Basic Information

Insect: Hirtodrosophila trivittata
Gene Symbol: -
Assembly: GCA_035045065.1
Location: JAWNNK010000855.1:8676855-8707574[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.16 13 6.7 1.8 1 23 1400 1423 1400 1423 0.95

2 8 0.21 17 6.4 1.5 1 23 1428 1451 1428 1451 0.96

3 8 0.015 1.3 10.0 0.6 3 23 1653 1674 1651 1674 0.89

4 8 0.019 1.6 9.6 0.3 2 23 1683 1704 1682 1704 0.96

5 8 0.051 4.3 8.3 0.3 1 23 1711 1734 1711 1734 0.96

6 8 2e-05 0.0017 19.0 1.4 1 23 1740 1762 1740 1762 0.97

7 8 3.8e-06 0.00032 21.3 0.6 1 23 1767 1789 1767 1789 0.99

8 8 0.0087 0.73 10.7 4.0 1 23 1795 1817 1795 1817 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.16	13	6.7	1.8	1	23	1400	1423	1400	1423	0.95
2	8	0.21	17	6.4	1.5	1	23	1428	1451	1428	1451	0.96
3	8	0.015	1.3	10.0	0.6	3	23	1653	1674	1651	1674	0.89
4	8	0.019	1.6	9.6	0.3	2	23	1683	1704	1682	1704	0.96
5	8	0.051	4.3	8.3	0.3	1	23	1711	1734	1711	1734	0.96
6	8	2e-05	0.0017	19.0	1.4	1	23	1740	1762	1740	1762	0.97
7	8	3.8e-06	0.00032	21.3	0.6	1	23	1767	1789	1767	1789	0.99
8	8	0.0087	0.73	10.7	4.0	1	23	1795	1817	1795	1817	0.99

Sequence Information

Coding Sequence: atgagtGCCAATAAGCGACGACGCAACagtagctgcagcagcagcagcaattggtTGTGGCAAAAAccgcaaaagcaacaaattgccGCAGCTGATCAAGTGAAGGCCTTAAAGGATACACCAGCAAGTGGCGGTAGCATTCAAACAATTGACGTTGGCTCCGGCGATGAGATGAAACTTGAAATGGCCCGTATATGTCGTTGTTGTAGCAAAGGCGACCGGGAATTGCTAAGTCTGTTCGACGCCAGTGATGAGACAGCCAAacatacagcaacaacagaagatCGTCATCAGCAGCCTACATTGTCCATACGCCAACGCAAaatagcagtagcagcaacagcaaaagcaacaataaaagcaacagccacaacatcCACACAGCAACAGCGTAAAAGTGATAATCCCGTGGAGTATGCACTAAGTGGAACACACAGCAGCATGGCTACTGTCCTCGAAGAGATGGTCATTTGGATGCTTAATATCTCATGCAACGATGGACTGCCCCAGGCCATATGCCGGCAATGTATGGCACAGTTTATTATGGTTGCCAAGTTCCGGCGGCGCTGCATTCGCGTGCAACAGCGTTTACATGAGATATCTATTTGTGGCCGTCCTTCTGCCAAGCCACAGTTGAAGTCAATCAAACAGTCACATAAAAAGTCAAGAGTGCAAATGGAGCAGCAGTCGAAGGAGCAGCCACAGGAGCTGCAACCACAACAGCCACTAGCCGAACCGCCAGTGGAAGATTATATGCATCTGCCACAGACACAATTGGAGCGTAAGCGTCATCTGGTGCAGGGCACCGAGTCCGAGTCGGCACCATTGGAACCCAAAAAGAGCAAGACTGATGCCGAAATGGAAGTGCCATTAAAGATGAAACATACTCACATGAGAGTCCGCAACAAGAGGCTCGCCTCATTGCCAGCCCACATAATAGACGCCGGCGAGATAACCCCAAGAAACATCTCACAGAACGAAGAGAAAAATTTGACATTCAAAGATGTGCAACTGCCCTGGAAAACGAAGGCAGCACGCAAAGAGCTTTCTGGAACATGGTCTATGCCCGCAAGCTGCACACCGGATCTTGACACAAGAGTCCCAGTGCTCAGCAGTAATTCCGTGGATCCGTTGCGTGGATTTGATAGTGATGGCAACTCGTCAACAACTTTGTCATCATCTGGCGACTCACGGCCTCACTCACTTCGCAACACCAAACTCGTGTTTCCACCAAAACGTTCACcccaaaagccaaaaccgcCACTGCGGCGTGGACGACGCCCTCGTGCGACACTCAATTATGGGCCGGCAAAGCGTCCCAGAACCGTTGTAAAGAGAATTTCAGCTGCAGCAAAGGCTAAATTAATGGAACAAAGCGTCAATGCATCCAACTCTGATGAGCAGACCCCTGGCCAAAGTGAGCCAAGAGATCAGTCTACTGTTACGATACTACTTGAGGAAATTGATAACTCCAGCTTGGATGACATGCCGCGCAGCAGCTCTGATGACTACTTAGATACCAACTCTGAAGGAAAACTGTTAAGCACAGCGGATGAGTCGAGCTTACCACCCACTGAGACAGGCCTACTGACATCGGAGATGCTGACCAACGCATCGCCCACCGCCTTTGAGGTTGCAGAGGAGATCCCAACGACATACTCAACTGATGTACAACATCAACCGCAACTCCCTGTGGCCGAAAGGGAATCCGCTATGACACAAGCCGCTCCAATGTTGGAGGAGCCAACGCTTCAAATCCATTCAGCTATTTCCGATGAGCTGCTGATGAACGCAGAGCCAGTAAGCAATACCTTAAGCAGTATGCCTCAGGCCTATGAGTTACCTCTGCAAATCATATCAAATGAAGCTATTGAAGCGAACGAACCAATGATAGATGATGCGTGTAATGAGACACCATTGGAACTGTCTACCcctgaaactgaaactcaagCCGCTCCGGAAACTGTCAGTGCTATACAGTCGCCTGTGGCGATGATTCCAGTGCAATTTGAAGAACTAAGCTCATCATTAGCTGAAAGACAATCTGTGACGCCCGATGTGCCGCCACCTGCTCAATGCGAACTCGATGTCAGTATTACAAATAATGAGCAAGTGGAGCACATGAATGGGCTAATTGTGAGCATACCGCTAAATGTGCTGAATATGGAACTGAAGCGCAAACTCTGTGGCACCCAGACTGAAAAGCAGGTGAAGCCAGTGCAGGAAAGAAACGAGATGGAAGCGGGGACTGAGGCTGacgctgaggctgaggcagaggcagaaacAAGTGATGAGGATAGCTCAGATAACGAGCATAAAGATTCTATGGACGCCGACGATGTGAACAACAATGAGAATGCCGAGAATGAGAATTTTTGCCAGAGTGCTACAGCGGATAGCTTCAATTCTGCTGTGGCACtcgtattaaataaaattgaagcaGAACCAAATGGTGGGTGCACCCAAGACGATCCGGGTGATGATAGCGATGACGATATGGAATCACTAAAGCGTCTTGTTGCACTGCCATTGCACGACGACAAACAAGACAAGAAGAATGTAGACCAACACATAGAGTTCGGCGGCATACAATTGACACGCGAAAATGCAACCCCTATGGATTTTTTGGCCGAATTTGAGAAGCATTGTGAAAAGACCCTGAAATTACAGACGGCTGTATCCGTGCCGCCGCTTGAATTACAACTGGAAGAGGCCAAACAGCAGCTGGAGGTGGAGATGAATGATGTTGAGACGACACTGCACGGCATATTGAATGAGATGCAAGACGACCATCTCTATACACCTGTCTGTGAGCCCATTGATGAATTTTTATCTCCCGCTGACTATGCACCGCTCTCCGAACCGGAGACGTCGCCGACGGCAACACCACCATCCTCACATATCTATGAAACAGACGAACAGCAAGTttcacagcaacagccacagatCAAGGATGCAAATCTCTTTGATAGCAGCAACTTTAGCAACGAGCTTATCGGCTTCCAAAATGATATGCCGTGctttgaaaatattgaagcTACTCCCGAATCTGTGGCGGCTCAGCAGAGTCTGCAGCTGGCTGAACTGACGCAATTTCTCAATGAGTTGCAGccagcacagcagcagctgcagcaacaacagcaactgcagcagctacagcatcagcagcagcagcagctacatcaacaccaacagttacagcagcaacaccagcaacaagtACAGCTGCAACACATTCAACACGTACAACAGACACAGCCAGCGGtgcagcagttgcaattgcCGCCGGAGACTGTTAACTATGAAACACTCTATCAGCCAGCACCAGtcgcagcggcaacagcaacgcatTTGTCtccaggcaacagcaacaacaagctgcaACTCATTCAAATGACGCCACAGGAGACGCTGTGGCATGCACAGAACGCACCACAGCAGACTACACATTTGCAATGGTCCACCGTGGGTGGATTGGAAGCCGTCAAATCGACAAGTATTCCCAGCTTGGACACTTTGGACACCAGCACAGGAACCACAACGTACTATATCAATGCCAATGATCTCTACCAGACGCAGATGCAACAGCCGACCAACGATACCTATGCCATGTTGGATAACAATGAAAATTACGTtcttgagcagcagcagcagcaacaacagcagcagcagcagctacagcaacaacaacaacaacagcagcagcagcaacaacaacaacagcagcagcagcaaccgatTATGATACTAATTCAGCAACCCGAACTACAGCAGCCCGTTGCCTCTGCTAGTAATCCTCAACAAGCGCCACTCCACATCACGTATGGTGCAAATCTAACTAATGATTTACACGCgtaccaaaagcaacaacaacaacagcagcagcaacagcagcaacaacagcagcagcaacagcaggtgGTGCCCAGTCAGCAACACCTCCAACAGCAGcacgcccagcagcagcagcagcagcagcaacacactcaactacagcagaagcaacaacagaagcaacaaaagaaacaacaacagaaaccaCAAGAACATACAGTATTAGGCATACCACCAGTTGCCCCGCCCCCTAGGGGACGCCCCCCAATGCTTAAGTGCCGATTCTGTCAGAATGGGCCACGTTTCTCGAGCAGCTTAGAATATAGCCGTCACATTATTGAGCTGCATCCGGCTGACGCGCCCTTCAACTGTCCGCACTGCCCGCTGGCATTTGCGGGTCGGAACAAGCGCCACCAGCACATACTCAGCAGCCATGTGGTGCAGCAGTTCCACTGCGGCCAGTGCTCACAAATGTTTCCCGCTCAACGTTCCCTCGATCTGCACCTGCAACGCTTTCATATGCCGTACACCACAGAAGCCGCAAACGGAGTTGCTTCTGGTGTGCGACTAGATGAGGTTCAACTCCAATTGACCACCAATGAGCCACATCCTCAGATATTGTCCCTAGCGCAAGGATCGCCTCGTATCCCAGCTCTGGAACGACAAAAAAGCCCGTCAAAACCACGTAAGACGCGCATACTTTGCTGTCCCGACTGCGAGGATTGCCCTTCTGCACCTGGCCATCATCACGAAAATGGTACGCCAAATTATGAGGAGTTGGGCAAATTGCAGCCACCGCCAACAGTGTTGACACCCCCGTCGACGATAGCATCGTTGCCATCGCCACAGCCGATGAACATTACGCCGCACATAACGATGCCGTCACCGGAGCAATCGGAACCAGACTCAACAACCGCAACGTTGCGACAATTCCGGAAGCGATGCGTAGCCACAGGCACGTctacgccaacaacaacaacaacaacagcagcagcaacaacggcaaatACAGCAATGTTAACAGCAGTAGCATCGCCTTCACCTTCgtcgtcgccatcgtcgtcgaCAATGATGGAAGCGGCTGCAACGCTGCAACTGGGTAAATTACGGAGCAACCACGACTGCATCGTCTGTGATAAGCAATTCACCAATGTCATTGCACTCCGCAAGCACCAGCAACTGGCCCATGATTCCCAGTCGACCATGCCATGGGTCTGTGCGATTTGCAAGCGGGGATACAGGAAACGCATTGACATGGATAATCACATGAAATCGCACGAGGCGAAGGGACGACCGTACGAGTGCAACGAGTGCTGGGTTCGTTTTCCGGAGTTTAAACAGTTGGCTATGCACAAGTTCACAGTACATGAACTAATCAAGCCGCACACATGCGACGAGTGTGGCAAACAATTTGGTACGGAGAGCGCCTTGAAGACGCACATTAAGTTTCACGGTGAGCGCGGCTTCCAGTGCGAAGAATGCGATGAGGTATTCGCCTATATCAAAGATTTACGCAAACATCGCCGCACCCACAACAGCGAACTCTTTTACAAATGCGATAGCTGTCCGCGCACGTTTCTACATTTTACGAGCTTTCGTGCGCATATGAATACGCATCTACCGCTAGGtgtatttattaacgatcagGCAACTCCACCGCTGAGCTGCCTAGGCAAAATAGAGAATCCAGCTACACCTGCAACACCTGGAACCCTTGATCATGAATCACTACCAATGACGCCATTAAGCAATTTCAATGgtaacggcagcaacagcgaggATTGCCCAGGCTCTGTGGAAATGGTGGAAAGTAGCATTGCGCCAACGCTGGAGATGATCGTTGACACCCCATAA
Protein Sequence: MSANKRRRNSSCSSSSNWLWQKPQKQQIAAADQVKALKDTPASGGSIQTIDVGSGDEMKLEMARICRCCSKGDRELLSLFDASDETAKHTATTEDRHQQPTLSIRQRKIAVAATAKATIKATATTSTQQQRKSDNPVEYALSGTHSSMATVLEEMVIWMLNISCNDGLPQAICRQCMAQFIMVAKFRRRCIRVQQRLHEISICGRPSAKPQLKSIKQSHKKSRVQMEQQSKEQPQELQPQQPLAEPPVEDYMHLPQTQLERKRHLVQGTESESAPLEPKKSKTDAEMEVPLKMKHTHMRVRNKRLASLPAHIIDAGEITPRNISQNEEKNLTFKDVQLPWKTKAARKELSGTWSMPASCTPDLDTRVPVLSSNSVDPLRGFDSDGNSSTTLSSSGDSRPHSLRNTKLVFPPKRSPQKPKPPLRRGRRPRATLNYGPAKRPRTVVKRISAAAKAKLMEQSVNASNSDEQTPGQSEPRDQSTVTILLEEIDNSSLDDMPRSSSDDYLDTNSEGKLLSTADESSLPPTETGLLTSEMLTNASPTAFEVAEEIPTTYSTDVQHQPQLPVAERESAMTQAAPMLEEPTLQIHSAISDELLMNAEPVSNTLSSMPQAYELPLQIISNEAIEANEPMIDDACNETPLELSTPETETQAAPETVSAIQSPVAMIPVQFEELSSSLAERQSVTPDVPPPAQCELDVSITNNEQVEHMNGLIVSIPLNVLNMELKRKLCGTQTEKQVKPVQERNEMEAGTEADAEAEAEAETSDEDSSDNEHKDSMDADDVNNNENAENENFCQSATADSFNSAVALVLNKIEAEPNGGCTQDDPGDDSDDDMESLKRLVALPLHDDKQDKKNVDQHIEFGGIQLTRENATPMDFLAEFEKHCEKTLKLQTAVSVPPLELQLEEAKQQLEVEMNDVETTLHGILNEMQDDHLYTPVCEPIDEFLSPADYAPLSEPETSPTATPPSSHIYETDEQQVSQQQPQIKDANLFDSSNFSNELIGFQNDMPCFENIEATPESVAAQQSLQLAELTQFLNELQPAQQQLQQQQQLQQLQHQQQQQLHQHQQLQQQHQQQVQLQHIQHVQQTQPAVQQLQLPPETVNYETLYQPAPVAAATATHLSPGNSNNKLQLIQMTPQETLWHAQNAPQQTTHLQWSTVGGLEAVKSTSIPSLDTLDTSTGTTTYYINANDLYQTQMQQPTNDTYAMLDNNENYVLEQQQQQQQQQQQLQQQQQQQQQQQQQQQQQQQPIMILIQQPELQQPVASASNPQQAPLHITYGANLTNDLHAYQKQQQQQQQQQQQQQQQQQQVVPSQQHLQQQHAQQQQQQQQHTQLQQKQQQKQQKKQQQKPQEHTVLGIPPVAPPPRGRPPMLKCRFCQNGPRFSSSLEYSRHIIELHPADAPFNCPHCPLAFAGRNKRHQHILSSHVVQQFHCGQCSQMFPAQRSLDLHLQRFHMPYTTEAANGVASGVRLDEVQLQLTTNEPHPQILSLAQGSPRIPALERQKSPSKPRKTRILCCPDCEDCPSAPGHHHENGTPNYEELGKLQPPPTVLTPPSTIASLPSPQPMNITPHITMPSPEQSEPDSTTATLRQFRKRCVATGTSTPTTTTTTAAATTANTAMLTAVASPSPSSSPSSSTMMEAAATLQLGKLRSNHDCIVCDKQFTNVIALRKHQQLAHDSQSTMPWVCAICKRGYRKRIDMDNHMKSHEAKGRPYECNECWVRFPEFKQLAMHKFTVHELIKPHTCDECGKQFGTESALKTHIKFHGERGFQCEECDEVFAYIKDLRKHRRTHNSELFYKCDSCPRTFLHFTSFRAHMNTHLPLGVFINDQATPPLSCLGKIENPATPATPGTLDHESLPMTPLSNFNGNGSNSEDCPGSVEMVESSIAPTLEMIVDTP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -