaacatctgcAACACCTTCATAATCTCCAGCAAcagccccaacaacaacaacaacaccatcatcatcagcagcaacaacaccagcaacatcaccagcaccaacaccatCATCATAATAATTCGGCCAGTTCAGTGGGCGGCGAttccccctctccctcccaTGTCTCCTCCTCAGCAAACGCCAGCGATGTGGCAACTCTGCAAAGTTTCACTCAATTGACCAGCGCAACACCAAGCAGCGGCCTGCATCGGGATAGCTACGGCAGCCTTTCTCCGGAGCATAGCAGCTACTTTACGACACAGCTCAGCCCAGTGCTACATACCAGTTCTGTTTATGCAAGTCCTTTGCTCGCTTCGGCCGCAAATGGTATGCAGTATGGCATGCAAAGTGTTGCGTCACCCACCCACTCGCACGCCCAGCTGCAACATcaccagcaacatcaacatcaccAACATCACAACTCAAGTAGCAATAGTCCTGGTCCAGTGGGTTTGCTCCACACCAGCAGCTCGGCAAGCTCagtagcagccgcagccgcggcagcagcagccactggaCACAGTTCGCTCCTGGATGATGGTTATGGTTCACCAAAGAGTAGCCACAGTGGCaacggtggtggtggtggcaccTTGCCCGCCTTTCAGCGCATTGCCTCAGCCAGCGGAGGAGGTGCTGGCTATGGCAACGGCGTATCCAATGGCTCTGCCAGTGGCGCCGAACGAACTGGTTACGCATCACTGACCAATTACCGCACACACAGCGATGCCTGGAATAATCATTACGACGCAATTAGCTATGCATCCACCACAGCCACCAGTCAGGGACAGCTGGGTGGCAGTACTTCCACTGTTGGTGCCGGAATCTCTGGAGCCGCTACCGGAGCCGGTGTCGGCGGAGCGGTAACCAATGTGATACGCAACGGACGCGACTTTGCCGTTGCAGCAGCGGCCGCTGTCGATGATCCTGCTCGCTTCCTGGCCAATGCCACTCATCTATCCGCCTCGGCATCGCTCACAGCAACATTACTCGATGCCGATTTTTTCACTGAGGGGCGAGAATGTGTCAATTGTGGTGCGATTTCGACTCCCTTATGGCGACGCGATAATACGGGACACTATTTATTGGCCGCTGAATCAGGCGGGGATTTCTATAAGACCTCCTACCCATTTAATGTGACCACCGTTCAAGTCCGCTCAAAGGCCACAACCGCAAGTGCTGCAAGCAGCGCTGCTACTGGCGCTGCCAATGCCGGTGCCGGTGCCAGCGCAGCGACgacatcgtcgtcgtcgtcatcaacCACCAACCCAACGGCGCTCGACGAGCACGTTAGTCGCGCCAATTCGAGACGCTTGAGCGCCTCTAGACGTGCCGGCATGTCCTGTTCCAATTGCCAAACAAGCTATACATCGCTGTGGCGCCGGAATCCTGGCGGAGAGCCTGTCTGCAATGCCTGTGGCCTTTACTTCAAGCTGCACAATGTGGTGCGTCCGCTAACCATGAAAAAGGACACCATACAGaaacgcaaacgcaaaccGAAGGGAACAAAGAGCGAGAAGTCAAAGAAGATGCGCACTTCCCAGACGTCCTCTGCATTGGTTGCAAGCAACCTCAATGCCTGCCACAACGTGGCACTGCAATTGGATGGCCATGGCCAGCAAATGGATGTCAATGATGAAATGAAACCACTTGCATATATGTCATAcacaacacagcagcagcagcaacagctacagcagcaacaacttaaCACTGAGCAACATTCATCAGCGGCAAGCTCGCCGCAAAGCATGGCCTCCTGCTCATTATCACCCAATGCAAcaccccagcagcagcaacagcagcagctctgtGCTGGCCTGGACATGTCACCTACATCCTCCTATCAAATGTCGCCCAttaacatgcagcagcagcagcaacaatcatgcagcatgcaacatTCACCTAGCACACCAACATCAGCCATGTCACATTCCATTTACTCAACGCCATCGCCCACGCAGcttcacaacaacaacaacaacaacacattgTTCAatcataataacaacaacaacaacaatagcaatgaaaataacaaacaaattatacagaaatatCTGCAAGCTCAACAattgagcagcaacaacaacaacagcagcatcagcgaacagcagcaattattggcacagcagcaacttaTGAACCTCATGCCGAACTCCAttacggcagcagcagcagctgcagtagcAGCGGTGATCAAATCGGAATcagtcagcaacaacagcaacaacaccagcaacagcaaacaattagctgccacaacagcaacaacaccgaCAACGGCATCGAACACACTATCCTCACTGAGcctgaacagcagcaacattatcCAACTGCAAAATCATTATCAGCAACAGCCGGCCATTATAAAACTGGAGCAATTggaacaccagcaacagcaccagcagcaacaacatgacGAACTCTTGCTTAAGTGTTCAACCTCAATCGATGAGCACTATGAACTGGCAGCCTATcaccgccagcagcagcagcagcaactacaggagcagcaacagctacagcaacatgttgcactCAGTTCACACGATCAGCAACAGATTACCAGCTATGCGTTGCATGCAgcggcacagcagcagctccatgAATTTGGACGCAAATATGGCGTTGAGCGGGAGACTGTCGTCAAAATGGAGTAA
- Protein Sequence
- MTKTSKAKGKDKSSVLPRVLPPNSLLTSAEKMKVTKAQINSKKQAVQKGVGEMATGSNAATAAAVVALAAGTFTAFSQAQQAVPLKETAIAAQESGDNEKDDNDDVAHKQQQQQLQQQQIQEEQQRVKAATPTSSLSPLATANLSSTFESKAQTSATVDSETAKQTVTTTQATAVTPDVQTSTITVNAATICAAPFNTFVVYDENLTKSKLQPNSDVTSNVVTVKVTDETANKNNNQDKVDPKTESDTNLETATAPATTTATATSNKYYKIVDKCKSEISDENTVAAAATEVTLPVLAINNNQQSDASESVDNKIKTNYAHQQQQQQQQQQQAEQQHIYEQQQFLQQQLLNQHHQQQQEQQQHASWFAYNNCAYDLTSTSSATATTAAAAAAAAATQQSSQQQDKNELYALAASQHLLAHFPYHHPHLYEQQHSSSNSSSTDPIMRNNFIAYSVYGGGGGGGGGVDSHPLQQHVAAAAAAAAANSVIAHTTHPAPNIDEVIQDTLKDECFDDNHSSSYHMLTSVPELQVFKDANAVIQYSMTHDQLLQQQQHLQHLHNLQQQPQQQQQHHHHQQQQHQQHHQHQHHHHNNSASSVGGDSPSPSHVSSSANASDVATLQSFTQLTSATPSSGLHRDSYGSLSPEHSSYFTTQLSPVLHTSSVYASPLLASAANGMQYGMQSVASPTHSHAQLQHHQQHQHHQHHNSSSNSPGPVGLLHTSSSASSVAAAAAAAAATGHSSLLDDGYGSPKSSHSGNGGGGGTLPAFQRIASASGGGAGYGNGVSNGSASGAERTGYASLTNYRTHSDAWNNHYDAISYASTTATSQGQLGGSTSTVGAGISGAATGAGVGGAVTNVIRNGRDFAVAAAAAVDDPARFLANATHLSASASLTATLLDADFFTEGRECVNCGAISTPLWRRDNTGHYLLAAESGGDFYKTSYPFNVTTVQVRSKATTASAASSAATGAANAGAGASAATTSSSSSSTTNPTALDEHVSRANSRRLSASRRAGMSCSNCQTSYTSLWRRNPGGEPVCNACGLYFKLHNVVRPLTMKKDTIQKRKRKPKGTKSEKSKKMRTSQTSSALVASNLNACHNVALQLDGHGQQMDVNDEMKPLAYMSYTTQQQQQQLQQQQLNTEQHSSAASSPQSMASCSLSPNATPQQQQQQQLCAGLDMSPTSSYQMSPINMQQQQQQSCSMQHSPSTPTSAMSHSIYSTPSPTQLHNNNNNNTLFNHNNNNNNNSNENNKQIIQKYLQAQQLSSNNNNSSISEQQQLLAQQQLMNLMPNSITAAAAAAVAAVIKSESVSNNSNNTSNSKQLAATTATTPTTASNTLSSLSLNSSNIIQLQNHYQQQPAIIKLEQLEHQQQHQQQQHDELLLKCSTSIDEHYELAAYHRQQQQQQLQEQQQLQQHVALSSHDQQQITSYALHAAAQQQLHEFGRKYGVERETVVKME
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -