Htri019072.1
Basic Information
- Insect
- Hirtodrosophila trivittata
- Gene Symbol
- Csrnp3
- Assembly
- GCA_035045065.1
- Location
- JAWNNK010001445.1:1720941-1723714[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.2 4.4e+03 -2.4 1.0 111 121 58 68 16 106 0.51 2 2 1.2e-96 2.7e-92 308.9 11.1 2 218 303 510 302 510 0.90
Sequence Information
- Coding Sequence
- ATGAGGAGAATGTTTCGTCCgataaaaaagattttcaCGTACATACAGAAAAATGCCAGCAACGGGACAATGTTTGGCAGCACAAATAGCCTAAATGTTGACAATGATGTGGCCgccagcagcagtaacaataGCTCCAGGCTGGATGTTAGTCTGGAGGATGAGGAGGTGGTGGATTTACAGCCACAACAGCTAGAACAGGAAAAACAGCACAAGCTGTTACAGCAGctcaatgatgatgatgatgatgatattgaGCGTCAAATAAAAACGTCAATCATTGATGCCACCAAGGTTCATGCAGCCAAGTCGAAAATTATTCTGCCACTGGAACTGCCACTGGATGATGAGCTGGCGGATTTTGCGAATGAACCAGTGGTGCTGGTaaatgacgatgacgatgagcTGGACGAACAGTTTCTGGAGCTCGATAACTTTCCCAACAATGAGATTATTGTGCTCAGCGATGGTGAACTCAATTCATCGCTGGCCTCAGACAACATATCCGAGGATCCATTGGCCATTGATGAATTTTCAACACCGCTAACACGCGACGAAGATAATGAGGACGAGGAGGATGGGGGAAACAGCGGAGATTTGCTTTGGCTGAAACTGGACACGCCAAGCTGCAGTGGCATTGGGGTCGGTGAAGCGACTCCAGCGGCTACACCAGTTAAACCGCCTACAAAGACCAAAGAGGAGGAGCTACGTAGCGATGGGGGCTCCGATTCGGGGTTGGGCAGTGAGAATGAtaggcacaacacaacaacggGGCCAACAACCACTTCGCAGAGGCCACTGCGCTCCAATTTGAAGCGGCGTCTGGAGGATGATGCCATGGAGCAGCTCGCCTTAGAGCCCGAAATGAGCGCGAGCTCCAGCTTTTGCTCCAGCACACAGAAACGCTCAAAGCGTTCCATTAACTTTGATAGCGTTAAGGTATATTATTTTCCCAGGCAGCAGGGCTTCGGCTGTGTGCCCACCGTCGGCGGCTGTACGTTGGGCATGGGAGCGAGGCACATTGCCTTTAAGACCATGACACTGGCAGAGCATGCGGCCGAGCTGCGGCGAGCGCATCGCAATCAAAACCAggatcaacagcagcaaccgccGCAGACGCGCGGCTCGAGCAGCGATGATAGCGAAGAATCTGAGGAGGATTATCTCAGTGAAGGTAGTGGCTCCGATGCCGATGATGGTTCCAATGGCTTCCTCCAACCGGTGACCCCTAAGCAGCGTCGTACGTTGCTAAAGGCCGCCGGTGTGCGCAAAATCGATGCAAACGAGAAAATCGATTGCCGAGACATACGCAACTCACGCGAGGTATGCGGCTGCTCCTGTCGTGACTTCTGCGATCCGGAAACGTGCGCCTGCAGTCAGGCCGGCATCAAGTGTCAAGTTGATCGCGCTATGTTTCCCTGCGGCTGCTCGCGCGAAGCCTGCGGCAATACCGTTGGACGCGTTGAGTTCAATCCCACCCGCGTCCGCACTCACTACATACACACGGTTATGCGTCTGGATATGGAACAACGTCAGAGCCAGGGTACTCCAACTGCCAATGGCAACACCTTGGTCTATGGTACCGGCAGCCCCACTGGCAGCAGCTCCGGCGCTGGTGTCGTCTCAaccgctgcggctgctgccgcctCGCACTGCTTTTTCATGCAGCCGCAGTCCAACTATAGCTCCGGCTATGCTTCGCCGGCATACACCCCAGAGACCAGCGTTAGCTActatcagcaacagcagacgCCACAACCGGTACCATcgccagcatcagcagcaaacGGCAACGCCGCTCTGGCCACCAGCTATGCCACCGGCTATCCACAGTTGGATAACTTGGACTCGGGTCTCTTTGCCAGCGGCAGCAATGCCACACCCTCCTATGGTGAGCTGCTGTCGCCCTCCTTTCATCAAACCCTCGCCTATGGCAGTGCCCAGCTCAACTCCTACACCGTCTACCAGCAGCCACCGCCTGGGTCTGGCGGTGGCACAACATCCCCCGGTGCGTATAGCTCGTGTGCGGTGCCATCGGTGCCACCATTTGGCATAGCCACCACAACCGCCTCCAATGCAACGCAATACCAGCACCCTAATGCGCTGGAAAGCACCGCCGTCTCGATGAATGCCAGCAGTAACTTGTCGGTAACGGCCAGCGGCTGCTCCACGGGTCTGGCACGGCTCAGTGGCAGTATCAACCCGGCTGATTTTATTAGCCTGAGCACGCCCATAAGCAGTTCATCGCGTCTTTCTCAGATCAATGATCTATTGCAGCACAATCGTAATACAACGGCCGCTTTGGTGGCCGTCTCCGAAAGCTTTGCCGCTGtacggagcagcagcaggaacagtgGTAGTAGCTGCACCACAAACACgaccaccagcaccacaacCGCTATCGATTCGATTGACACACCGCCAATTATGGAGGAAGCGCAGCGCAGCTGCATGACCTTCGAGGAGCTTCCACCGCCATTGATAAATCCCACGCCAATTGTAGCCGTAGTAGAGCAACATCATCCTCACATTGAACGCAAGCAATTGCTGGGTGTATCAACAACGCCACAGCCTCGCCAGCCGCTGGATGCCAGCGCTAGTGCCAGCGCCAACCTGGCCGAATCTTTGTCTagcagcagcaattaa
- Protein Sequence
- MRRMFRPIKKIFTYIQKNASNGTMFGSTNSLNVDNDVAASSSNNSSRLDVSLEDEEVVDLQPQQLEQEKQHKLLQQLNDDDDDDIERQIKTSIIDATKVHAAKSKIILPLELPLDDELADFANEPVVLVNDDDDELDEQFLELDNFPNNEIIVLSDGELNSSLASDNISEDPLAIDEFSTPLTRDEDNEDEEDGGNSGDLLWLKLDTPSCSGIGVGEATPAATPVKPPTKTKEEELRSDGGSDSGLGSENDRHNTTTGPTTTSQRPLRSNLKRRLEDDAMEQLALEPEMSASSSFCSSTQKRSKRSINFDSVKVYYFPRQQGFGCVPTVGGCTLGMGARHIAFKTMTLAEHAAELRRAHRNQNQDQQQQPPQTRGSSSDDSEESEEDYLSEGSGSDADDGSNGFLQPVTPKQRRTLLKAAGVRKIDANEKIDCRDIRNSREVCGCSCRDFCDPETCACSQAGIKCQVDRAMFPCGCSREACGNTVGRVEFNPTRVRTHYIHTVMRLDMEQRQSQGTPTANGNTLVYGTGSPTGSSSGAGVVSTAAAAAASHCFFMQPQSNYSSGYASPAYTPETSVSYYQQQQTPQPVPSPASAANGNAALATSYATGYPQLDNLDSGLFASGSNATPSYGELLSPSFHQTLAYGSAQLNSYTVYQQPPPGSGGGTTSPGAYSSCAVPSVPPFGIATTTASNATQYQHPNALESTAVSMNASSNLSVTASGCSTGLARLSGSINPADFISLSTPISSSSRLSQINDLLQHNRNTTAALVAVSESFAAVRSSSRNSGSSCTTNTTTSTTTAIDSIDTPPIMEEAQRSCMTFEELPPPLINPTPIVAVVEQHHPHIERKQLLGVSTTPQPRQPLDASASASANLAESLSSSSN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -