Basic Information

Insect: Hirtodrosophila histrioides
Gene Symbol: JARID2
Assembly: GCA_037075165.1
Location: JBAMCL010000225.1:152496-160523[+]

Transcription Factor Domain

TF Family: ARID
Domain: ARID domain
PFAM: PF01388
TF Group: Helix-turn-helix
Description: This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 7.4e-22 1.6e-18 67.1 0.0 6 89 1871 1952 1866 1952 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	7.4e-22	1.6e-18	67.1	0.0	6	89	1871	1952	1866	1952	0.92

Sequence Information

Coding Sequence: atggTTGTCTCAAAAGACAACAAGCGCCGTCGTAAGGAAACGGAGACACCGCCAACGTCAtcgtcagcagcagctgcggcggcggcggcggtatCTGTGGCCGTGGAGTCATCACCCGAGATGCCTAAAAGAACGAAGGTGCAAGCGCAGCGTAAATTCGCCCAAGGCCAAAGCGCGCCTAGCTCAGCGAACGCATAcagcgctgccagcgtcgcagcagcagctgcagcagcggcggcggcggcagcagcatcatctgGCCCGAGCACATCGAGCGAGAGTCTTCAACCGCCCATTGAGATACTACCCAACAAGTGTCCCGCACCGCAGGATTTCTTAACGTTTCTCTGCTTTCGCGGCACATCCGCACTGCCCGCCCACTTGGACTATCTGAATCAGGGCAAGTCCAAGGCAAATGAGTCGCTGCcgccgagcagcagcagcgataacaacaacaagaagaaaaacaacagcagcagcagcaaaaagaaacGCGGCAGACCCgccaaagcagcaacaactggcaAAGTAGCagacgagcagcagcaacgacagTTGCCAGCAGCAGATAAAGTTGAAGCGGCTGCGCCACCGCCGCCCACTGTGCTTCTAGCGGGCGCAGTGCGCAAACGCGCCGAGGTGATAACTGAGGGCAATAGAAGAGGCGCGCGACGCGGAGAGGCACTGAAACGTCGCTCGAATCGTGGCGGCAACAAGGAGAAGGATGACGACCAACAGCAGCTGGATAATAAAGCTGAAGCTGAGCAGCAGGAAGAGGATGAGgaggatgacgatgatgaaTTCTTTTCAGCGCACGATGCCAGCTCGCGTAATGGCGGTGCTGATGAGACACTCTCCAAGTTGGAGTCAGCACAGCCGAGTGTGAAACGTGGTCGTAATCAGGCGGCCAGGAAAGCAGCTGTGGCTGTCTCACCAGCCGCAACAGAAAGCAGTGCCACCAAGGAGAAGGAAAAGGAGAAGGAGAAAGAAAAGGGGCCTGTAAAGCGGGTGCGTCAACGTGAATCGCccatttttataccctcgcCAGAATCCTCGGGGCGTATGACGCGACAGCGAGCTTTTTTTGAGCCCGTCAAGGTGGCGCCAAAGCCGGAGGAGGAGAAGGAGAAAGAGGAGGATGAGCTGCCagtagcagcggcagcagagcCCAAGAAAGCTAAAGACGCaggcaatagcaacagcaataacaataagcagcagcaacagctgctcaCCAAGGAGAAGACAAACTCTAGCATTTATGCCAAAGATGCTgccaagcagcagctggagaatGGCGCGACAGCaacggctgcagctgctgctgaacaACAGAAGGGTCTCAATGTATTCGACTTTAGCTCCGATGATGAACAACCGCTGGCCAAAGCCATCAAGCTGAAAAAGGGGGTTAAAAAgggtgcaacagcagcagctacagcagcaacaacaacaacagtcaacGCACGTGGGCGTAAATCAGCTGGCGGCGCTGCtaagaaacagcagcagcaacagcgggagcgggagcctGAGGAGGAGAAAGTTGAGGCAAGGCCCGCAACGCCGCCAAGCAAGCCCGAGGAACCGCAGCCCAAAACCAAACGCGGCAAAGCGCTTAAAAAAAAAGCCGAGCAAGAAATTGCAGACAATCAACTACTGAAAGAGCAGCTTGCGCCGCCGTCGCCCAAAAAGCCGACccacagcatcagcaacaacgcGCGTCCAGTACGACGTCAGGCCCAAGCCAAGGCCAACAAATCGCAGATGCAGCTGGAAAGCGAACGTTCGGCCAGCCCCAGTCCCACGCCCAATCCCAATAACCAGCGCAGTCAGCGACCCTCGCGTAAGACGAAGGAAGCGGCTGCCATTTATATGGGCATCATTGGGCACAAGCTGCAGCTGGCCGATGATGAGGAGGATGATCTCTCGCTGAGCAGCTTTCCGGACATACCCAATGTTAAGCAAATGGAGAAAATGGAAAAGGAAATGAAGAAAAATGCGACGGGCAAGAGCCAGCAGACAGAAACGGCAGGAGGAGCGAGAAAAAAGTCACCTAGACcagcggcagcgactgcgGCGGCAAcagacacagcagcagcaacagttacaccagcagcagcagcaacagatgCTGTTGCGGCAGAGCAGTCCTCGCCAGAAACGTCAGCGCCGCCGCCGAGACGCGGGAGGCCGCCCAAGCAGACAAAAGCGagcgccacagcagcagcagcagcaacaacaagcaagcCACAGATTGAGGGCATGCTGGTTAAAAAAGGCGCATTGGCGCTTGCCAAAGCCAAGTccgaacagcaacaaaagcaacaacaacaacaacaacaaaaagttgacTCCGATGCGGAGGaagattttttaattaacgAGGAGCTAAACGAAACGAAGCGCAAGCTGGAAAAGAGTTTTAGCGACTCGGATGATGAGCCGCTGGCCATTAAAGTGCCAACGGCGgcagcgtcaacagcagcggcagcagctgccgctgcaacatcaacaacaacaacagccaaagccggcagcagcagcaaaacgGAAGgtggaacaacaacaacaaaagcagcaactaCCGCGGCACAGGAGCCAAGCaaaacagcagctgccacagccgcaacaactacaacagcagcgtctgcagcagcaaacacaacaacaaccacaacaaccagTTTGAACTGCACGCCGCCcaagccgctgccgctgccgctacCAATGCCAACAACACAGTTAACAATGTTGCCGCTTACAGCAAAGCCAACACCGTTCTCCATATCACCGCCTAGCTATGCGCCAGCGGCGGCAGCCGCATTGAAAGCAATGGAAAAGAAATCGCCGGTGCCGACATCAAAGATTCTCAATGTGCCTGCCACATATGCGCTGCCTGGCTCTGGCGTGGGCGTGACAACGGCAACAGTTGGCTTTGGCAAGACCACATCGTATTTGCCGCAAGCATCGCCGCATTATCACACGCCGTATGTGCGGCCAGCAACATTTGGTGTTGCGGGCAGCAAGACGCCGCAGCATCCGCAacaggcaacggcaacaatatCGGCGGCAGCTATAGTTACGTCGCCTTTGAAGTATCAAACGCCGCCCACAACTTATCCGCCGCCCATTGAGGCGTATCAGTGTCCCAAAATCAATCCTAATTTTTTAACGCCCAAATATGAGCGCAGCAGCGTGTTGCCgcgcgccaacaacaacaataacaacaccaccatcagcagcaacagcaccacaAGCAATACCAATAACTTTACAGCGCCAACACCAACGCGTACCACGCTCAGCACGCTGACCACGCCCGTTGCCGGCAGCGCAGCCACGGCCAAAGCTGCACTGGCGGCGCCTGCAGTCGCCCAATGTCAAAGTCTCAATCTAAGTCTGACTGTAACGCCACCAGCTGTGGCCTCCACATCcgcggcagcggctgcagcagcacaacagcaaccacagccgcagccacagccacagttGTCAGCAGCACCCGCTGCTACAGCGgcgcctgctgctgcaagTAATAGCAACGCTGCAGCTGATCCGCTTAAGGATGAAATTGGCAGCATTTTGGCCCAAGCCACGCTCATGCCCAGCAAGGAGGAATCAGGCAAAATCTTTGGCATTGCCAGCGTTAGTTTGGCGCAAAGTTCCGGCCCGGATAACACGAAATGCACGCTGGGTAAATGCGGTTCCATACACAAGCCCGTGCTGGGTCCTGTGGTACCCACGGAGAGCTACTTTGGGGATCAGCTGACCAGCAAGGAGCGGCGCAAGGCCAAGGTCAATATGACGCATGAGCAGATACAAAAGTGGCTTATCGAATGCAGCTCGAATCCGGATGAAATCCAAGATGATCTcgatgatgattatgatgacaGCATGCGGCCACAACAAGCCCAAACGCCGCCCGGACCCGCGCGTGATGACAAGGAGAGCACCAGCTTCAGCAGCTCCTCAAAGAATACGCGCGGCGAGCTGGGCAAAAGTGAGAGCGCCTGGTCGGCCAAAGGACCTTCGCTAAAGGCCACACCGGTGCTGGTCAgctcagcagcggcagcagccgccAATCGCAAGGAGACAGATACGGAGCCGGATTTGGACTTTGATAAGTGTGTTACGCCTGTGAATCTCACGCAAAAATCACAGCTAGAGGCAACTGCTAGCGATAGGAAGCTGGTTGAGAAGAAgcttaaaaacacaaatagcCTCAAGCAATCAGCGATgtctgctgcagcagcagcgtctggCAGCAAGCgtggggctgctgctgcggccagCTCAACGCCACTGCCGCCGAGCAAGCAGAAGGCAGGCAACAAGAGAAACGCAGCTGCAACAAAGCTGTCGACGCCGccacccagcagcagcagcaatacgCCCGCCTCccaaactacaacaacaggagccacagcaacaacatcaataggAACAGGAACTGGAACATCGCCAGCCAAGCGCACGCCTGTCTACCACAGTCTGAGCAAAGTCAAAGCACAGACGCAGCTggacaacaagcagcaacagcaacaaccacagcagAATGCAACCAAGTCGGGAACAACTTCGGTTTATGCTTTTGGCAAGGAGGAGGAGACAACACCGGcacctgttgctgctgctagcAAAGTGACAAATCGTCGTCGCAATGCTGACAACGATTTATCAGCGCCGCCGCCAGCGCTTAGCGAGCGTTCGCCAACCAAGAAGCGTGCTGCggctgccgcagcagcaactgcgGTGCAACTGACGCTCAGTCCCACAGATAAGCTGGAGAAGCCCAAGGCGACGGCTTCGGCGCGCAATGCgaagaaacagcagcaacagaaacaggcggcagcagcagcaggcgctgATTCGGATGCAGAGGGCGCCACGTTCTATATACCACTGCGGCAGGGCGCCAGTGGCGGTGGCGATGGTGGCATACAGGGTGTGGCCGTTAAGCTGGGCCGCGAGGGACCCGATGGGCCCAACCAAAAGGTGGTCATGCAGGCCACGTTGGTAACCAAAGCGCAAATGGACACCAATTCCAAGCCGCTGCAGGACAATGAGCTGATGAAGTCGCTGCTAAATGCCGCAACAACTGGCAACGATGCAACCGCAGCGCCAACTGTTGCCGGCAACAGCTTAAAAGCCAGCAcctcagcggcagcagctgctgcagcggccGCAGCTACCAGTCTTGTGCGCGTTAATTCCAGTTCATCGCTCTTCTCCGGCTCCGCCAAGTCGCGcacagcggcaacggcaacagcggcGGCTGCAACGgctgcggcagcaacaacagccttGGCCAAGAAGTACAAGGATGTTACGCCCATTAAGATGGCAAATAATACGGCATTCCCACGCCACGATGATCCCACGCAGATGGTCGAGGCGCCCATATTCAAGCCCACCGAGAAGGAGTTTGCAGATCCGATTGAATTCATTGAGCGCATCACACCAATTGCCGCCAGATTTGGCATATGCAAGATCATACCGCCGGCTAGCTTTAAGCCAGAGTGTCGCATCTCGGATGAGATGCGCTTTACGGCGTACAATCAGTATGTGCACAAGATGTTGCATCGCTGGGGGCCCAGTGCCAAGGAGCTGAGTGCGATTAAAAAGTATTTGGCCACACAAAGCATTGTGATGAATCATGCGCCCTGGATTGGCGGCATGGAGGTGGATCTGCCACGTTTATATCATACGGTACAGGAGCTTGGTGGCCTCAAAGAGGTCATCGAGAAGAAGAAATGGGCGCGTGTCGCTGAGGAGATGTGCATACCAAAGCTGGCACAAGATCGGGTTACCAAATTGGATGACATCTACTGCAAGTATTTGTTGCCCTACGATACGCTCTCGCCGGCAGAGCGCCAGAAGCTCTTCGACGAGGTCGAAGCGGATTGGGCGAAGCGTGAGGCACGGGCGCGTCGCAATGCGGATCGCTTTGTCAATAGCACTGAGAGCGTTTCGAATGAGGAGGATGATGTATCTGAGGATGAAGATGAGGAGTCTGAGGAGGAGATCGATGGCGTGTCCATGGAGTGCATTGTCAAAGGGCGCAGCATGGCGCTCAGTCAGTTTTATCGCATTGCGCGCAACACAATGGCCTTGTGGTTCAAGAGCACTGATCCGACGGTCAACGAAGTAGAGGCGGAATTTTGGCGCCATGTCGCTGTACGCGAtagtcatgtgtgtgtgcattccGGCTCCATTGATAGCTCCGGCTGGGGCTATGGTTTTCCCAGTCCTGGCCCCAAGGGCAAGGGTTCCAACTATGCGCGGCATCCCTGGAACCTCAAGGTGCTGACAAACAATGCGGGCTCCGTGCTACGCTCGCTGGGTCCTGTCATGGGCGTGACGGTGCCCACGCTGCACGTCGGCATGCTATTCTCCGCCTGCTGTTGGTATCGTGATCCCCATGGTCTCTCCTGGATCGAGTATCTGCACACGGGCGCCTCGAAACTCTGGTATGGCATACCTGACGATCAGAGCGCCAATTTCCGTTCCGCGCTCACGTCACTGATACCGACGCATTGCCAGAACAAGACCATTTGGTTGCCCTGTGATACGGTGATGGTGCCACCACACATGCTCACCGACCGCGGCGTCTCGCTGTGCCGCATCGAGCAGAAGCCAGGCGAATTCATTGTGGTCTTTCCGCGCGCCTACACCTCCAGCTTGGCCACCGGCTATGTGGTGTCCGAGAGCGTTTATTTTGCGACCATGTCGTGGCTGGATTTGGCCAAGGATGACTTCAGAGACATTCATGAGAGCTGTGAGCCGGCCATGTTCTCGCTAGAGCAGCTGCTATTTGCCTTGGGCTACGATCAGCGCGTCAACTCGGACACATTGCAGCAGATGTTGCCCATGCTGAACGAGGTCTGCGAGAAGGAGTCGGCGGCACGCGAACAGCTTAGAGCTGCTGGCGTCACATCCACCGAAAAAGTGCAAGCGGAGAAGGGTCAAAAGGccaaaaagcaacagcagccaccgCACAAATCCATTGAGAGCGAATGCGATCTGTGCCGTGCCAATCTGTACATATCGATGGTGCGCACCGAGGACGGCAACGTCTACTGTCTGCAGCATGCGCTCAAAAATCtcaacaatggcaacattCAGGCCAAGCAATGTAAGCTGATTTATGCGTACAACGTGGATGATATTCAGCAGCTGATACGCCAGCTGCAGGAGAAGATTCAGCACAAGGCGGCCGTTAAGAAAAAGTAG
Protein Sequence: MVVSKDNKRRRKETETPPTSSSAAAAAAAAVSVAVESSPEMPKRTKVQAQRKFAQGQSAPSSANAYSAASVAAAAAAAAAAAAASSGPSTSSESLQPPIEILPNKCPAPQDFLTFLCFRGTSALPAHLDYLNQGKSKANESLPPSSSSDNNNKKKNNSSSSKKKRGRPAKAATTGKVADEQQQRQLPAADKVEAAAPPPPTVLLAGAVRKRAEVITEGNRRGARRGEALKRRSNRGGNKEKDDDQQQLDNKAEAEQQEEDEEDDDDEFFSAHDASSRNGGADETLSKLESAQPSVKRGRNQAARKAAVAVSPAATESSATKEKEKEKEKEKGPVKRVRQRESPIFIPSPESSGRMTRQRAFFEPVKVAPKPEEEKEKEEDELPVAAAAEPKKAKDAGNSNSNNNKQQQQLLTKEKTNSSIYAKDAAKQQLENGATATAAAAAEQQKGLNVFDFSSDDEQPLAKAIKLKKGVKKGATAAATAATTTTVNARGRKSAGGAAKKQQQQQREREPEEEKVEARPATPPSKPEEPQPKTKRGKALKKKAEQEIADNQLLKEQLAPPSPKKPTHSISNNARPVRRQAQAKANKSQMQLESERSASPSPTPNPNNQRSQRPSRKTKEAAAIYMGIIGHKLQLADDEEDDLSLSSFPDIPNVKQMEKMEKEMKKNATGKSQQTETAGGARKKSPRPAAATAAATDTAAATVTPAAAATDAVAAEQSSPETSAPPPRRGRPPKQTKASATAAAAATTSKPQIEGMLVKKGALALAKAKSEQQQKQQQQQQQKVDSDAEEDFLINEELNETKRKLEKSFSDSDDEPLAIKVPTAAASTAAAAAAAATSTTTTAKAGSSSKTEGGTTTTKAATTAAQEPSKTAAATAATTTTAASAAANTTTTTTTSLNCTPPKPLPLPLPMPTTQLTMLPLTAKPTPFSISPPSYAPAAAAALKAMEKKSPVPTSKILNVPATYALPGSGVGVTTATVGFGKTTSYLPQASPHYHTPYVRPATFGVAGSKTPQHPQQATATISAAAIVTSPLKYQTPPTTYPPPIEAYQCPKINPNFLTPKYERSSVLPRANNNNNNTTISSNSTTSNTNNFTAPTPTRTTLSTLTTPVAGSAATAKAALAAPAVAQCQSLNLSLTVTPPAVASTSAAAAAAAQQQPQPQPQPQLSAAPAATAAPAAASNSNAAADPLKDEIGSILAQATLMPSKEESGKIFGIASVSLAQSSGPDNTKCTLGKCGSIHKPVLGPVVPTESYFGDQLTSKERRKAKVNMTHEQIQKWLIECSSNPDEIQDDLDDDYDDSMRPQQAQTPPGPARDDKESTSFSSSSKNTRGELGKSESAWSAKGPSLKATPVLVSSAAAAAANRKETDTEPDLDFDKCVTPVNLTQKSQLEATASDRKLVEKKLKNTNSLKQSAMSAAAAASGSKRGAAAAASSTPLPPSKQKAGNKRNAAATKLSTPPPSSSSNTPASQTTTTGATATTSIGTGTGTSPAKRTPVYHSLSKVKAQTQLDNKQQQQQPQQNATKSGTTSVYAFGKEEETTPAPVAAASKVTNRRRNADNDLSAPPPALSERSPTKKRAAAAAAATAVQLTLSPTDKLEKPKATASARNAKKQQQQKQAAAAAGADSDAEGATFYIPLRQGASGGGDGGIQGVAVKLGREGPDGPNQKVVMQATLVTKAQMDTNSKPLQDNELMKSLLNAATTGNDATAAPTVAGNSLKASTSAAAAAAAAAATSLVRVNSSSSLFSGSAKSRTAATATAAAATAAAATTALAKKYKDVTPIKMANNTAFPRHDDPTQMVEAPIFKPTEKEFADPIEFIERITPIAARFGICKIIPPASFKPECRISDEMRFTAYNQYVHKMLHRWGPSAKELSAIKKYLATQSIVMNHAPWIGGMEVDLPRLYHTVQELGGLKEVIEKKKWARVAEEMCIPKLAQDRVTKLDDIYCKYLLPYDTLSPAERQKLFDEVEADWAKREARARRNADRFVNSTESVSNEEDDVSEDEDEESEEEIDGVSMECIVKGRSMALSQFYRIARNTMALWFKSTDPTVNEVEAEFWRHVAVRDSHVCVHSGSIDSSGWGYGFPSPGPKGKGSNYARHPWNLKVLTNNAGSVLRSLGPVMGVTVPTLHVGMLFSACCWYRDPHGLSWIEYLHTGASKLWYGIPDDQSANFRSALTSLIPTHCQNKTIWLPCDTVMVPPHMLTDRGVSLCRIEQKPGEFIVVFPRAYTSSLATGYVVSESVYFATMSWLDLAKDDFRDIHESCEPAMFSLEQLLFALGYDQRVNSDTLQQMLPMLNEVCEKESAAREQLRAAGVTSTEKVQAEKGQKAKKQQQPPHKSIESECDLCRANLYISMVRTEDGNVYCLQHALKNLNNGNIQAKQCKLIYAYNVDDIQQLIRQLQEKIQHKAAVKKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -