Hdun017462.1
Basic Information
- Insect
- Hirtodrosophila duncani
- Gene Symbol
- nfxl1
- Assembly
- GCA_037043425.1
- Location
- JBAMBM010000834.1:1245045-1248142[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 0.54 5.4e+03 -2.3 0.6 15 18 95 98 94 99 0.81 2 20 2 2e+04 -8.1 6.4 15 19 150 154 149 154 0.82 3 20 0.13 1.3e+03 -0.3 0.4 4 10 185 191 184 191 0.95 4 20 6.5e-08 0.00065 19.8 15.5 1 18 199 215 199 216 0.98 5 20 1 1e+04 -3.2 2.7 6 10 242 246 241 246 0.89 6 20 6.3e-08 0.00062 19.9 17.5 1 19 252 271 252 271 0.97 7 20 0.46 4.6e+03 -2.1 1.0 5 10 295 300 295 300 0.93 8 20 1.7e-07 0.0017 18.4 13.5 1 19 306 326 306 333 0.95 9 20 0.89 8.9e+03 -3.0 0.5 1 7 350 355 349 357 0.49 10 20 1.8e-08 0.00018 21.6 12.3 1 18 360 377 360 378 0.96 11 20 2 2e+04 -5.0 2.3 5 10 401 406 401 406 0.91 12 20 0.00036 3.6 7.9 17.2 1 18 412 429 412 430 0.97 13 20 3.3e-08 0.00033 20.7 14.7 1 19 439 457 433 457 0.90 14 20 0.00016 1.6 9.0 8.6 9 18 502 511 500 512 0.91 15 20 0.11 1.1e+03 -0.1 4.5 4 12 526 534 515 534 0.87 16 20 0.86 8.6e+03 -2.9 1.4 6 10 587 591 586 591 0.88 17 20 1.9e-06 0.019 15.1 4.4 1 11 597 607 597 608 0.96 18 20 0.13 1.3e+03 -0.3 16.6 4 18 638 652 636 653 0.93 19 20 1.7 1.7e+04 -3.9 1.6 8 13 658 663 657 663 0.74 20 20 1.2e-06 0.012 15.7 10.0 1 16 704 718 704 724 0.92
Sequence Information
- Coding Sequence
- ATGGATAAGTTTAACAAAGCTCAAGCCAAGAATGTAGCTGCGGCCAAGAAACTTGTGGAGGCTTACGCCTCCAGCTCAGAGGATGAAGGCGAactggatgaaaagcagataCTCGATCTGTTGTACAAGCATTACCAACCGACCGCggacaccagcaccagcagtgGTACCACTGTGCTCGGCGGTCGCACATCTTCTTTCCTGGAGAACACTCTACACTCGGGGGCAGCTACGTGTCTGATCTGCATTGGTAGCATACGTCGCTTGGAGCCAATATGGTCGTGTCAGAGCTGCTATTGTTTCTTCCATTTAAACTGCATCCAGCGCTGGGCGAACGACAGCCTGATGCAGATGAAGGTAAAGGCGGAGCAAAATGGCAGCCAAGGACACTACAATTTCGCTGGTGAATTTGTGCCGCCGAAGCGTCAGAAGTCGCTGCACTGGTGCTGCCCACAGTGTCGCCGGGATTATCAGCCGACGGAGCGACCCTCACAATACGTTTGCTTCTGTGGCAAAGAGACCAATCCGCAACCGCAGCCTTTCCTGGTGCCTCACTCTTGTGGTGAGATCTGCGGTAAGCTACTGCAGCCTAAGTGCGGACACGACTGCAAGCTGCTGTGTCATCCCGGACCGTGTCCGCCTTGCGCTCAACTGGCCAACTGTTCCTGTCTTTGTGGCAAGTCGGCTCCGCGTTCCGTGAGGTGTATAGATAAGATATGGCAGTGCCAGCAAACATGCAAATCCCTGCTAGCTTGCGGAAAACACAAATGCAACCAAAAGTGCCATCGTCCAGGGCAGTGTCCGCCCTGCACCAGCAAAAGCAACCAGCCCTGTGCATGCAAAAAGGAGACCAAGACAGTCAATTGCTCGGAGTTGAACTGGAAGTGCCAGAATATTTGCGGTGCGCCCTTTGAGTGCGGTCTGCACACCTGCGATAAGGTTTGCCATGCAGGTTCTTGCGGCGGAGGCGAGTGTCCTTTAAGCGTGAGGAGCTGTCCCTGCGGAAAGACTAGCAAATCGGGTTCCTGTAGCGAGGCCGTTGAAACGTGTGGCGATACCTGTCAGAAGCTGTTGTCCTGTGGTCAACATACCTGTGCTCAGCGCTGTCATCGTGGCCCTTGCAATTTGTGTCTGGTGACAACGAAGAAAAAATGCCGCTGCGGTCGACTTGAGAAGGAGCTGCCGTGTTCCAAGGATTTCACCTGCGAGACCAAATGCAAGCAGATGCGGGATTGTGGCAAGCATGCCTGCAATCGTAAGTGCTGTGGGGATCAGTGTCCGCCCTGTGAGAAGATTTGTGGCAAGCAGTTGAGCTgtaacaaacacaaatgtCAATCTGTATGCCACAACGGACCATGCTATCCATGCAAAATGGAATCCCAGGTGAATTGCCGGTGCGGCAAGACCAGACGTAGTGTGCCCTGTGGAAGGGAGAGAAACGCTCGCATTGTGTGCCCAGAGCTATGCCGAATTTCGGCCAAATGCCATCACGCTATCAAGCATCGCTGTCACAAAGGCGAATGTCCGCCCTGTGGGCAAGTTTGTGGCCAACCCAATGATGCCAGCGGCTGTGACCACATTTGCAAAGCACGCTGTCATGAGGCCATCAGGGTGGCCAGGCCAGCAGAGGCTGCTGTTAAGCAGAAGTACGAGTATCGTTCTTTGCCACATCCACGCTGTGAGGAAGGCGTTAGTGTCACTTGCATTGGCGGACACGAGGTGGCCATGTGGCCATGTTGGAACTCCAAGCCCACATCCTGCCAACGCAAATGTGCTCGTCAGCTGAAGTGTGGCAACCACACTTGTGCCCTGGTGTGTCACGCCGTGCCCAAACTTGATGACATGCAGCAACAAGTCGGTTGCGCCAGCTGCGAGGAAGGCTGCGCTCGACCCCGTCCGACTGGCTGTGTGCACGCTTGCCCACGAGGCTGTCATCCGCCTCCTTGTACGCCCTGCAACACTGtcataaaaagcaaatgccACTGCGGACTCAACCACCTGGTGTACAAATGTAGTGAGTTTTACGATGAGCTGGAAAGTGTTCAGGATATGCTAGAGCGCAGGGAAGGGCTACGCAGCTGCGGAAATCGTTGCCTGAAGAATTTCCCCTGTGGTCATCGCTGCCTGGCTATCTGTCACTCTGGCAAATGCCCCAACCCCGAACTCTGCCGAAAGAAGGTCCGCATCTATTGTGCTTGCAAGCGAATTAAGCTGGAAATTGCCTGTGACAAGCATCGAGCTGGGCAAACATCTCTAGACTGCGATTCCGCTTGTGATGTCGAACGCAGTCGAATTGCCGaagcagagcaacagcaaatagAGCAAAAGCGACGCGACGAAGAGCTAAGGAATCGACTGGAGATGGAAAAGTTTGAGCAAAAGTTCGGCAAACGCAAGCCTAAGGAACGCAAAACAGTGGAAGTAGGGCCAACCAAGTCTCAAATCAACTGGCAGCGGTTGGGCATCTATGCAGTCTCCCTACTGGCCGTGCTAGGTGCTCTAGCCGTAGCCTACTATGCGGAGAGCTAG
- Protein Sequence
- MDKFNKAQAKNVAAAKKLVEAYASSSEDEGELDEKQILDLLYKHYQPTADTSTSSGTTVLGGRTSSFLENTLHSGAATCLICIGSIRRLEPIWSCQSCYCFFHLNCIQRWANDSLMQMKVKAEQNGSQGHYNFAGEFVPPKRQKSLHWCCPQCRRDYQPTERPSQYVCFCGKETNPQPQPFLVPHSCGEICGKLLQPKCGHDCKLLCHPGPCPPCAQLANCSCLCGKSAPRSVRCIDKIWQCQQTCKSLLACGKHKCNQKCHRPGQCPPCTSKSNQPCACKKETKTVNCSELNWKCQNICGAPFECGLHTCDKVCHAGSCGGGECPLSVRSCPCGKTSKSGSCSEAVETCGDTCQKLLSCGQHTCAQRCHRGPCNLCLVTTKKKCRCGRLEKELPCSKDFTCETKCKQMRDCGKHACNRKCCGDQCPPCEKICGKQLSCNKHKCQSVCHNGPCYPCKMESQVNCRCGKTRRSVPCGRERNARIVCPELCRISAKCHHAIKHRCHKGECPPCGQVCGQPNDASGCDHICKARCHEAIRVARPAEAAVKQKYEYRSLPHPRCEEGVSVTCIGGHEVAMWPCWNSKPTSCQRKCARQLKCGNHTCALVCHAVPKLDDMQQQVGCASCEEGCARPRPTGCVHACPRGCHPPPCTPCNTVIKSKCHCGLNHLVYKCSEFYDELESVQDMLERREGLRSCGNRCLKNFPCGHRCLAICHSGKCPNPELCRKKVRIYCACKRIKLEIACDKHRAGQTSLDCDSACDVERSRIAEAEQQQIEQKRRDEELRNRLEMEKFEQKFGKRKPKERKTVEVGPTKSQINWQRLGIYAVSLLAVLGALAVAYYAES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -