Basic Information

Insect: Hirtodrosophila trivittata
Gene Symbol: -
Assembly: GCA_035045065.1
Location: JAWNNK010000855.1:3171285-3175948[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 26 0.001 0.084 13.7 1.3 1 23 214 236 214 236 0.96

2 26 0.38 32 5.5 2.7 1 23 242 264 242 264 0.97

3 26 0.055 4.6 8.2 0.7 2 23 296 317 295 317 0.96

4 26 0.0074 0.62 10.9 1.8 1 23 394 417 394 417 0.94

5 26 7.8 6.5e+02 1.4 1.1 1 20 457 476 457 478 0.85

6 26 0.81 68 4.5 2.5 1 23 501 523 501 523 0.98

7 26 0.23 20 6.2 0.4 1 23 604 627 604 627 0.97

8 26 0.16 14 6.7 0.1 2 22 636 656 635 656 0.89

9 26 3.3 2.8e+02 2.6 3.9 1 23 665 688 665 688 0.94

10 26 0.00024 0.02 15.6 0.3 2 23 713 734 712 734 0.97

11 26 1.9e-05 0.0016 19.1 5.4 1 23 742 764 742 764 0.99

12 26 9.2 7.7e+02 1.2 1.3 11 23 809 821 799 821 0.76

13 26 0.028 2.4 9.1 0.9 1 23 910 933 910 933 0.92

14 26 0.1 8.8 7.3 2.3 2 21 941 960 940 961 0.93

15 26 0.24 20 6.2 0.2 1 23 970 993 970 993 0.87

16 26 7.4e-06 0.00062 20.4 2.1 1 23 1018 1040 1018 1040 0.98

17 26 0.00085 0.071 13.9 1.2 1 23 1047 1069 1047 1069 0.98

18 26 0.00082 0.069 13.9 0.0 2 21 1096 1115 1095 1116 0.93

19 26 0.0076 0.64 10.9 4.7 1 23 1161 1184 1161 1184 0.96

20 26 0.16 13 6.7 1.1 1 23 1221 1244 1221 1244 0.96

21 26 0.00097 0.081 13.7 3.5 1 23 1268 1291 1268 1291 0.97

22 26 1.4e-05 0.0011 19.5 0.1 2 23 1319 1340 1318 1340 0.95

23 26 0.00023 0.02 15.7 3.1 1 23 1346 1368 1346 1368 0.99

24 26 3.8e-06 0.00032 21.3 2.0 1 23 1374 1396 1374 1396 0.97

25 26 5.8e-08 4.9e-06 27.0 2.4 1 23 1402 1424 1402 1424 0.99

26 26 0.0037 0.31 11.9 0.9 1 21 1430 1450 1430 1454 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	26	0.001	0.084	13.7	1.3	1	23	214	236	214	236	0.96
2	26	0.38	32	5.5	2.7	1	23	242	264	242	264	0.97
3	26	0.055	4.6	8.2	0.7	2	23	296	317	295	317	0.96
4	26	0.0074	0.62	10.9	1.8	1	23	394	417	394	417	0.94
5	26	7.8	6.5e+02	1.4	1.1	1	20	457	476	457	478	0.85
6	26	0.81	68	4.5	2.5	1	23	501	523	501	523	0.98
7	26	0.23	20	6.2	0.4	1	23	604	627	604	627	0.97
8	26	0.16	14	6.7	0.1	2	22	636	656	635	656	0.89
9	26	3.3	2.8e+02	2.6	3.9	1	23	665	688	665	688	0.94
10	26	0.00024	0.02	15.6	0.3	2	23	713	734	712	734	0.97
11	26	1.9e-05	0.0016	19.1	5.4	1	23	742	764	742	764	0.99
12	26	9.2	7.7e+02	1.2	1.3	11	23	809	821	799	821	0.76
13	26	0.028	2.4	9.1	0.9	1	23	910	933	910	933	0.92
14	26	0.1	8.8	7.3	2.3	2	21	941	960	940	961	0.93
15	26	0.24	20	6.2	0.2	1	23	970	993	970	993	0.87
16	26	7.4e-06	0.00062	20.4	2.1	1	23	1018	1040	1018	1040	0.98
17	26	0.00085	0.071	13.9	1.2	1	23	1047	1069	1047	1069	0.98
18	26	0.00082	0.069	13.9	0.0	2	21	1096	1115	1095	1116	0.93
19	26	0.0076	0.64	10.9	4.7	1	23	1161	1184	1161	1184	0.96
20	26	0.16	13	6.7	1.1	1	23	1221	1244	1221	1244	0.96
21	26	0.00097	0.081	13.7	3.5	1	23	1268	1291	1268	1291	0.97
22	26	1.4e-05	0.0011	19.5	0.1	2	23	1319	1340	1318	1340	0.95
23	26	0.00023	0.02	15.7	3.1	1	23	1346	1368	1346	1368	0.99
24	26	3.8e-06	0.00032	21.3	2.0	1	23	1374	1396	1374	1396	0.97
25	26	5.8e-08	4.9e-06	27.0	2.4	1	23	1402	1424	1402	1424	0.99
26	26	0.0037	0.31	11.9	0.9	1	21	1430	1450	1430	1454	0.91

Sequence Information

Coding Sequence: atgttgCCAACTGAAATTTGTCGCACGTGTGCGGTACAAGATGGCAAAATGCTGGCACTTGCGACGCGTATTGAGAAATATGGGAGTAAAAGTTATAGCGACGTGTTGCATGAATTAACGCAGATAGATcccTTGCTAGAAGAAAATGATGATAGTTTGCCGCAGTATTTGTGTGGGAGCTGCCTGCCTAAACTGGAAGATGCATACACATTTGTGTTGCAGGCCCGTCAGGTAAATGAGCAAATGTTGCTTAAACTACGCACTGGATTGCATACACAGTGCCTGGATGAGACGCCAATAGAAATATCAATGGAGCACATAAAGACGGAAATGGACATCGATTTGAGCACTGACTCAAATAAGGAAACACAGAACGCAGTCGTATTAGGTGATGATGATAAGGAAGTTTCTACTCTGTATGTTGCTGATTCAAAGTGGCAGCCGGAAAGTGACAGTGATATCTCTCATGAAAATGAAACGGAACTTAAAGAAACGCAGCTGCGGCGTAGTTCACGGAAGGCTAAGCTTTCCACAAACAACGAGAATGAAGAACCCTCTGCCAAAGAAAATTCCGGCAAACGTCGTCGGGGGCGTCCTAGGCGCCTAGCCAAAATTGAGTCGATTAATGAGGACGGCCGACATGCCTGCAAGGTGTGCGGAAAAACGTTTTCATGGTATCGCGACATGCAACGTCACGCTCGAATACACTTTGAACAGGCTACCTACGAGTGTGAGAGCTGCAGCAAGAGCTTTCTCCGTAAGGATAAATACATGTTTCACCTACGGTCGCACGAAAAACGTGAAGCAAAATGTCGGGCACTGCAGCTCGGAGACGAATGGCGCTTTGCGGAGCGCCTTTACAGTTCGGGTCGGCTCAAACGTATTGAGTGTAAATTATGCGGCATAAAGTGCCAGCGCATACAGGAACTACGTGTGCATGTGTCCAGTCATGTCAACATTGACACATTATCTACTCTTAGCGTAGACAGTGATGTTGTTAGAGAAGAGTTTTCGAGCCAGCAGCTGAATTTGGACTTGACGCAAATCAAGCAGCAGGTGTGCACAGAGCTCGCTAATGAACGGGATAATTTAGATAAGTACTGTGCTGTGGTAAACTCTCATGGCTATGAGCTGTGCCTCAGTGATTCGGACGAGGAGATACCTGGTACGGAACCGTCATATCAATGCTTACTTTGcaacatatattttgtacgCAAACATCGACTAATACGGCACACTCTCGAGGAGCACACACAACCCACCAATACGGCGCTTCTCCAGCGTTGTAATGTTTGCCGAATTGGTTTTGTGTGCGATAAACTTCTAGAACAGCATCAGCGCACGCAGTGCCACAACAGACTAAAGCGTTATAGCTGCACCAAATGTCCGGGAAAGTTTTTTTGGCTCCAGAACCTCGAGCAGCATGCTTGTTCTTATCGCGCGTTACAGCAGGAGGATTCAGGagtggagcagcaacaacaaggaaagCAAAACAGGCATTTCCAGTGCTGTCTTTGCGATACCCAAATGAACAGTATGAAAACATTACGCGACCATTTAAACATCCATCGAGACGGACGAAGCGGAATAGACCCAGAGCAACGTGCTACTTTTTTCCGTTACTACTATCCCGATGGCCTCGCGTGTAGTTTGACTGAGCTGAGTATGCGCATTGTGAGTGATTTTGATGCAGGGGATTTCGGACGGTACTTCAATGCGTGCACAAATGACGGACAAGAGCTAGACTACTTAGACTCCGACTCCGATTCAGACTTAAGTGATGTGGAGGTGCCGTCCGCCTCAGCTACATATAATTGTGATTTGTGTGCTACTATCACAATGCGGCTTACTCAACTTCTCCAGCATCAACAAAGAGAGCACTTTGAGGAGGAAAAACTGCCTCATATCTGTATTGAATGTGGCGTGGGCTTTGTATCCATGCCGCTGCTCCAACGGCATCTTCGACGTGCCTGTGCCAAGAACCATGCGAAGTATCACTGTCAACCTTGCAATCTTCACTTTGTGTGGGAGTTTAACTTCAAGCGGCATATGCAGATGGAGCATGAGAAGGAGGAAGAAGATTCTTCCGTGCAGGCTTCCGGAACAAAAAGCCACCCAACATCTACAGGGAAGCTGCAGTGCAGCGAGTGCGACAAGATTTTTATTTGGCCAAAGGACCTGACTCGCCACAAGCGGATTCATCAGCCACATGCGGCAGCCCAATACGAATGCTCCCACTGCGAACGCAAGTTCCATCGCAAGGATGGTCTCAAGTCGCATATGCGCGTGCACGGGGAGCAGCATCTAGAGGAAATGCCCAAATCTTTGAGTCAACAACAGACGACTGTGCCAGTGGTGTTATCTCAACTGTGCGCGCCTCATGGTTGCAAGCAGATTCAGTGCATGATTTGTGCTTCACAGCACACGAAGATTTCCGATCTGCGAACACATTTGCAGACCCACCAGTTCGCTGTGGATTTTGTGGGAGAGCGTGGAAAGCCCGAAGGCATAACCAGTATTTGCCAGTCACTGTACCCAGAGCTAACCACATTACTGGATAAGCAACAATTAATTAGGCGCATCCAAAGCGATGTTGCGAAGGGCGCTGATTTAAACAGATTCATTTCCATTACCAACGAGGCAGGCATTGAACTAAGTCTTGACAGTagcgaaactgaaactgattcGGACTCAACTGAAACATTAGGGAGCAAATCTGGGCGACTGTACTCCTGCGAACTATGCCAGCTTAAGGTACCGCGCAAGCATCAACTCTATGCCCATCAGGTAGAGCAGCATGCTGGGCAGAAAGCTCCCTGCGTTTGCAGCCACTGCCAAGCTAGGTTCGTGAATGAGCAGCTGCTGGACCATCACTATCGTATTCTTTGCCGGAATGTACAGAAGACATTTCTCTGTCGCAAATGTCCACTGAGGTTTCGCTGGCGAGACAATTTGAAGCTACATGCAGGCATTGCGCATCAGGAAACAAGTGCAGAGCACTTGAGTTTGGGTACTCCACTGAGTAATGGAAGTCTGTTACCTGTTGTCAGCTACGACTGCACCGAGTGCAACCGCAGCttcaaaatgcaaaaggaTCTGACACGGCACACGATGATGCATGCCCAGGAATCAAGCATTTTTCGGTGTCGCTGGTGTGCACGTCGCTTCTACCGCTACGCCAATCTGCTGCAACATATTGAGCGTCACGGGATCACAGCCGCACAGCTGCCATATGCGGAGGCTCTACTCAACTCTAGCCGGCATCCGCATGGCCAGAAGTGCATCCAATGCAAGGTGTGTGATATAAGCTTTCCCACCATTTCTGCACTGCGGTCCCATTTGCTGTCCTCTCAAGCAGGTACACATCACGAGATGGGCTCATTGCTAAATTATTCGATTACCAATCAGCTGGGCTACGAACTGCACCTGGATGACTCTGAAACTGATGAGGAGACCAAACCGCCGGGCATGCCCACACATTACACCTGTAACATGTGCCAGCTACGTTGCGTGCGCAAGTATGAGctgcatcagcatcaacaggCTATGCATCGGCTGGAGCGCATTAGCGAGGGATGTGATCAGTGcatatataaaagtgtttCGTCGGATCTCATTGCTTTTCATCGGCGAGTGCATTGTGCCAATGTAGAGAAACAATTTAAGTGTGTTAAGTGTAGCTTCAAGTTTATGTGGGAGTCAAATCTGTTGCTCCATATGCAATTGCAGCATCCGAGCAGCGACATGCAGGAGATGATCTCTATGCCGACTCCAAATATGACCAGTTCTGAGTGCCTGATCTTTCAATGTGGCCAGTGCCCGCGTAAATATAATCGAAAGGATCGTCTAACAGCGCATGTTAAGAAGTGTCACTCACAAGACGCAGCTACCTCAACAGTTAGCCTAGAAAAACCTAAACCCTCTTCATCCCCTGGGAAACAACAAAAGAGTTTTCTCTGCGCTTTTTGCGGCAAGGCAGTGAGCTCTTCTTCCAATCTCATTATACATATACGCCGTCATACTGGCGAGAAGCCCTTCAAGTGTGACTTTTGTGATATGGCTTTTCCGCGCTCCTCCGACTTGCAGTGTCATCGACGCACTCACACTGGTGAGCGGCCACATATCTGCACCGTTTGCCAGAAGGGATTCGCGCGTTCCTACAAGTTGCAGCAGCATATGCGCATCCACAATGGAGAGCGTCCCTACAAGTGTACCTATTGTGACAAGAGCTTTACCCAGTCCAATGATCTGACCCTCCACATACGCCGGCACACCGGCGAGCGTCCTTATCACTGCAATACCTGTGGTGAGCGTTTTATTCAAGGGACAGCACTCAAAAATCATCGACTGCAGAATGGGCACTTCGAAGAGGAAAAAGCCAATGATAAAGATATCTAA
Protein Sequence: MLPTEICRTCAVQDGKMLALATRIEKYGSKSYSDVLHELTQIDPLLEENDDSLPQYLCGSCLPKLEDAYTFVLQARQVNEQMLLKLRTGLHTQCLDETPIEISMEHIKTEMDIDLSTDSNKETQNAVVLGDDDKEVSTLYVADSKWQPESDSDISHENETELKETQLRRSSRKAKLSTNNENEEPSAKENSGKRRRGRPRRLAKIESINEDGRHACKVCGKTFSWYRDMQRHARIHFEQATYECESCSKSFLRKDKYMFHLRSHEKREAKCRALQLGDEWRFAERLYSSGRLKRIECKLCGIKCQRIQELRVHVSSHVNIDTLSTLSVDSDVVREEFSSQQLNLDLTQIKQQVCTELANERDNLDKYCAVVNSHGYELCLSDSDEEIPGTEPSYQCLLCNIYFVRKHRLIRHTLEEHTQPTNTALLQRCNVCRIGFVCDKLLEQHQRTQCHNRLKRYSCTKCPGKFFWLQNLEQHACSYRALQQEDSGVEQQQQGKQNRHFQCCLCDTQMNSMKTLRDHLNIHRDGRSGIDPEQRATFFRYYYPDGLACSLTELSMRIVSDFDAGDFGRYFNACTNDGQELDYLDSDSDSDLSDVEVPSASATYNCDLCATITMRLTQLLQHQQREHFEEEKLPHICIECGVGFVSMPLLQRHLRRACAKNHAKYHCQPCNLHFVWEFNFKRHMQMEHEKEEEDSSVQASGTKSHPTSTGKLQCSECDKIFIWPKDLTRHKRIHQPHAAAQYECSHCERKFHRKDGLKSHMRVHGEQHLEEMPKSLSQQQTTVPVVLSQLCAPHGCKQIQCMICASQHTKISDLRTHLQTHQFAVDFVGERGKPEGITSICQSLYPELTTLLDKQQLIRRIQSDVAKGADLNRFISITNEAGIELSLDSSETETDSDSTETLGSKSGRLYSCELCQLKVPRKHQLYAHQVEQHAGQKAPCVCSHCQARFVNEQLLDHHYRILCRNVQKTFLCRKCPLRFRWRDNLKLHAGIAHQETSAEHLSLGTPLSNGSLLPVVSYDCTECNRSFKMQKDLTRHTMMHAQESSIFRCRWCARRFYRYANLLQHIERHGITAAQLPYAEALLNSSRHPHGQKCIQCKVCDISFPTISALRSHLLSSQAGTHHEMGSLLNYSITNQLGYELHLDDSETDEETKPPGMPTHYTCNMCQLRCVRKYELHQHQQAMHRLERISEGCDQCIYKSVSSDLIAFHRRVHCANVEKQFKCVKCSFKFMWESNLLLHMQLQHPSSDMQEMISMPTPNMTSSECLIFQCGQCPRKYNRKDRLTAHVKKCHSQDAATSTVSLEKPKPSSSPGKQQKSFLCAFCGKAVSSSSNLIIHIRRHTGEKPFKCDFCDMAFPRSSDLQCHRRTHTGERPHICTVCQKGFARSYKLQQHMRIHNGERPYKCTYCDKSFTQSNDLTLHIRRHTGERPYHCNTCGERFIQGTALKNHRLQNGHFEEEKANDKDI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -