Hdun018122.1
Basic Information
- Insect
- Hirtodrosophila duncani
- Gene Symbol
- stc
- Assembly
- GCA_037043425.1
- Location
- JBAMBM010000839.1:3162248-3166151[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 2 2e+04 -4.1 1.6 15 19 376 380 375 380 0.81 2 14 0.047 4.7e+02 1.1 2.2 4 11 409 416 408 417 0.91 3 14 5.8e-07 0.0058 16.8 15.1 1 19 421 438 421 438 0.93 4 14 1 1e+04 -3.2 1.2 6 10 464 468 463 468 0.90 5 14 4.3e-08 0.00043 20.4 11.4 1 19 474 492 474 492 0.97 6 14 2 2e+04 -6.2 3.9 7 13 496 502 496 503 0.74 7 14 2e-09 2e-05 24.7 12.9 1 19 532 550 532 550 0.98 8 14 2.3e-05 0.23 11.6 17.0 4 19 598 613 591 613 0.88 9 14 0.057 5.7e+02 0.8 11.6 1 11 653 663 653 675 0.79 10 14 2.8e-10 2.8e-06 27.4 15.1 1 18 680 697 680 698 0.97 11 14 1.4 1.4e+04 -3.6 1.5 6 10 727 731 726 732 0.61 12 14 2 2e+04 -7.4 9.4 10 18 745 754 735 755 0.75 13 14 5.6e-09 5.6e-05 23.2 12.2 1 17 791 807 791 813 0.89 14 14 4.9e-06 0.049 13.8 11.4 1 19 823 842 823 842 0.96
Sequence Information
- Coding Sequence
- ATGGCCGAGTATTGGCAACAGCAGCTCACCAATggtagtggtggtggtggagatGATTCCTCTACAGCAGCGTGCAATGGCGGCGGGAACACGACTGGCGTAGCTGcgcaagacaacaacaactatgtaaattttaatcagTTCATAATGCAGCATAATTTGTCGGGCGGCACAAGTCCAGCCACGCCAACAACCATGCAACATCCGCTGGCAAGCGGTGGAGGAGGAGCCTTTGGTTTGACACCCAACGCCAGCAATGCCAATAGTTTTGGTGGGTTCTATGCGCAGCCCTTTTTTGGCTATCAAAATGGCGATGGTCTACAAAGCGCCTCCAGCAGTCACAATTTTAATACCGCTGGCAACACCTatccaaatttatatacaccttttggcaatggcaatccCTTTGCCGCTGGCTTTGACTTCAGCACTTCCAAGCTGCAGGCGAGTGCGCCAGAGTTTGTGCCCAATTTTGGCAAGCTGAGTCTGGAGCCAAGCGGCAGTGCCAATGTGAACGGAAACAGCACTGCCAATAACACAGAAACTGCCAATGGCGAGGGAGCAAGTGCCTCCAAACAGCagggagcaacaacaacaacagccgtTAAGCAGAACTATGAACGGGAAAGGGAAACACGAGCGGGCAACAGTCGCCAGCAACGCCGCGACTATAGAGATGAACGCGAGGAGCGGCGTGAGGAGCGCTACGAACGGGACAGGGATCGGGATCGGGATCGTGAACGGAGTAAAAAGCCACAGAAGCAGCAACGCTACGACAATCATCGAAGCAATAAGCGTCGCGACGATTGGAATCGCAATCGGGATCGCATTAATGGTTTTCCACGGGCAGTGGACGAACTGGACACCAGCAATGAGAGTGCCCAGCCTTCGCCCGAGAAACAACAGCCGACACAGGCTCAGGGGTCAGGCTCGGACAATGAAAAGCTATCCCAGCGGGAGAAGCTCGTGCGCGACATTGAGCAACGGAGGTTGGAGTGTTTGGTGTGTGTGGAGCCCATTAAGGCGCATCATGCCACCTGGTCGTGCCAGAACTGTTACCATGTGCTGCATTTGAAGTGCACCATCACCTGGGCAAGCAGCTCCAAGTCGGAGACGGGCTGGCGTTGTCCAGCCTGCCAGAATGTGCTGGAGGAGCTGCCCCGCGAGTATCTCTGCTTCTGCGGTAAACAAAGGAATCCGGCCGTGAGCCGAACAGAATTGGCGCACAGCTGTGGCGAAGTGTGCTGCAGGATTGAGGGTTGCAGTCATGCCTGCACGCTGCTATGCCACCCCGGGCCGTGTCCACCCTGCCAGGCCAATGTGCAGcgtagctgtggctgtgggcGCACCAGCCGGATGATGCAGTGCGCCATGAAACAGGAGCTGCAGTGTGAAGCTGTTTGCGAGAAGCTGCTCAACTGCGGCGAGCACCGCTGCGCTGAGAAGTGTCATGCCGGCAAGTGTGCCGCCTGCCAGGAGCAAGTGGAGCAGCACTGCCACTGCGGCAAGCAGGAGCGACAGGTGCAGTGCACTCGCGAGAACCAGGACAAGCGCAGCTACTCGTGCAAAGAGTGCTGCGGCAAGCCGTTGCCTTGCGGCAATCACAAGTGCAAGGATTCGTGCCATGCCGGTGCCTGCCGGCCCTGCAAGCTGAGTCCCTCGCAGATAACGAGTTGTCCCTGTGGCAAAGTGCCGGTGCCGCCCGGCCAGCGTGCGAGCTGCCTGGACCCGGTGGCCACGTGCGAAGGCATTTGCTCCAAGACGTTGCGCTGCGGCAAACCCGCGCATCCGCATCAGTGCGCCAGCAAATGCCATCTCGGCCAGTGTCCACCGTGCCCCAAGCAGACGGCGGTGAAGTGCCGCTGTGGCCACATGGACCAGATGATCAAGTGCCGTCAACTGTCCACCCGAGCGGACGATGCTCGCTGCAAGCGGCGCTGCACCAAGAAGAGATCCTGcggcaagcacaagtgcaacgCCGAATGTTGTATTGATATAGACCATGCCTGTCCGCTGCCCTGCAATCGGACGCTGACCTGCGGACGCCACAAGTGCGACCAGCCCTGCCATCGGGGCAACTGTCCGCCCTGCTATCGCAGCAGCTTCGAGGAGCTGTACTGCGAGTGTGGCGCGGAGGTGATCTATCCGCCGGTGCCGTGCGGTACCAAGCGGCCGCCCTGCAAGCGGCCCTGCTCCAGGACGCATGGATGCGAGCATCCGCCGCAGCACAACTGTCATTCGGTGGCCACCTGCCCGCCATGCATGATGTTTACCACAAAGTGGTGCCACGGACAGCACGAGCAGCGCAAGACCATACCCTGCTCCCAGGCCAGCTTCAGTTGCGGCCTGGCCTGTGGCAAGCAGCTCGCCTGTGGTCGCCACAAGTGCATCAAGCCCTGTCACGAGGGACCCTGTCAAACGGCGGGCGAAGTGTGCCGCCAGAGCTGCACCAAGCCGCGCACTCCGTGTGGACACAAATGCATGGCTGTCTGCCACGAGAGCGACTGCCCGGAAACGCCTTGCAAGGAGCTGGTAGAGGTTCAGTGTGAGTGCGGACATCGCAAGCAGAGCAGAAGCTGCCAGGAGGTGGCCAGGGAACATAATCGCATTGCTACCGCTCAGCTGGCCTCCTCCATGGCCGAAATGTCGCGGGGCAACTATATGGAGTTGAGCGAGATCTTGGCGCCCGCCAAGTCAAACAAGTCGAACAAAACTTTGGATTGCAATGATGAGTGTCGCTTGTTGGAACGCAATCGTCGCCTGGCTGTTGCCTTACAATCACGCAATCCGGATACGCAACAGAAATCGTTAACCAAGTACTCGGATTTTGTACGTGGATTTGCCAAACGCAATCCAGCGCTGACCAAGAGCGTATACGAGACATTGAGTGATCTGGTTAAGTTGGCCAAGGagagcaaacaaaaatcgCGAAGCCATTCATTTCCCACCATGAATCGGGAGAAGCGACAGCTAGTGCATGAGCTATGCGAAATGTTCAACGTGGAGTCCGTTTCCTACGACAAGGAGCCCAATCGCAATGTGGTGGCCACCGCGCACAAGGATCGGTGCTGGCTACCCGCCACCAGCATTATGGAGGTACTGGCTCGCGAATCCGGACAACGTCGCGTGCCCGTGCCCAGCAACAATGCGTGGAGCCTCAAAAAGTAG
- Protein Sequence
- MAEYWQQQLTNGSGGGGDDSSTAACNGGGNTTGVAAQDNNNYVNFNQFIMQHNLSGGTSPATPTTMQHPLASGGGGAFGLTPNASNANSFGGFYAQPFFGYQNGDGLQSASSSHNFNTAGNTYPNLYTPFGNGNPFAAGFDFSTSKLQASAPEFVPNFGKLSLEPSGSANVNGNSTANNTETANGEGASASKQQGATTTTAVKQNYERERETRAGNSRQQRRDYRDEREERREERYERDRDRDRDRERSKKPQKQQRYDNHRSNKRRDDWNRNRDRINGFPRAVDELDTSNESAQPSPEKQQPTQAQGSGSDNEKLSQREKLVRDIEQRRLECLVCVEPIKAHHATWSCQNCYHVLHLKCTITWASSSKSETGWRCPACQNVLEELPREYLCFCGKQRNPAVSRTELAHSCGEVCCRIEGCSHACTLLCHPGPCPPCQANVQRSCGCGRTSRMMQCAMKQELQCEAVCEKLLNCGEHRCAEKCHAGKCAACQEQVEQHCHCGKQERQVQCTRENQDKRSYSCKECCGKPLPCGNHKCKDSCHAGACRPCKLSPSQITSCPCGKVPVPPGQRASCLDPVATCEGICSKTLRCGKPAHPHQCASKCHLGQCPPCPKQTAVKCRCGHMDQMIKCRQLSTRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLTCGRHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKRPPCKRPCSRTHGCEHPPQHNCHSVATCPPCMMFTTKWCHGQHEQRKTIPCSQASFSCGLACGKQLACGRHKCIKPCHEGPCQTAGEVCRQSCTKPRTPCGHKCMAVCHESDCPETPCKELVEVQCECGHRKQSRSCQEVAREHNRIATAQLASSMAEMSRGNYMELSEILAPAKSNKSNKTLDCNDECRLLERNRRLAVALQSRNPDTQQKSLTKYSDFVRGFAKRNPALTKSVYETLSDLVKLAKESKQKSRSHSFPTMNREKRQLVHELCEMFNVESVSYDKEPNRNVVATAHKDRCWLPATSIMEVLARESGQRRVPVPSNNAWSLKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -