Htri012517.1
Basic Information
- Insect
- Hirtodrosophila trivittata
- Gene Symbol
- Mblk-1
- Assembly
- GCA_035045065.1
- Location
- JAWNNK010000871.1:1904880-1919504[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-11 2.2e-08 33.9 0.0 1 45 348 393 348 393 0.91 2 2 1.2e-18 2.2e-15 56.4 0.0 1 43 844 887 844 889 0.95
Sequence Information
- Coding Sequence
- ATGCGGCATGTCAGCCGAGCCATTGCCGAGGACCTCGACGAGGACgtggacgaggacgaggacgaggacgaaaCGAGACGAACTGCACCGAgCTTAGAACGCGTCGCTGAGGAATTCATGGGTCGTAGGAAATGGAAACATTATCAAGATCAACAGACGCGCAACCAATTGAATATCGAAGAGCAACAGCCcatagcaataacaacagaagCAGACGACTGCAACTACAAGCAGAACCACTGCAAGCCACTGAACCACCGTTTAGCGCAACCTAACGGCCAaaatttcaacaacaacaacaacaacgacgcaCTGCAATTTGAAGGAGATTTCGACAACAACCACACATCACAGGATCCCGACTCAAGTGTAACATCACATAGCTCAGAGTCACCAACACCACCGCCAGAACCCAACGATTGGATACCGTCTGATAAGTGCAATTTTTGTGTTAACGGTCGCTTGTTAACGGTGAACGCCAAAGGCGAGCTGGTGGCCGAAACAAGGGCAACTGCACCCAGCCACAGCTGCAAcaatatcagcagcagcagcatctacAACGGCTTCACTGTGCAGCAGcacgacagcgacagcaactcGAGCACATCgctgcacaacaacaacaacaagattaTTAAGAACAACCAACACAGAGCACGCAACAGCGCAAGCAACGCCGCCACAACGACGTCATCAACAACTTCAATAGAACTTTACAAGCTGCTCACGCAGCAAACAGCAGAAATGACATCAATGGAATCGATGGCCGCTAAGCTGGCCCAGTTCTCAATGATGGCCGATTTCAATCTGATGAGCACGCTGGCCAATCAACAGCATGCTAATTCGGTAACACCAACTACCTCAGAGTTatctgccgccgccgccagtCCGACACTCAAAGACACACCCAGTCCCAGTGCAGATGCGCCTCTGGATCTAAGCAGTAAGCCATCGCCGAATTCATCGATAAGCGGCGATACAAAGACAGTCAGaCTTGTGTCTGACTGTGGCACGCCGATGTCGTCAGTGCGGCGCACCTACAGCAATGAGGATCTTAACTGTGCGCTAGAGGATGTGCTGACCAACAAGCTGGGCACTCGGAAAGCAGCCAACCAGTACCATGTGCCACGCTCCACACTGCGCAACAAGCTATGCAAGATGTCGCTGGAGGCAAAGCGACCGAATGCGCAAACGCCGCCGGAGATGCAGCACTTGCGGCACGAGCTTGAACTGGAGGAGCAGGATGAGTCCGGTGAAGAGGTCGGAGATGGTGACAGCAATGCGTCAACACCAGCCCCAGGCCTGCAGGAGTTTGCTCAGCGCATTGCAGCCTCAGAGCACTTGCGCAAGATGAGCGGCATGTCCGAGCACAATGGCAGCGAACTGGGCGAGGATCCGGAACCGGATATGTCACCAAAACTGAACAGGCCACAGAGTGGCACACCCACTGGCATACAAGGCGCTGCCACAGCGGCAGCCGGAAACGCCGGTGCACTGCCCATGCCCATTGATGCGAATGTGCTGCTGCATACTCTGGTCTTGGCTGCGGGCATCGGGGTAATGCCCAAGCTGGACGAGACGCAGACCCTGGGAGACCTATTCAAATCCCTGCTGATGGCTAACAGTGGCGGCATTATGACCGAGGCACTGGCTAATAGTATGGTCGCTAGCCATGAGATGAATGGGACTGCCGCGCTACTGGATCAGAGGCtgcgccaacagcaacaacagcagcagcatcatcagcagcaacagcagcagcaccatcaacagcaacagcaacagatgAATGCTgcggcagcagttgctgccttTCGTCGTCACCTACCAAAGTCTGAAACGCCGGAGACCAACTCCTCGCTGGATACCAATGAGGCTTGCGATGGTCCTTTACTGAAGATTCCGTCCTTCAAGGTTAGCGTCTCGCCCACGCTgcactgcaacagcagcagcagcaacaacaacaattcaaacAGCAGCGCCAATCGCAACGGTAGCGGCGATCACAGTCCACACTCAGCCTCACCGATgctggcagcagctgttgccgcCGCAGCGGCCAACAGCAGCTTcaggcagagcagcagcaacagcagcagcaaccttCTATCGCCCCCGCCCACATCCATACAGAAGATGATGGCCACAACCATACAGCGCAAGATCAACGAGCAGACCAGCCAGGATAGCCTGCTGGGTCTTGATAAGcgcaacaatggcaacaccAGTGGCAGcgagtgcagcagcagcggtggagGCGGCACCAGTGGTGGCGGTGGAAAcggcaacatcagcagcagcagcagctacaagaAGCCGAGCATATCGGTGGCCAAAATCATTGGCGGCACCGATACCTCCCGTTTCGGTGCCTCGCCCAATCTGCTCGCCCAGCCGCATCACAGCCATCTGCCGCCACACCATGCccaccagcatcagcatcaacaccagcagctgAGTGCCCAGGATGCTGCCGCACTGGCAGCTGGGAAGGGCACGCGGCCAAAGCGGGGCAAGTATCGCAACTATGACAGGGACAGTCTGGTGGAGGCGGTGAAGGCGGTGCAGCGCGGCGAGATGTCTGTGCATCGAGCCGGCAGCTACTACGGGGTGCCGCACTCGACTCTGGAGTATAAGGTGAAGGAGCGGCACCTGATGCGACCTCGCAAGCGTGAGCCCAAGCCGCAACCAGATCTAGTTGGGCTGACAGGTGCTGCAAACAAAGTCAACCTGACTGCTCTCAATCACCTGGAAAAGCTGaaagccagcagcagcaacagcagcaatgccAACAGCAACTCCGGCTCCAAGCTCAGCAATGCGCTGAAGAGCAACAGCACTGCAGCTGCTTCAGTTGCGACACCTAATGGCATTTTCGATGCGGGCGCACTGCCCTTCCAGCCGAACATGTTCTGGCCACAGAGCAATGCCGGTGCCAACTATGGGCTGGACTTTAATCGCAAACCCGAATTTCTGAAGACACACCTGTCTGAGGTGATGCGCAGCAGTCCGATGGGCGTGCCACAGAATCACCATGGCCATGGCGGAGGTCACTTGAAGAGCACTCTGGAGTTTGTCGAGAACATATACGATGGCATTATTAGGAAGTCCCTCAATAATGATGGCGATCTCATGGGCGGCAGCGCCAGCGGCAAtggcagtggcaatggcaatgcgcTGCTGGATCAGCTATTGGTGAAGAAGACGCCGCTGCCATTCACCAATAATCGCAGCAATGACTATGTCGGTGCCGCCTGTTCCAGTTCCGAGGGTGTCAAGCGCACCGGCAGCCCACTGGGCGCCTATGCTGATATCAAGCGTGAACGACTTAGTCCTATGCATGGCGCCGAGAGTTCCAGCAGTGATGACGATCATGATCattccagcaacaacaacaacaataacaacaacagcgacctggcgcacaacaagaacaacaacggcagcaccaatagcaacagcaacaccaacaacaacggcaatgGACGCAGCCGCATGACATCGAGGGACTCGGAAACGGATGCCAGCAGCCTCAAGAGCGAGCAATCACACAACTCGGCAcaacttggcaacagaatGATGGATCTCAATGGCAGCAACAGTGTCAAATTCGAGTCGGAGCCACCAACTCACGTATCGCCCAGTAACTCGATCCTGCACGAGAAACTGGCACAGATTAAAGCCGAACACGCCGAATGCGCCGCCGCCGAGGAGCAGTTATAG
- Protein Sequence
- MRHVSRAIAEDLDEDVDEDEDEDETRRTAPSLERVAEEFMGRRKWKHYQDQQTRNQLNIEEQQPIAITTEADDCNYKQNHCKPLNHRLAQPNGQNFNNNNNNDALQFEGDFDNNHTSQDPDSSVTSHSSESPTPPPEPNDWIPSDKCNFCVNGRLLTVNAKGELVAETRATAPSHSCNNISSSSIYNGFTVQQHDSDSNSSTSLHNNNNKIIKNNQHRARNSASNAATTTSSTTSIELYKLLTQQTAEMTSMESMAAKLAQFSMMADFNLMSTLANQQHANSVTPTTSELSAAAASPTLKDTPSPSADAPLDLSSKPSPNSSISGDTKTVRLVSDCGTPMSSVRRTYSNEDLNCALEDVLTNKLGTRKAANQYHVPRSTLRNKLCKMSLEAKRPNAQTPPEMQHLRHELELEEQDESGEEVGDGDSNASTPAPGLQEFAQRIAASEHLRKMSGMSEHNGSELGEDPEPDMSPKLNRPQSGTPTGIQGAATAAAGNAGALPMPIDANVLLHTLVLAAGIGVMPKLDETQTLGDLFKSLLMANSGGIMTEALANSMVASHEMNGTAALLDQRLRQQQQQQQHHQQQQQQHHQQQQQQMNAAAAVAAFRRHLPKSETPETNSSLDTNEACDGPLLKIPSFKVSVSPTLHCNSSSSNNNNSNSSANRNGSGDHSPHSASPMLAAAVAAAAANSSFRQSSSNSSSNLLSPPPTSIQKMMATTIQRKINEQTSQDSLLGLDKRNNGNTSGSECSSSGGGGTSGGGGNGNISSSSSYKKPSISVAKIIGGTDTSRFGASPNLLAQPHHSHLPPHHAHQHQHQHQQLSAQDAAALAAGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDLVGLTGAANKVNLTALNHLEKLKASSSNSSNANSNSGSKLSNALKSNSTAAASVATPNGIFDAGALPFQPNMFWPQSNAGANYGLDFNRKPEFLKTHLSEVMRSSPMGVPQNHHGHGGGHLKSTLEFVENIYDGIIRKSLNNDGDLMGGSASGNGSGNGNALLDQLLVKKTPLPFTNNRSNDYVGAACSSSEGVKRTGSPLGAYADIKRERLSPMHGAESSSSDDDHDHSSNNNNNNNNSDLAHNKNNNGSTNSNSNTNNNGNGRSRMTSRDSETDASSLKSEQSHNSAQLGNRMMDLNGSNSVKFESEPPTHVSPSNSILHEKLAQIKAEHAECAAAEEQL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01570163;
- 90% Identity
- -
- 80% Identity
- -