Basic Information

Gene Symbol
hang_1
Assembly
GCA_037075165.1
Location
JBAMCL010000234.1:1677393-1700289[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 0.45 30 5.6 1.0 3 23 533 554 532 554 0.93
2 18 0.57 38 5.2 3.2 3 22 661 680 659 680 0.89
3 18 0.00096 0.064 14.0 3.3 1 22 789 810 789 812 0.90
4 18 0.11 7.4 7.5 0.1 2 21 824 843 823 844 0.93
5 18 0.0011 0.075 13.8 0.2 2 23 975 997 974 997 0.95
6 18 0.0032 0.21 12.3 0.1 1 23 1005 1028 1005 1028 0.96
7 18 2.6e-05 0.0017 18.9 0.1 2 23 1114 1135 1113 1135 0.97
8 18 0.00046 0.031 15.0 2.9 2 23 1262 1284 1261 1284 0.97
9 18 0.036 2.4 9.0 0.2 2 23 1293 1315 1292 1315 0.95
10 18 0.0022 0.14 12.8 0.3 1 23 1328 1351 1328 1351 0.97
11 18 0.0002 0.013 16.1 1.1 1 23 1390 1412 1390 1412 0.99
12 18 0.0031 0.21 12.4 0.9 1 23 1420 1443 1420 1443 0.96
13 18 0.098 6.5 7.6 0.5 2 20 1451 1469 1451 1469 0.95
14 18 0.00048 0.032 14.9 0.2 3 23 1570 1590 1569 1590 0.98
15 18 0.0081 0.54 11.1 0.1 1 23 1625 1647 1625 1647 0.97
16 18 0.00095 0.064 14.0 0.6 2 23 1739 1761 1738 1761 0.93
17 18 0.01 0.69 10.7 0.3 3 23 1817 1837 1817 1837 0.98
18 18 0.00011 0.0072 16.9 2.1 1 23 2285 2307 2285 2307 0.99

Sequence Information

Coding Sequence
ATGTGCGACACtgccgcaacaacaatagcagcaataGGTGGTGcgggagctggagctggagctggagcgggAGCAAGTGATACAGCGTTAGCAATGGATGAGCAAAATCAGCGTATGCGACAAAGCTGCTGTCGCTTATGCATTGCACCCGCCAGCGAATGTATTTCGATTATTAACAGTTATGCGGCCGATAAGGAGCCGCTGGCCACTAAAATACATAACTGCGTAAATATCAAGATAACGTCCTTGGATCGTCTATCGCTGCATATTTGCCACGCCTGCATCAGCTATTTGAACTCTTGGCAGAGCTTCAAGAATCGCTGCCTCAGCTCCCAGTCGAAGCAGCGGCAATGGCTGGACGCTGACAAAACCAAGCAGCAGGCGCTCTTGGACTATTTGGATTTGAACCGGGCCGAGAATGGCAGCGCCGTtgaccagcaccagcagcagcagcaacaacaacagcagcaacatcagcagcagctgcagtccGAGCTGAAAATGGATGCGGCGACGACTGCAGCTGAAAAGGCGTCGGCCAACATATTGGATGGCATACCCTCGCTGAAGAAACGCAAATCGTTAACAGTCTATGTGAGTCCaaagcaacagctacaacagctgcaacaacagcaacaacaacagcaacaacagcaacaacaacagcaacaacagcagcaatcgcAATCAGCAAGAACGACAAGCGCGGCGGCTGAGCCACAGCAAACATTGCAGACCCTTTTATTGCAGGTGCCCCCAACGGCATTGGCAACGGGCTcagcacagcaacagcagcagcagcgcaaatATCACCACCAGcatcagcaccagcagcaacagcaacaacaacagcaacgtggcaagcagcaacatcatcatcatcaatactatcaacagcagcgacagcgacgcatACGTCAGCCGCGACGTCAGCCACTGGCAACTGGCCTACAGCGTTTGCCCAAATTTAAgccaaaattgtatttgccaCTGGACATTTCAGTGCCAccgctgccaccgctgccaccgctgccaccgctgccAACGCTGCCAACTGTTGCTGccggcgctgctgttgctgaagCAGCGCCGTTGCCACTGCCGTTGTCGATGCCGTTTGATTTCAGCCACAATTTGAATCTCAATCTAAATCAGAATTTAAATCTGAGTCATAGCAGACACAGCAGCGTTTTACCGACGCCGCCggtgccgccgccgcctccaGTTGCAACAATAACCAGTAGCGCCGCGGCCGCAGCGGCTGCCGCAGCATctgacgctgccgctgctgctgctgccactgccacagtgACAACGCCTCTGCTTATGCCGCCGCTGCCGGCTATGCCCATCAAGGATGAGCCCCTGGACGACACGGATGATGACTTTCAAATGAAGTGCATTGACGAGTCCGATGATATGATGGATCCCACAATGTTCCTAGAACGCTCCGAGCACGAGGGCGATGTGCCACTAATGACCTCCGAATATGATTACACGGCGCAGCATGGCGTGACGGCGGCCGTGGCAGCGGCATCGCTGCCCGCAACCGCGGTCGCAAATGTGGCAGCCGCTGGCGACTCCAAGGTGGCCAGCTGCCGTGCCTGCAGTCTGCAGTTCTCGACGCGGGCCAATGCGCGACGCCACGAGCGCAATCTGCATCCGAATCTGTTTCAGCTGTCGACAGACTCACCCAATAATACGCCCATTACAAAGCCAACGCCGGCATTGGCCGCCGCACTGGAGATTCAGcgtgcagcagccgccgcagcggCCACAGCGGAGGCAACCAAAGCCGCTGCCGGTGGCAACATATCGGCACAAAAGTATCGCCAGGTTGTCATGAATACGTTCATCAAGTGCGAGAACGGTGGCTTTGACTACGACAATCCAGAGCAATATCAGCAGCTGTTGACGCGCGACAAGGTCGAGTTCATCCAGGAGAATAATGAGTTTCTCGAGCAGTACCAGACGATGACATGCCGctgttgcaacaaatattttagcaCCTACAAGAACTTTATGGCGCATGTACGCAAAAAGTATCCGCTGCTGCCGCGTAATTTGTGCTTCAATTGCCTCAAAATGAACGATTCCAAGGCGCTGTTTATATCGCATCTGAAGAAGCGCAACTGCATCAATTTGTATCGCATGCTCAATGCACTGCGCCTAAGGCAGCCAAACTTTACGCATGCTGGCAGTGGCGGTGCTGCCACAACAGCTGATATCTGCGGCGggcagctgcaactgttgtCGGCGGCAgcggtagcagcagcagcggcagcagcagcgtcagccgCACATGAAACGTCAACGGAACGGCCAGAGAAGTTGCGCGCAAAGGAGCTGCTGGTGAATAAGCTATATGAGTGCAAGCTCTGCCCAAAAGGATTTCGCACCAAGCACGAGTTTCGCACCCATGTGTATGACAAGCATGCGGATGTGCAGCGCAAGGATAACAATTCGATACAGTGCAGCTTTTGTGGATTGGACTTTGCCGATCCGGTGGATCGGCGTCGCCACTACAACAACATGGACTGCATTGTCCGGCTGCGCTGCATGACCTGCGATGCCAAACTGGAGACGCATCAGCGTTTTCTCGATCATGTTTATCAGGATCATTTGGGTGGCGTGAGCAGCGATAATGCCTCCACGGCCAACAGCGGCATGGAGCATTCCCCCGGCAAGCGTAGCCTATTGGGCGCCTTGGGAATTGGTGTTAGTCAATCGTCCAATGATGAGtcacgcagcagcagcaacaataataacaacaatgccacAATTACACCAATTACCTCCACACCCAAATTGACAACATCATCGACGGCTGGTGGAGCTGGCGGAGCAGCTGCAACCAGCGGCAGCTCCACATCTGGCAGCCGCGATGCGCCCAAATCTCAGTATTTTTCGCGCATGCCCCAGGTATGCCCCATATGTGGCCAGCAGtataacaactacaacaacgtGCTGCGCCACATGGAATCCAAACATCCCAATAAACTGCCCGAAACCTATAAATGCGTACGCTGCGGCCTTGGCTATCCCCGCATCTCATATCTGCGCGAGCACATGATCAATATCCATGGCGTGGACAAGAATCGACATTCGGGGGGATTTGAGTATATTGTGAATGCGGATGCGGTTAAGCTGGCGGATGGCAGCACACCCAATGTCTATACAGGACGCTACGATTATGTGATGAAGGATTTAATGTCCATAACAAATGGTGGGACACTCGACGACGAGGAGGAGGAAGGCGGCAGCGTCGCCAAAAAGATGAGGCTCGAtgatagcagcaacaacagcagcattaACACCAGCATTGCCAATCAGCAAAAGGAATGCCCCATCTGCAATGCGGTGTTCAGCAACAACATTGGCTTGTCCAATCACATGCGTTCGCATTATACCGCCTCGACAGCGACAAATGCAGCATTGGCGGCTGCCAATCGCATGACGCCCAAATCACTAACCATAACTGCAACGCCGCCGCTGGAGGCGGCTGTCACAACGTCCACAAGcagtgcagctgcagctgcagcagcaacagccacatcagcagcaacatcaacggcgacagcagcaaacacagcagcagccgcagcagcagcgacagcaacaacggcagtagctgctactgctactactgTTGCCGTTGCAACATCAAAAGTGGCCCCAACTGGGGGCAGCTTACCACCCGCAATGGTCCATCAAACGCCACAGGAGCAGGCCGTATTCCGGCGTAGCTTGGATCAGGCCGCCGATCGCCGCTTTCGGCGCATGCGTTGTCGCATCTGTCAGCGGCGTTTCAGCTCAAAGAAATCATACCGTTACCATATGCTAACCGATCATCAGGTGCAGAATGTGCAGTTCATCAAGTGCAAGCTATGCAATGCCGAGTTTGCCTACGAGAAGGGCCTCAAGGTGCATCTGTTCAAGGTGCATGGGCGTGCCATCAAGGACGAAATGATTGTCAAACAATTCGAATGCGATGTCTGCTCTACCGTGTACAGCTCTGAGCTGGAATTGCAACAGCATAAGCGCAGTGTTCATAAATCTCAACTTGGCAGCGCCAATTCGCTCAAATCATCGAAAACCGCTACAGCTACCTCTGCTGATCTGGCCGATACATCCGgtacggcagcagcagccctaCCGCTCTACTGGTACCAGTGCAAGTACTGTCCATCCAATTTTAATACTAACAAAAAACTGGCCATACACATCAACTCGCACGATGAGTTCGACTCGAATGATTATTCGTGCAAGGACTGCGGCAATGTGTATAGCGGCCGGAAGAGCCTTTGGGTGCATCGCTATAAGAAGCATCCGCAGGTGCCGGATCCCGCTGAGTGCACGCTGTGCCGCAAGATGTTCTTTGATCGGCAAATGCTGGAGAATCACAGGCCCACCTGCAATCGTAAGCCTATCACTGCCACCGGCGCCCATCAGCAGGATCAgcaggtgcagcagcagcagcatcgtcGCGGCATATTCAAGCACAAAACtggcgatgacgatgacgaggaggaggatgatgatcagctgctgctgctggacgatggcggcggcggcggaggtggtggtggtggcagtgGCGGTGGTGCCACCGATAGCAATGGAGGCAATGCAGCGACGAGCAATACAAACCCAAACACAAACACCATCAGCACAAGCACATTGAAGATACGCATACCGGAGGTGGCATGCACCATATGCGGTGCCCGCTTCACCGACCAGGAGATGTTCGGCAAGCACATACAGAAGCACGAACAGGAGCTGTATGTGGACAACCCATTGGCAGCGATGTTCGATGATGGCCCAGCGGATGCTGGCCAGTTTCAGGTGGAGCGTCAGAATGAGAATGGCGAATATGCGTGCGATTTATGCGCGAAGACGTTCCCCCAGGTGATTGCACTCAAGGTGCATCGCAAGTGGCATTTCAGAGGTGATAGCAAGCAGAATCCCATCATCGACAGCGAAGCGACAACgttgaacagcagcagcaacaacaacaacaacaattcgctGAGCAACTCATCGATGCTGCATCTGCGCGAACTGCATGCGGTCGGCCTGATGCCCAACCAGCAACAtcagaagcaacaacagcagcagcagcaacaacaacaacagcagcagcagcaacaatccCGGAACAACTCATCGACCAGCTCGTCGAGAAGCAAGTCGATGAAGCGGAAACGTGAACTTAAATGCGAATACTGCGCCTCCACATtcattagcaacaacaacctgCGTCGTCACATGTACGAGCTGCACAAACATGAGGTTAGCAACCTGCCGGAGCCGCCGGTGATTGAGGTGGATGAGGCGCTCACCTGTCGCCGCTGCGGCGATCTACAGTTTGAGACAAAGGAGCTGTGGATTGAGCATAAGTTGGCCGACGCCAAGGTGGTGCGTCCGTTCTGTCCATTCCAATGGGGCTGTGATCTCTGCGGCGAGTATTTGTCCCGCAAGGAGAAGCTCATCAATCACATCAACAATCATCTCAAGGAGGATGTGATTGTTCCGGTCGCGGtggccacagcagcaacaacaacaacaaagccaacaacGTTGCCAAACCCAGAGGTGAGCAATAAAAATGCGGCAACAACgaaggcaacaacagcgaaggcagcaacaacagctaaaCAGTTAAAGGCCAAGGAGAATGCGCATGCGGCAgaggtgcagcagcagcagcagggggAGGAGGAGGTTGATGGTGAGGCAAAGTTAGCGAAGCGGCAGCCAAATGATAATGTGGAGCaagataatgataatgataatgatgaggATGATAGTGATATGGATGATGATAGTGAcagtgatgatgatgacagcACAAgcgctgatgatgatgatgacgacgacgatgacgatgatgatgacgacgacgacgatgatgatgacgatgcgGAGGAAGATGAAGATGTTGTGGAACAGCAGctgcggcaacagcaacaacaacagcaacagcaggaacAACAAAATACCAACAGCAATGCAATTGAgaacgacgatgatgatgatctaATTGAAGAGGTTATCGAAGATGATGGCATTGTCGAGGAGCTGGAcgatgatgaagatgatgacgatgatgatgaggatgatgtTGATGCCGGCAACACCTCCGATGAGCAGCGACAGCCAACAACGACAGCtaacagcagcatcaacaacaacaacaacaatagcaagcagcagcaacagcagcccacGCGCCTAAACTTTGAGTATACGGACGCGGAGAGCGCCAAGCTGAATGggaatggcaacaacaagccaCAACAGTCGAAGGCGAAGGGGCGGCAAGCGCAGGTGCTGGTCATGCATAGCTCTggggaggaggaggaggaggatgaggaGTTGGAGGaggatgttgatgatgatgtcgAGGATGATGATGTCGAGGATGATGAGGAGGATATTGAGGTTGAGGAGGGCGTGGGTGAAACAATGACCATCGATGATATTATTGAAGAAGATGATGgtgaggatgatgatgatgatgatgtggttggtgttggtgttggcagTGGTGTTGTTgaggatgatgacgatgatgatgatgataatgatgttgaCGATGATgttgacgatgatgatgatgatgttgacgATGGCattgatgacgacgacgatgatgatgatgatgacgccAATAACATGGGCAATGGTCGCAATCGCATTGCCAATGTTGCCGACGGCGGTCGCATTGATACGTCATCATCCGAGAGcgagtcaacaacaacaacatcgcaTTCAACGGGTGAGCGGCGTAAAAAATCAGTAGTTAAATCAGCGGCAGATGGCGCTGCCGCTGATCAGTCTAATTCCAGCTATACGTGTGATCTATGTCAACTTTGTTTCGATTCTCAGGAGCTACTGCAGACACACATAAAAAGCCATTTTCTTAACGGCCCAACGGCGGGGGGCACTaccggcggcggcggcaccGGCggtgccagcagcaacagtaacagcaatagcaagcgcagtcgcagcagcagcagtcgaaGTCGTAGCGGCAGCAGTAGgggcaaccacaacaacaataacaacagcagcaaaagcaataCCAAAAAGTCCAGCCTGGATGCAAAAAGTGgcactgcaacaacaacaacgaaagcgacggcgacgtcgacagcagcagcagcagcagcaacagacgcTGCGACGGGCTAA
Protein Sequence
MCDTAATTIAAIGGAGAGAGAGAGASDTALAMDEQNQRMRQSCCRLCIAPASECISIINSYAADKEPLATKIHNCVNIKITSLDRLSLHICHACISYLNSWQSFKNRCLSSQSKQRQWLDADKTKQQALLDYLDLNRAENGSAVDQHQQQQQQQQQQHQQQLQSELKMDAATTAAEKASANILDGIPSLKKRKSLTVYVSPKQQLQQLQQQQQQQQQQQQQQQQQQQSQSARTTSAAAEPQQTLQTLLLQVPPTALATGSAQQQQQQRKYHHQHQHQQQQQQQQQRGKQQHHHHQYYQQQRQRRIRQPRRQPLATGLQRLPKFKPKLYLPLDISVPPLPPLPPLPPLPTLPTVAAGAAVAEAAPLPLPLSMPFDFSHNLNLNLNQNLNLSHSRHSSVLPTPPVPPPPPVATITSSAAAAAAAAASDAAAAAAATATVTTPLLMPPLPAMPIKDEPLDDTDDDFQMKCIDESDDMMDPTMFLERSEHEGDVPLMTSEYDYTAQHGVTAAVAAASLPATAVANVAAAGDSKVASCRACSLQFSTRANARRHERNLHPNLFQLSTDSPNNTPITKPTPALAAALEIQRAAAAAAATAEATKAAAGGNISAQKYRQVVMNTFIKCENGGFDYDNPEQYQQLLTRDKVEFIQENNEFLEQYQTMTCRCCNKYFSTYKNFMAHVRKKYPLLPRNLCFNCLKMNDSKALFISHLKKRNCINLYRMLNALRLRQPNFTHAGSGGAATTADICGGQLQLLSAAAVAAAAAAAASAAHETSTERPEKLRAKELLVNKLYECKLCPKGFRTKHEFRTHVYDKHADVQRKDNNSIQCSFCGLDFADPVDRRRHYNNMDCIVRLRCMTCDAKLETHQRFLDHVYQDHLGGVSSDNASTANSGMEHSPGKRSLLGALGIGVSQSSNDESRSSSNNNNNNATITPITSTPKLTTSSTAGGAGGAAATSGSSTSGSRDAPKSQYFSRMPQVCPICGQQYNNYNNVLRHMESKHPNKLPETYKCVRCGLGYPRISYLREHMINIHGVDKNRHSGGFEYIVNADAVKLADGSTPNVYTGRYDYVMKDLMSITNGGTLDDEEEEGGSVAKKMRLDDSSNNSSINTSIANQQKECPICNAVFSNNIGLSNHMRSHYTASTATNAALAAANRMTPKSLTITATPPLEAAVTTSTSSAAAAAAATATSAATSTATAANTAAAAAAATATTAVAATATTVAVATSKVAPTGGSLPPAMVHQTPQEQAVFRRSLDQAADRRFRRMRCRICQRRFSSKKSYRYHMLTDHQVQNVQFIKCKLCNAEFAYEKGLKVHLFKVHGRAIKDEMIVKQFECDVCSTVYSSELELQQHKRSVHKSQLGSANSLKSSKTATATSADLADTSGTAAAALPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQVPDPAECTLCRKMFFDRQMLENHRPTCNRKPITATGAHQQDQQVQQQQHRRGIFKHKTGDDDDEEEDDDQLLLLDDGGGGGGGGGGSGGGATDSNGGNAATSNTNPNTNTISTSTLKIRIPEVACTICGARFTDQEMFGKHIQKHEQELYVDNPLAAMFDDGPADAGQFQVERQNENGEYACDLCAKTFPQVIALKVHRKWHFRGDSKQNPIIDSEATTLNSSSNNNNNNSLSNSSMLHLRELHAVGLMPNQQHQKQQQQQQQQQQQQQQQQSRNNSSTSSSRSKSMKRKRELKCEYCASTFISNNNLRRHMYELHKHEVSNLPEPPVIEVDEALTCRRCGDLQFETKELWIEHKLADAKVVRPFCPFQWGCDLCGEYLSRKEKLINHINNHLKEDVIVPVAVATAATTTTKPTTLPNPEVSNKNAATTKATTAKAATTAKQLKAKENAHAAEVQQQQQGEEEVDGEAKLAKRQPNDNVEQDNDNDNDEDDSDMDDDSDSDDDDSTSADDDDDDDDDDDDDDDDDDDDDAEEDEDVVEQQLRQQQQQQQQQEQQNTNSNAIENDDDDDLIEEVIEDDGIVEELDDDEDDDDDDEDDVDAGNTSDEQRQPTTTANSSINNNNNNSKQQQQQPTRLNFEYTDAESAKLNGNGNNKPQQSKAKGRQAQVLVMHSSGEEEEEDEELEEDVDDDVEDDDVEDDEEDIEVEEGVGETMTIDDIIEEDDGEDDDDDDVVGVGVGSGVVEDDDDDDDDNDVDDDVDDDDDDVDDGIDDDDDDDDDDANNMGNGRNRIANVADGGRIDTSSSESESTTTTSHSTGERRKKSVVKSAADGAAADQSNSSYTCDLCQLCFDSQELLQTHIKSHFLNGPTAGGTTGGGGTGGASSNSNSNSKRSRSSSSRSRSGSSRGNHNNNNNSSKSNTKKSSLDAKSGTATTTTKATATSTAAAAAATDAATG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00803763;
90% Identity
-
80% Identity
-