Hdun014620.1
Basic Information
- Insect
- Hirtodrosophila duncani
- Gene Symbol
- grn
- Assembly
- GCA_037043425.1
- Location
- JBAMBM010000810.1:1798562-1840737[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1e-19 7.1e-16 57.7 4.7 1 35 429 462 429 463 0.98 2 2 1.3e-18 4.2e-15 55.2 6.0 1 34 489 521 489 523 0.97
Sequence Information
- Coding Sequence
- ATGGATATGACCTCAACAGCGGAGGCTGCCGCTCGCAGCTGGTATGACAGTCCGCGCttaggcggcggcggcggatCCCCACAGACGAATGGCCTGGGCGGAAGCAGCCTGGCCCACAGCCATCACAGTCTATCCAGCGGCGCCTCTTCGGCGGGCAGCAGTGTCGGCGTGGGCGCTGCCCTAGCCGGTGGCGGGGCTGGACTCGATACCAGCGACATGAGTGCATTCTATGCCCTGGAAAGCAATGGCCATCATCGCAGATACTATCCAAGCTATCATCAACACACATCCCGCATGCCCTCCTCCCATGCCACGCCCCAAGTGTGCCGGCCGCACTTTCATACACCGCTAAGTCCTTGGCTGACCAGCGAGCACAAATCATTTGCACCCGCCAGCGCCTGGGGCATGGGACAGTTTGCGTGCCCGCAGGAGCCGCAGGTGGAGCACAAGCTGAGCCAAATGGGTCAAAGCCATCAGACAACGGCAGCCGGCCAGCATTCGTTTCCATTCCCACCGACACCGCCAAAGGATTCAACGCCCGATTCAGTACAAACCGGTCCATCCGAATATCAGGCCGTGATGAACGCCTTTATGCATCAGCAGGCGACAGGCTCTACCTCACTGACGGACGCCAGCTGTGCTTTGGACATTAAGCCTGCCATCCAGAATGGCGTTGGCGGCAGTGCATCCTCCGCCCTTGCGGGCAATGGGCCcagcagcgggagcaGTCAAAActcccaacagcagcagcaacaacaacagcaacagagcagcaacagcagcagcaacaataacaacaatgcctCCTCATCCGCCTCGACTTCGAATGGCCTTTTCGATGGCACCGCCCAGGCCCATTATggagccaatgccaatgccaacagcTATGACAGCAGCTATGCCAGCTATCATCATGCGGCGGCACATCATCAGGCCGCTGTGGCGGCGGCCAATATGTTTCAAAGTTCCTCCGCGGCAGCGGCCGCTGTCCGGCATAGCATGggcgcagcagcagtggcggcAGCGCAggcgcatcatcatcatcacagtCATAGTCACAGTCATCATCATGGTGCGTCCGCCTCCTCCTCCAGCTCTAGctcggcaatggcaatgcatggcggtggcagtggcagcattGGCATGTCCGGCATGGGCAATGGCATTGGCGGCGGCTCATTGGGCggcagtggtggtggtggccaCAACAGCTCCAGTGTGGGCGGCGGCATCGATACCAAGCCCGTGCGAACGAAACCCCGGACAAGTGCTGAGGGTCGTGAGTGCGTCAATTGTGGTGCCACCTCAACGCCACTGTGGCGACGCGATGGAACTGGACATTATCTGTGCAATGCCTGTGGCCTTTACTACAAAATGAATGGACAGAATCGGCCACTGATTAAGCCAAAGCGAAGACTGACATTACAGTCGCTTCAGAGTGCGGCCAAGCGAGCGGGCACATCCTGCGCCAATTGCaaaaccacaaccacaaccctTTGGCGTCGCAATGCCAGCGGTGAACCTGTTTGCAATGCATGCGGATTGTACTACAAGCTGCACAATGCGGCACAGGAACCCATACCCGGCGCCGTCGCCTGCTCAGCTGTTGCACCCAATTTGCCGACAACAGGCAACATACACTGTCTGTCCTCCATGCTCAGCCCACCCACTTGGTTGGGCCGAAGCCTCTCGTGGTATGGAGCTGGAGCTCAGCCTGTCAAACGGCAAGTCAATCGTCCACTAACCATGAAGAAGGAGGGCATTCAAACGCGTAATCGCAAGCTGAGCTCCAAGTCGAAGAAGAAAAAGGGTTTAGGCGGCGGCTGTTTGCCAATTGGCGGACATCTGGGCATGGGCGATTTCAAGCCACTCGATCCGTCAAAGGGCTTTGGTGGCGGCTTCTCGGCATCAATGGCGCAACATGGTCATCTTTCCAGCGGCCTGCATCCGGCACATGCGCACATGCACGGCAGTTGGTATACCGGCGGCATGGGCGCTTTGGGCGCCTCAAGTGGCCTGCAGGGTGGCTTCTCCACGGCCGGCTCTCTGGGTGGCGCCGTTGTGCCCCACTCGCAGCCCTATCACTTGGGTCTCAGCTCCATGGGCACCTGGCGGACTGACTACACGTGA
- Protein Sequence
- MDMTSTAEAAARSWYDSPRLGGGGGSPQTNGLGGSSLAHSHHSLSSGASSAGSSVGVGAALAGGGAGLDTSDMSAFYALESNGHHRRYYPSYHQHTSRMPSSHATPQVCRPHFHTPLSPWLTSEHKSFAPASAWGMGQFACPQEPQVEHKLSQMGQSHQTTAAGQHSFPFPPTPPKDSTPDSVQTGPSEYQAVMNAFMHQQATGSTSLTDASCALDIKPAIQNGVGGSASSALAGNGPSSGSSQNSQQQQQQQQQQSSNSSSNNNNNASSSASTSNGLFDGTAQAHYGANANANSYDSSYASYHHAAAHHQAAVAAANMFQSSSAAAAAVRHSMGAAAVAAAQAHHHHHSHSHSHHHGASASSSSSSSAMAMHGGGSGSIGMSGMGNGIGGGSLGGSGGGGHNSSSVGGGIDTKPVRTKPRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLTLQSLQSAAKRAGTSCANCKTTTTTLWRRNASGEPVCNACGLYYKLHNAAQEPIPGAVACSAVAPNLPTTGNIHCLSSMLSPPTWLGRSLSWYGAGAQPVKRQVNRPLTMKKEGIQTRNRKLSSKSKKKKGLGGGCLPIGGHLGMGDFKPLDPSKGFGGGFSASMAQHGHLSSGLHPAHAHMHGSWYTGGMGALGASSGLQGGFSTAGSLGGAVVPHSQPYHLGLSSMGTWRTDYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -