Basic Information

Insect: Hirtodrosophila duncani
Gene Symbol: -
Assembly: GCA_037043425.1
Location: JBAMBM010000098.1:4256264-4262763[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.015 0.92 10.2 1.8 1 23 1076 1098 1076 1099 0.95

2 8 0.011 0.69 10.6 0.2 1 23 1104 1127 1104 1127 0.98

3 8 0.19 12 6.7 2.3 1 23 1329 1352 1329 1352 0.93

4 8 7.3e-05 0.0046 17.5 0.8 1 23 1360 1382 1360 1382 0.98

5 8 9.5e-05 0.006 17.1 1.3 1 23 1389 1412 1389 1412 0.97

6 8 2e-05 0.0012 19.3 1.4 1 23 1418 1440 1418 1440 0.97

7 8 1.7e-05 0.001 19.5 0.9 1 23 1445 1467 1445 1467 0.99

8 8 3.4e-05 0.0022 18.5 5.2 1 23 1473 1495 1473 1495 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.015	0.92	10.2	1.8	1	23	1076	1098	1076	1099	0.95
2	8	0.011	0.69	10.6	0.2	1	23	1104	1127	1104	1127	0.98
3	8	0.19	12	6.7	2.3	1	23	1329	1352	1329	1352	0.93
4	8	7.3e-05	0.0046	17.5	0.8	1	23	1360	1382	1360	1382	0.98
5	8	9.5e-05	0.006	17.1	1.3	1	23	1389	1412	1389	1412	0.97
6	8	2e-05	0.0012	19.3	1.4	1	23	1418	1440	1418	1440	0.97
7	8	1.7e-05	0.001	19.5	0.9	1	23	1445	1467	1445	1467	0.99
8	8	3.4e-05	0.0022	18.5	5.2	1	23	1473	1495	1473	1495	0.99

Sequence Information

Coding Sequence: ATGCCTCCTCGAATGTTCCCACCCCCAAACCGCACGGGCGGGTGCCATAACTTTGGCTGGCTAACCATTGGCACCCATAGATCTTGGATCAAATGCAATGATGGTCTGCCGCAGGAGATTTGCCGCCAATGTATGGCGCAGTTTCTGATGGTCGCCAAGTTCCGGCGGAAGTGTTTGCGCGTGCAACAGCGACTGCAGGAACGCGCCTTGGAGTTGGCCGAACAGAATGCCGCAAGACTGGAGAAAACAAATCAGGAGGATTACATTCATCTGCCCAAGTCGCAAACCGAGCGCAAACGTCGTCTGGTACTGGAGAACGaccaacaagagcagcagcaggccccGGAAAAGGTATCCAATGCGGAATCATTGGAAAAGGAGCAGCCAAAACATGTTAAGACTGAGGCAGAGCAGCTGCCCCCGCCAAAGATGCGACGTCTGCAGCTGCGTTTGCGCAAATTGCGTGCGTCAACCATATGCGCAGCCTCCAGTCAGGTGTTGGCACAGAAGGACGTTCGCGAGAAGATCAATGTGCCGTGGAAGACGAAAGCGGCCCGCAAGCAATTGTCCGAGACCTGGTCCCCTTGCTCAACTGGCTACTCTGCGTCGCCATGCTCGTTTTTGTCCGATCGGGAGGTAGAGATTAGGAGCGCCAGTACCACTAGCAATAGTTCCAGACAGTCAGACAGTGAGACAGTCACAGACGGTGGATCATCTGCCAGCAAGACGCCATCGGAGCAACTGAGTGATATATCGGTGGGGCCACTTTGCGGTTTTGAGGACGATAGCAATCCCTCATCAACGACTTCTGGGCCAGTGTCAGGCATGCGGTTGGCTGTCCGACGTGTGGGACGACCACGAAGTACTATCAATTATAATCCAGCCAAGCGGCTGAGGCGCTCAGTGGCCAAAACCGTAGAGCGTCGACGATCGAAGAGTGAGTCCAGCAAGGAGAATGAGAACCAAACACAGGCTGTCCAACAGGAGCgggagctggagcaggagaAATTAAAGTCTGATGAGCAGCCAGAAGCTGCCAACAAGGAAATTTATCCAAAGCCGAAGGTGCAAGGCGATATCGTTCAGGGTGTGGGCACAGAGGAAATCACTGAATCAGCTGAATCGACGAGGGAAAGTACTTTGTCGTCGGAGACATTGGTTCCACAAACCACTTCAGATGAGAGTCAGCAAGGGTCGTCCGTTCTCTCAAACGAGACAGAGGAAGTCAATGCTAATGAGATGCCCTCAAGCAATGCAAAAGAGGTTCCCTTAATTGAGTTGACAGAAAGCTCAGCCATGGAAAATCCAGCAAAGAAACCAGAGATTGCCATGGATGAGACTGAAGGTGTTGAGATTTCCAGCTCAGATATCAAGAAACGCGAGATCCAGCTGCAATCCGAAGAGTTGACTTCATCAACAGAGGCCAGTGAGCAAACGCAGCCGGAACAGGAGTTGGAGATGTCAAAGGCATCTGAGCCGAAGTCAGAAATTGTAGTCAGCATACCACTGGAGGTCCTTAGCGATGATTTGCAGCGCAAACTGCGCATCGGCCAGGATGAGGAtaagcaggagctggagcaaCAGCCGCAACCCGCAGTTGCCAAGGACACGTCAAGTGATTCCTCCGACGATGTTAATAACAATGAGAATGGTGAGAATTTTCGCCAGAGTGCTACAGCAGATAGCTTCAATTCTGCTGTAGCACTCCAAACGTCCGAAATTGAAGCGCAGCCCAATGGAGGAGAGACAATAGCCCAAAGTGATCTGACGGAACAGCCAGTGCTGGTGGCGGAAACCCCGCCAGATGAAGCCAAACAGAAAGAGCAACCAGACGAGCAGCAAGCGATCGTTCTAGAAGAGGAGCTGGATGACATACCAATGGTACGCAGCAGCCAATCGGTGGCCATCACCGCCTCCACGCCCATGAACTTCCTAGCCGAATTCGAGAAACATTGCGAAAAGGCCCTGAAGCAGCCGAGGGAAGCCTTTACTCCCGCACCAACGCCACCGCCAGTGGATGAACTGAACGCCAAGCAGCAGTTGGAGGAGGAAATGAACGATGTGGAGAGCACACTGAATGGCATACTCAATGAGATGCAAGATCAGCACATGTATCCACCCGTCTGCCAGCACATGGATGAGTTTCTAACACCGGCCGACTATGCGCCCATAACCGAGCAAGAACCGAGCCCAACCTCACCTGCCAGCAATGCCTTTGAGACGCAGCCTacacatcagcaacagcaacagcagcagcattccaAATCATCTGAGGGCGATCTCTTTGACAGCGCCAGCTTTACCAATGAGTTGATTGCCTTTCAAAACGATATACCCTGCTTTGAGAACATCGAGGTGGCACCGGAATCCTCGGCAGAGCAGCAGAGCCTGCAACTTGAGCTGACGCAGTTGCTCAATGAGCTGCAACCGCCAGCACCGGCTTTAGTCACTCCGTCACAGGAAACGGTGTCCATCAGCTATGAACAGCTCTATCAGCCAGTGGCGGCGAACTCCTCTGGCCAGGGCAAAGTGCAGCTCATCGCCATGGAGCCGCAGCAACCgcaaccgcagcagcagcagcagcagtggcaaccAGCTCAGCCAGTCACAcagctgcaatggtcagctGTGGGTGGACTGGAAGCCATCAAATCAACGCCTCTGGAGAGTGTCGCTAGTCAATCGCCACCCGTCAATGCCACAACTACCACCACATACTATATCAATGCCAGCGATCTctatcagcatcagcagccacagcagcaggtTGAGACCTACACCATGCTGCAGTCGGCTCAGCTGGACACCAATGAGAACTATGTGGTAGAGCAGGCTAATCCTCAGCAATCGCAGCAGCCCATCATGATACTCATACAGCAGCAACCGGAACTGCAGCAGCCGGTGGCATCGGCCAGTAATCCTCAGCAGGCGCCGCTGCAAATCTATGGTGCGCCCATAAGCAATGATCTTCACGCcctccagcaacagcagcaatctCTCCACCACCAGAACCAAGTACAAAATCATGCAGTATTAGGATTGCAATCACCTTCATCCCACCCCGTACCTCATCCGCGAACTACTGCACCCATCTCCACCATTCCCACCAACCCCAAAGGTCGTCCGCCTTCGCTGAAGTGCCGCTTCTGCCAGAATGGACCACGCTTCTCCAGCAGCCTTGAATATAGCCGCCACATCATCGAACTGCATCCCGCCGTGGCGCCCTTCAACTGTCCCCATTGTCCGCTTGCCTTTGCCGGTCGCAGCAAACGCTCCCAGCACATACTCAGCCACCATGTTGTCCAGCAGTATCAGTGTGGTCAATGCACCCAAGTGTTTCCCGCTCAGCGTGCACTCGACTTGCACATACAACGCTTCCATATGCCCCACAACAATGGAGCAGCCGGAACAGTGGGCGCCGGGGCGGGTGTGCGTGTTGAGGAGGTCCAACTGCAGATGAATAACACAGAGCCCATGCGCTCGCCGTCAGTCCTGGAGCTGCCGACAATTACAACGACAATGCCACGCAAGACGCGCATCCTTTGCTGTCCTGACTGCGAAGATTGCCCCTCAGCCAATGGTCATCAGCATGGCGCTGCGGATGGAGCGGATGTGgtccaacagcaacatcaacagtaCGATGAACTGCAAGTGCCACCAATGGTGATGACGCCGCCTTCGACAGTTTCTTCCTTGCCATCGCCACAGCCGTTGAGCACGCCGCATGTAACGCTCGCCTCGCCGGAACAATCTGAGCCGGATTCAACGACCACGCTTCGGCAGTTCCGCAAACGCTGCCTGGCCAACGGcgtgcaggcaggcagtcccTGTCCCAGTCTGTCGCAGCCAGCCACACCCACGCCAGTGCCATCGCCGTCGCCCTCCTCGTCACCATCATCGTCAACCATGGAGCAGGCAGCTGCTCCAAACGCTGGACCTTGCACAAATGCGGCATCCACATCCCCCTGCTCGACGCGTGCCAGTCATCAGTGCATTTACTGTGAGGAGCGATTCACCAACGACATCGCTTTGCGTAAGCACCACCAGCTGGCCCATGGGGCACAGGCTGCCATGCCGTTCGTTTGCACGATCTGTAAGCGGGGCTATCGCATGCGCACGGCTCTGCAACGCCACATGGAGTCGCACGATGCCGAGGGCAGACCGTACGAGTGCAACTTTTGTCACGTGCGTTTCCCGCGTCCCTCGCAGCTAACGCTGCACAAGATCACCGTTCACCTGCTGTCCAAGCCGCACACCTGCGACGAGTGTGGCAAACAATTTGGTACGGAGAGCGCCCTAAAGACACACATTAAGTTTCACGGTGAGAACGGGTTTCAGTGCGAGCTATGCGATCAGGCATTCGCGTATGTCAAAGACCTGCGCAAACATCGGCGCACCCACAATGAGGAGCTGTTTTACAAATGCGACTACTGTTCGCGCTCCTTTATGCATTTTAGCAATTTTCGCGCTCATATGAACTCTCACTTGCCGCTGGGCGTGTTCCTAAATGAGGAGACGGCGGCCCTTATGCCCAGCCCCAGCAGTAATGTCACCGAGAAATTGGGAAATTCGCCCATGCCAAATGAAGAGACGAATTTCACGCCTTTGACGCCACTCAGCAGTCACAATGGTAGGGATGAGTGTCCCAGTTCGGTGGAAATGGATGCGGAGACAGCAACGGAAACAGGATCAGCCATGGAAACATTAACTTCAACACCATAA
Protein Sequence: MPPRMFPPPNRTGGCHNFGWLTIGTHRSWIKCNDGLPQEICRQCMAQFLMVAKFRRKCLRVQQRLQERALELAEQNAARLEKTNQEDYIHLPKSQTERKRRLVLENDQQEQQQAPEKVSNAESLEKEQPKHVKTEAEQLPPPKMRRLQLRLRKLRASTICAASSQVLAQKDVREKINVPWKTKAARKQLSETWSPCSTGYSASPCSFLSDREVEIRSASTTSNSSRQSDSETVTDGGSSASKTPSEQLSDISVGPLCGFEDDSNPSSTTSGPVSGMRLAVRRVGRPRSTINYNPAKRLRRSVAKTVERRRSKSESSKENENQTQAVQQERELEQEKLKSDEQPEAANKEIYPKPKVQGDIVQGVGTEEITESAESTRESTLSSETLVPQTTSDESQQGSSVLSNETEEVNANEMPSSNAKEVPLIELTESSAMENPAKKPEIAMDETEGVEISSSDIKKREIQLQSEELTSSTEASEQTQPEQELEMSKASEPKSEIVVSIPLEVLSDDLQRKLRIGQDEDKQELEQQPQPAVAKDTSSDSSDDVNNNENGENFRQSATADSFNSAVALQTSEIEAQPNGGETIAQSDLTEQPVLVAETPPDEAKQKEQPDEQQAIVLEEELDDIPMVRSSQSVAITASTPMNFLAEFEKHCEKALKQPREAFTPAPTPPPVDELNAKQQLEEEMNDVESTLNGILNEMQDQHMYPPVCQHMDEFLTPADYAPITEQEPSPTSPASNAFETQPTHQQQQQQQHSKSSEGDLFDSASFTNELIAFQNDIPCFENIEVAPESSAEQQSLQLELTQLLNELQPPAPALVTPSQETVSISYEQLYQPVAANSSGQGKVQLIAMEPQQPQPQQQQQQWQPAQPVTQLQWSAVGGLEAIKSTPLESVASQSPPVNATTTTTYYINASDLYQHQQPQQQVETYTMLQSAQLDTNENYVVEQANPQQSQQPIMILIQQQPELQQPVASASNPQQAPLQIYGAPISNDLHALQQQQQSLHHQNQVQNHAVLGLQSPSSHPVPHPRTTAPISTIPTNPKGRPPSLKCRFCQNGPRFSSSLEYSRHIIELHPAVAPFNCPHCPLAFAGRSKRSQHILSHHVVQQYQCGQCTQVFPAQRALDLHIQRFHMPHNNGAAGTVGAGAGVRVEEVQLQMNNTEPMRSPSVLELPTITTTMPRKTRILCCPDCEDCPSANGHQHGAADGADVVQQQHQQYDELQVPPMVMTPPSTVSSLPSPQPLSTPHVTLASPEQSEPDSTTTLRQFRKRCLANGVQAGSPCPSLSQPATPTPVPSPSPSSSPSSSTMEQAAAPNAGPCTNAASTSPCSTRASHQCIYCEERFTNDIALRKHHQLAHGAQAAMPFVCTICKRGYRMRTALQRHMESHDAEGRPYECNFCHVRFPRPSQLTLHKITVHLLSKPHTCDECGKQFGTESALKTHIKFHGENGFQCELCDQAFAYVKDLRKHRRTHNEELFYKCDYCSRSFMHFSNFRAHMNSHLPLGVFLNEETAALMPSPSSNVTEKLGNSPMPNEETNFTPLTPLSSHNGRDECPSSVEMDAETATETGSAMETLTSTP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -