Htri018642.1
Basic Information
- Insect
- Hirtodrosophila trivittata
- Gene Symbol
- bab2
- Assembly
- GCA_035045065.1
- Location
- JAWNNK010001311.1:18805330-18807507[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.8e-10 7e-07 29.1 0.0 1 44 417 460 417 461 0.91 2 2 3.4 6.2e+03 -2.7 0.9 4 20 560 575 560 575 0.86
Sequence Information
- Coding Sequence
- ATGGGTGGCCCGCCGCCAGTGGCCAGCGGCGAAGGGCAGACTTATTGCCTGCGCTGGAACAATCACCAGACAAACCTGGTGCAGATTCTGCATGCCCTGCACGAAGTGGGCAGCTACGTGGACTGCACCCTAGTCGTAGACGATGAACAGTTCAAGGCGCATCGCGTCGTTCTGGCCGCCAATTCGCCCTACTTTCAGTCCATACTGCAGGATGTGCCGCAGGATCAGTGCAGCATCATACTGCCAGGCGTGAAGGGCTTTGAGATTGCCGCTTTGCTCCAGTACATGTACACAGGCGAGACGACAGTGACCAAGAGCCAGGAGCCAGAGATACTGCGCACAGCCAAGGAGCTCCAGGTGAAGGGTCTCTACGACAACTTGATGAAATACAATCACAAGGCGAGCACCGCTGCCGAGGAGCGTTCACAGAACCATCAGTTCCAGGGCAgcgccgctgcagcagccgcccatcatcatcatcagcaccaTTCTGCAcccacctccagctccagcagcaagCCGCTGAATGGTTCCGGCGGCGATAGTGCCTATGGCCAGCATCATCACAGCCAGCACAACTCCTCCTCAGTGATCTCAACATCCACGCATATTTCGCCCAGTGCCGCCATCTCGAGCAGCTGctcgccgccaccgccgccctTCAGTGGCTACCCGACGTCTTATCCCAACTTTCCGGCCTCCAGTGGCGTCCCCATCAACATCAATCCCCACATACCGGCTGGCGAGGCACCACTGACGCCCACACACTCGACTCCACACACTGCTGCCGGCGAGGGAGGCCAGTGGCCACTCTCTCCCTCGGCTGCCGCGGCCGCCATGCTCAATTCAGTATATGAGTCGGCGGCGGACATGAATCCACTCAAGCGCAAGAAGCTATCGGCCATCTCGAGCATGTTGCTCAACACTACACGTGACACACCAATCTTACGCAATGTGCTTGCCCAGGCGAACCCGGCGGACTCCTCCCAACCGAATCCCCTACTGCTGCCTGGCGTCAAGAACTCCACAGAGAAGACACCCACccatcagcaacagcatcagctccagcaccagcatcagcatgGCAGTGGAAGCGGCAGCGTTGCCGGCGCTGGTAGCCACAGCTTTAATGGATCCGACTATGGAGGCGACAAGGAGCCGCTGTCGCCGCATACGGATCGCTCCTTCGATGAGGAGACGGGCGGACCCGGCGGCAAGAAACCGGAATGGAAGCGTTACAAGCAATACACCCGGGCAGACATGATGTGCGCCATTCAGTGCGTCCGCGAGGGGATGAGTGCCCTCCAGGCTAGCCGCAAGTTCGGCCTGCCAAGCCGTACGCTCTATGATAAGGTGCGTAAGCTGAACATTACCACCGGACGTGGCACACATCGCACACCCAAGCGCAGTCCACCGGGCGTCGGTGTTGAATCATCGGCTGCATTCCCCTATTccgcggctgctgcagctgccgccgctgctcaCAACTACGGCCAGACTGAGTTGGAGCGCGAACCGAAGGACCATGGACACAGCCAGAACTCTGGACATGGACACCATGGCATTCCGCCAACCATTCCGCACTCGGCCGCTGCTCTGCTGGATCACGCCTTCCTGCAGCAGGCTCTGGAGAACCGTGGCGGTGACATTGCTGGCCGAGAAGCGTTGCACGCCATGGCCTTGGCAGCCGCAGCTCACGCTGCTGCCAATCGGATGTCCACTAGTCCTCCGGGATCCAATGGACACGTCGCCCGTTCGCCCGGCCACTATGCCGAGCAAGAGAGTATGGAGAAGCACGAGCACCGCATGATTAAGCGTGAGGCGATTGAGGAGGAGCGCGATGCTGATGACGAGGATGATCACGATCAGGTAGAGGATCTGTCGCTGGCACGTAAAGAACGGCCTGAGTCACCCTATTCTCCACCACCGCCACGTGCCGCCTCCCCCATGGAAAGCGCCAGCGTGATCATGCACTCCAACTCAGCATCTGCCTCCACCAATGGCAAAGAACCGCATGATGAGCACGATCGGGAGCATGAGCTCGATGACTACAACGAGGAGGCGGCATCTCCGCCGCCGCCCTCTCATCCACTGGccatgggcatgggcatggatATGGGCATGGGTCTGAAGCGCGAGCTGCTTGGCAGCGACGAGGCCCAGGCGCGCACCGACTGA
- Protein Sequence
- MGGPPPVASGEGQTYCLRWNNHQTNLVQILHALHEVGSYVDCTLVVDDEQFKAHRVVLAANSPYFQSILQDVPQDQCSIILPGVKGFEIAALLQYMYTGETTVTKSQEPEILRTAKELQVKGLYDNLMKYNHKASTAAEERSQNHQFQGSAAAAAAHHHHQHHSAPTSSSSSKPLNGSGGDSAYGQHHHSQHNSSSVISTSTHISPSAAISSSCSPPPPPFSGYPTSYPNFPASSGVPININPHIPAGEAPLTPTHSTPHTAAGEGGQWPLSPSAAAAAMLNSVYESAADMNPLKRKKLSAISSMLLNTTRDTPILRNVLAQANPADSSQPNPLLLPGVKNSTEKTPTHQQQHQLQHQHQHGSGSGSVAGAGSHSFNGSDYGGDKEPLSPHTDRSFDEETGGPGGKKPEWKRYKQYTRADMMCAIQCVREGMSALQASRKFGLPSRTLYDKVRKLNITTGRGTHRTPKRSPPGVGVESSAAFPYSAAAAAAAAAHNYGQTELEREPKDHGHSQNSGHGHHGIPPTIPHSAAALLDHAFLQQALENRGGDIAGREALHAMALAAAAHAAANRMSTSPPGSNGHVARSPGHYAEQESMEKHEHRMIKREAIEEERDADDEDDHDQVEDLSLARKERPESPYSPPPPRAASPMESASVIMHSNSASASTNGKEPHDEHDREHELDDYNEEAASPPPPSHPLAMGMGMDMGMGLKRELLGSDEAQARTD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00802934;
- 90% Identity
- iTF_00805274;
- 80% Identity
- iTF_00806052;