Basic Information

Gene Symbol
Hivep2_1
Assembly
GCA_037043425.1
Location
JBAMBM010000633.1:1731672-1739680[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 8 0.00026 0.016 15.8 0.3 1 23 384 406 384 406 0.98
2 8 0.00037 0.023 15.3 2.8 1 21 412 432 412 436 0.89
3 8 0.0084 0.53 11.0 0.1 1 19 1036 1054 1036 1057 0.93
4 8 3.5e-06 0.00022 21.7 2.0 1 23 1775 1797 1775 1797 0.99
5 8 1.5e-05 0.00092 19.7 5.3 1 23 1803 1827 1803 1827 0.92
6 8 6.9e-05 0.0043 17.6 3.4 2 23 2284 2305 2284 2305 0.97
7 8 0.001 0.063 13.9 1.2 1 23 2311 2335 2311 2335 0.91
8 8 0.0032 0.2 12.3 2.7 1 23 2356 2380 2356 2380 0.92

Sequence Information

Coding Sequence
ATGGAagatgcaacaacaacacaaagcaaGCATTATAAAACCACGgccaaacaacacaaaaacaacaaagtaacTAACAATACACGacgtgcaacagcaacatcaacagcagcagcagcagcaacagcagcaacaacaacaacaactaagaaGCAAACATATCGCGAACCTGCAACTACAACGACGACCACCAgcaacacagcagcaacaaacacTACCACAACAcagaaaccaacaaacaacagcaacaacaacaaagtcaaTAATAAATCAGCAACAACCGCAGCAGCCGTAACATCAATATCAGCAGCAGTTGCCGAtgttaccaacaacaagcCCAGTACAAGCCCGCGGAGTAAATTAAACGAGCTGCAGCCCGCTGCCAAAATTGTGGACAGCAAGatcaccaacagcagcaacagcaccaacagcagcatcatcattaacaacaagaacaaccacaGTGATAATAGTATTAGTGAGGATAATTATGAATTTAAGGCTAGAGATAACACGAACCTAAGTGATAGCAAAATGACGCTACAGCATGTGGCCAGTGCGGCAagtgtggcagcagcaaccaagGAGCCCAGCCAGGGcagtaacaacagcagcatggCGGCCACCACAGCGGTGGTTGCCGATGGGGATTGGGTCAACAATTCGCGGTATTTGCACAAGAAATTCAAGCGACTGGCCAGCACCACCGACCCGGACGGCATCAGCAGtggtggcagcagcagtggcggcAGCGCATCGCTTGGCGATCCCACTCGCACCACATCGCTGTCCTCCAACAGCTCTTTGTCACCGCCTCCACCGGCTGTGGCAGGCCCAGCTCCTACGCCCCTGCTCAATGGACACcatccgcagcagcaacaacagaggGAGCTGCCGCGTCAGCCTACAGAAAACAGTGCCAACTTTTTAAATAACAATCATGCCAATGAAGAAAGCAAAGGTATTGCCTTGACTGGTCCCAGAAGCCGTACGCCActgagcagcagcattggCAATTATGTTGCCAATGCGACATTGTCGCCGGCAACATTtgctcagcatcagcaacaaacACAGCCAACGACACCCACAATACAAACGCCAACAGCAATCGCCACTACCGTTGTTGGCGGCGAGAAGCCAGGGCGCTATATCTGCCCCTATTGCAACATGCCCTGTGCCAAGCCATCCGTGCTGCAAAAACACATACGTGCCCACACTAATGAGCGTCCATATCCGTGCGAGACGTGCGGGATTGCTTTTAAGACCAAGAGCAATCTCTACAAACATTGCCGCTCTCGCTCACATACGGCGAGAGTGCGGGGCCTCGAGGTCCCAGACGATGCGGACGAAGGACTGTCCGATCAGGATGTGGATGCCGAACTGAGCAATAGTAGCTCTGAGATGCTGAGTCGTCCTGGCTCGCCCTATGAGGAGCCCACGCCCTCGCCAACGCCCTCCCCTTCCACACTGTCGGCTTCAAAGAGCGCCTAcctgcagcagccgccgctgccgcagcATATACAACAGTTGCCGCTGGGTTCACCGGCAGCTGGTACCCTGCCTCCAGCGCCAGCCACAACAGATATCCTGCTCTCGGCCACAGCCCAGCATCGCCAGTCTATTGAATTCAAGCCATACAAGCCCAAGTTCCATAATGCCTCCCTCTATGCGCCCGGCAGCAGcaaggaacagcagcagcaattgcagcaggcccaacatcagcagcaacagctggcggtccaacaccagcagcaacagaaactcACCCTACAGCCATTGGTTCAGCAGACACATCCCGCTCACCCCACACATCCCACCCTGTCACCCAGCACCCAGATGAAGCTCAACAACCACATCAATTCTCatcagttgcagctgcagtttcagcagcagcagcatcaacaacaccaCCTGCACGCCCAGCAATCGTTGCTGCTGACGGCTAGTCCTGGCGCACTGGCTGCAATTCCGTCCACTGGGGTTTACTACCTTGGCCAGCCGCCATATTACAATTCGGCCGTGGCGCTGGCTGGGATGCATCAGCATGCTCTCGCCtatcagcagcaactgcaactgcagcagcatttgcaaatgcaacaacaacagcaacactcgCCAATGCTAAAGGCTTTACCGCAGGCGCAGCCGCAGTCACTGCCACAACCACCTCCTCCAAGCCATCCCACACAGCAGCTGACTCGATCCAATAGCCAGGCAGCCAATGTTGGAGCTCCGGCAGCACCTTCTTTGGCTGATCCCGTCACAACCACGTCGTCGAGCAATCTTAGCAGCTTTGCCAGCGGCAAGCAAGTGAACAGGGAAATGCTGCAGGAGCGCATTTCCAATATAATCTCAAGGAACGAGGCCATAGTGGAGAACAAGGAGATTCTGCTGCAAAAGAAATATCCCAAACAGTTTAATCGCTCGCGCAGCTtcaacaatgccaacaacaacagcagcaacagcaacgcgTCTGCATCGCTGGCCAGCAACAGCCAATTGGGTGGTATCGCCAGCAGCTCTGAGCGGGAGACCAAGGTGAATCTGGCCCAGGCAATTgtgcagaagcaacagcagcaacaacagcaacaacaacaacagctacagtTACAGCATCAACAATACCAAATGTacctacaacagcaacaacagcagcagcatctgcaacagcagcaaccacagcaaTTGGAGCCACCCAATGGATTGATGAAgcgcagcaacagctacaagTCAGCACCACTTACACCTGCGCCTACACCACCTGTAAAACAGCAATTGCCACCACCGCCCTCACCCTTGCCAATGCAAACGCTGCAATATCGCCAGGATCCGGCTACACCCGTACCCAAGCTGGAACTGCAGGCGGCCCCTGGACATGTGATGCCTTTAAATCTATCTGCCAAGCCGAAGCCGGCCACTGCCATGCCCAGCACCTCTGCCGTGCCCGTATCATcgacaccaacaccagcagcagcatcggcgGCACCCGCACCGTCCGCCAAGATGGGCTTTCCAGCTTCAACTAACAATTCCATAATCAAAAATTTGCTCTTGAATGCCCGTGGACTGGCTGTGCCCATTGGCGAGGGCGATGATGCTGTGTATTCCTGCCCCATCTGCGCCAGCGTATTCCGCAGTGCGGATGAATTGAAGCAGCATAACAGCACCTACTGCCAGGACGCCAGCTCAAGTGCTCCAATGAGTCCAGCCTCCTCGCCGAGCTCCAAATACTTTCGGTCCAATTCGATCTCGCTGAGTCTGCCGGAATTGAAGACGCACATGGCCAATTCGAAGAATCCTTTATCGCTGGCGAAGCTGGCCTTCTACCAGCTAAAGACCAAGCCCAGTAGCCTGGTGCTAAGTCGCCTCAGTGCTGCCCAGTCGCCAGCCAGGACGTCCACGGTGACAGCGACCTCCTCTGCTCCAGCCGCcaatagcagcagcactagctctgcttctgctgctacATCCCCCGCCTCTGCTGCGCCCACTGCGGCTGTGGAGTCCCTGCGCTTTGTGGATGCTCCGCTGCCCTCGCCTGGCCCATTGCTGGGCAAGACTCCGCTGGTGGATTATGCCCAGCAAAGTGCACCCCGTAAGCCTCAGGATGCCCAGGTGGTTATCACGAAAATGCACGAGGACCGTCAGTTTATGGACGTGGAGGCTCAGCATTCTATGCCCGCCAAACGACTCAAGATCAGCGAGAATGCCGGCCCGGCCGCTCCTACATCCTTCACCTTTCCACCGGAAAAGATGCTCTTCGGTAATAATCAATCACAAGAGCTGCAGTACAGCAAGGAGGAACGCCTGCGGCGCTTCACCTCCTCGGGCGGCACTATGATACCAATCTCGGAGTGCCCTGATCTTGACAAAAGTCCCAAGATGATACGCACACCGCTGCTGTCCGGCGGCAGCTTTCAGGAAGTCTCGCCCAAGATCAGCGAGTCAGCCAAGGACCGAAAGCAGCCACCTGGCCATGCCAGCTTCCTGCTCAACGCCGGCTCGGCACCTCAGCATTTTCAGTTCCCGCCAATCAATTCGATCACTGCCTTCAATCCTCTAACCCTGCCGCCCATGGGCGGAGGCGACAAAGTTGCGACTATTGCCACGCCCATTCCCTACGTGCCAGGTATACCAGGACCAGGCAGCCTAACGCCACAGGTGCCACTGCTATTGCCGCCACCGCAGCAGCTACAACTGCCAACTCCTGGCGCCCGGGGACGCAGCCCGAACCGCAAACAGCCCAGTCCTGGCGAGCTAAAGGCTCTGTCCCCTTTTGGAGGTGTCCAGAACGTGCCCAGTGAGTTCAGCCGCCAGCCCCCCACTCCTGCCCAGCGTAACGCGATGCAgtggaacagcaacagcaacaaattggAATCGTCCAAGAAAGTTCCCTTCAACTTTCTGCGCATGGCGGACAATGTGAAGGCTCCCTCGACGACGGAGCAAGAGGTGCGTCACTTTAACTTTGACAACATGAACAACTTCAGCTTCAAGGACGCCTCAGTTCCACTTCATGTCGATACGCCCAACGGAGATGCCGACGCGGAGGCAGTGGCCGAGGGAGGCGGGTCGACACCACCGAATTCCACATCGTCGGCCAAATCAAAGTTCCTGCGCCCCACCAGCTTGCCCTTGAAGCCGGGCACCTTTACGCCGAAGCGTCACCATGGAATCACACCCACAGCTAATACTCTGCCCTTGATCTCGCCGGAGACACCGCGTCCTTCGAAGTCGTGCGTGCAGCTCTACCTCAATGGCCACGCCTACACCTATCTGGGCCTCAAATGCAGCACCAAGATGTTCTACTGCACCGTCAACTGTCCGCAGCCCTCTTATGTGGCCGGAATGCACAAACTGTCCATGTACAGCGTGTGGCAGGTGTGCGAGGAGAACCAGCCGCATCCGCTGGGCTTCAAACCCAAGCAGGTGATGTCTCTGTACGACTCCCGCCAGAAGATGCTGGGCAGCGGAAGCGGCAGCTACACATCCATAGCCGGCATGAGCCGCGGAGAGCTGGACTTCGCTTTGGTTACCTCGCAGCAGACAGTGTGCTCCAGCTCCACCATGCCCAGGCATGGCCACGGCAAGTTCTATCAGCACCAACCAGTAAAGGCGACTTCTGTTTCCGCAGCAGCTCCCGTCGCAGGCGTTGCCGCTTTGAGTGAGGCGAATGTGGCAGCCAAGGCCAACGAGgaggcagcagctgcagcagcagctggcaagAAACTGGAGGCCTCAACGGGACAGCAGCTGTTGGTCGGAGGCTACGAATCCCACGAGGATTACACCTACATCCGCGGACGAGGACGCGGCCGCTACGTGTGCTCCGAGTGCGGAATTCGCTGCAAGAAACCGTCGATGCTCAAGAAGCACATTCGCACCCACACGGATGTGCGCCCATTCACCTGCAGCCACTGCAACTTCAGCTTCAAGACCAAAGGCAATCTCACCAAGCACATGCAATCGAAGACCCACTTCAAGAAGTGCATTGAGTTGGGCATCAATCCGGGTCCCATGCCCGCCGACGGGGAGTTCCTTGATGTCGATGTGGACTTTGATCAACAGTCATCGACCTCCGCCGGCGGACGCACCTCCTCTATGGCGGGCGAATCCGATTCAGATGACTTCAGTGATAATGAATCGGAGAGCAGTGACACAGATGAGTCCAAATCACGTTTAAAGGAGCATGAGGCTGCGCGTTGCCTGCTCTCTCTATCCATGACACCGCCCATTCCTCAGAGTGTATCGCCGTATCCGCAGTTGCACGATGCACCAGCTCCGGCCGCCAGTCCGGCGAATAGCATCGGCTCCTCAGTTGGCAGCAGTGCTGCCGGCTCCCAGCCCAAGCGCCTGGTCTGCTCGTTCACTTCGCCGAAGCCGCCGTTCGACTATCAGAAGCAGGAACAGTATTACTCCAACCCGGAGGAGTCCAAGCCCAAGCGTAGCGTTGCCAGCGATGAGAGCGCCCCCATGGACTTAACTAAGCCGCGAAATTCGCATTCCACCATCTCCACAGCGCAGCCCAGCCCCACTCCAACTGCCACTGGCCATATGATGGCCCATCTCAGTGCGGAGCTGCCCAAATCGCAGGCCCAGCAGATGAGAGATGTGATCTTTGGCAGCGCTGGCAACGAGTGCGGCTTCATGAAGACTGTGATCTCTGTGTCGGACAAGGTGCGCATCTCTGCCGAAATGGAGGAACAGGCCAAGCACGCGGCGGAAGGCGAGGATGTTCTGTTTCAGACCTATATCAAAGAACAGGCTCTGCAGCACGCCAAGATGAAGCAGAGCCAGTTCAGTCGCAGCTACCTGGTTACCAGCAACACTACCAGCATTACTAGTGCGAGCTCCTCTCCCATTACTCCCATTAAGAACAGCAGACCAGCAATGGTCATCACCGAGCTGCCCAGCATTGAGGTTAGCGAAGTGAAGACCCCTGAGCCCGTCGCAGTAGAAGCGCCGCCAGCAGTCTCTTCAGTCCCGGAAGCACCATCGACAGCAGTAATTGTCAAGGCACCCGAGGAAAGTGAAGAGCCAGAGCTGCACTCGGATCAGGAGAAGCCCACTGTTACCGTTTCCGAGCCGCATAATGCTAATCTGCCCGCTGCAGTGCAGCAACCAGATGCTACTGACTTCAGCGGTGTCCTCAGCCAGGCGAATTGTAGTTCAAATTCCTCTCCAACCGCAGCTCCAGCACGGAATGTGATAGTGGGTGATGATGGCTTTAAGACATCCACTGCCTCCGCGTCGACTACCTCGAACAGCAAGAGCGCGGATCCTCAGCCCGTAGGCGGGTATCCACGCGGTGTTCCGCCCCCTCCCATTGCCGGAGATGCGCGTCCCACGTGCAGCATCTGCTCCAAGACGTTCCAGCGCCAGCACCAACTCACCCTCCACATGAACATCCACTACATGGAGCGAAAGTTTAAGTGCGAGCCGTGCAGCATCTCGTTCCGCACCCAGGGCCATCTGCAGAAGCACGAGCGTAGCGAGGCCCATAAGAACAAGGTGATGATGACTTCAACCTTTGGTGTTCCCACCACCTCAAATCCGCGGCCATTCGAATGCACCGACTGCAAGATTGCTTTTCGCATCCATGGCCATCTGGCCAAACATCTGCGCTCCAAGACCCACGTCCAGAAGCTGGAGTGTCTGCAAAAGTTACCATTTGGTACATATGCGGAGATTGAACGCGCCGGGATTAGCCTAACAGAGATCGATACCAGCGACTGCGAGAATTCGCTCACCTCGCTCAAGCTGTTGGCCCAGAAGCTGCTGGAGAAGGATCCGAACAAGCTAAACGACTATACCACTCCCTCGGGTATGCTGCAGCTGGCCCAGGACGCACCCACCTCCCAGGATAGCGCCTCCGAAGATGGCTTCAGTGCGGCTAACAGTGCGGCCGCCTCTGCCATCGCCTCTCTAGACAATGACAGTGCTGGCAACACCCCACAACGAGCCAGCTCCATGTCGGAGGACGAAACTGTGGCCAATGGGCTGACCCTAACTCACAACCTGAAGCGACGCCTGCCAGGCAGCTTCAGCAGCAATGGGGAAGAGAGTGATAATCCTCAGGATGGAAGCGCCACAGGCAGCGAAAAACGCGCCCGATCCAATGAACAGTTGGTGCTCAATCCAGTAGCTGCCTCGGCGGCTGCCAGCAACTGA
Protein Sequence
MEDATTTQSKHYKTTAKQHKNNKVTNNTRRATATSTAAAAATAATTTTTKKQTYREPATTTTTTSNTAATNTTTTQKPTNNSNNNKVNNKSATTAAAVTSISAAVADVTNNKPSTSPRSKLNELQPAAKIVDSKITNSSNSTNSSIIINNKNNHSDNSISEDNYEFKARDNTNLSDSKMTLQHVASAASVAAATKEPSQGSNNSSMAATTAVVADGDWVNNSRYLHKKFKRLASTTDPDGISSGGSSSGGSASLGDPTRTTSLSSNSSLSPPPPAVAGPAPTPLLNGHHPQQQQQRELPRQPTENSANFLNNNHANEESKGIALTGPRSRTPLSSSIGNYVANATLSPATFAQHQQQTQPTTPTIQTPTAIATTVVGGEKPGRYICPYCNMPCAKPSVLQKHIRAHTNERPYPCETCGIAFKTKSNLYKHCRSRSHTARVRGLEVPDDADEGLSDQDVDAELSNSSSEMLSRPGSPYEEPTPSPTPSPSTLSASKSAYLQQPPLPQHIQQLPLGSPAAGTLPPAPATTDILLSATAQHRQSIEFKPYKPKFHNASLYAPGSSKEQQQQLQQAQHQQQQLAVQHQQQQKLTLQPLVQQTHPAHPTHPTLSPSTQMKLNNHINSHQLQLQFQQQQHQQHHLHAQQSLLLTASPGALAAIPSTGVYYLGQPPYYNSAVALAGMHQHALAYQQQLQLQQHLQMQQQQQHSPMLKALPQAQPQSLPQPPPPSHPTQQLTRSNSQAANVGAPAAPSLADPVTTTSSSNLSSFASGKQVNREMLQERISNIISRNEAIVENKEILLQKKYPKQFNRSRSFNNANNNSSNSNASASLASNSQLGGIASSSERETKVNLAQAIVQKQQQQQQQQQQQLQLQHQQYQMYLQQQQQQQHLQQQQPQQLEPPNGLMKRSNSYKSAPLTPAPTPPVKQQLPPPPSPLPMQTLQYRQDPATPVPKLELQAAPGHVMPLNLSAKPKPATAMPSTSAVPVSSTPTPAAASAAPAPSAKMGFPASTNNSIIKNLLLNARGLAVPIGEGDDAVYSCPICASVFRSADELKQHNSTYCQDASSSAPMSPASSPSSKYFRSNSISLSLPELKTHMANSKNPLSLAKLAFYQLKTKPSSLVLSRLSAAQSPARTSTVTATSSAPAANSSSTSSASAATSPASAAPTAAVESLRFVDAPLPSPGPLLGKTPLVDYAQQSAPRKPQDAQVVITKMHEDRQFMDVEAQHSMPAKRLKISENAGPAAPTSFTFPPEKMLFGNNQSQELQYSKEERLRRFTSSGGTMIPISECPDLDKSPKMIRTPLLSGGSFQEVSPKISESAKDRKQPPGHASFLLNAGSAPQHFQFPPINSITAFNPLTLPPMGGGDKVATIATPIPYVPGIPGPGSLTPQVPLLLPPPQQLQLPTPGARGRSPNRKQPSPGELKALSPFGGVQNVPSEFSRQPPTPAQRNAMQWNSNSNKLESSKKVPFNFLRMADNVKAPSTTEQEVRHFNFDNMNNFSFKDASVPLHVDTPNGDADAEAVAEGGGSTPPNSTSSAKSKFLRPTSLPLKPGTFTPKRHHGITPTANTLPLISPETPRPSKSCVQLYLNGHAYTYLGLKCSTKMFYCTVNCPQPSYVAGMHKLSMYSVWQVCEENQPHPLGFKPKQVMSLYDSRQKMLGSGSGSYTSIAGMSRGELDFALVTSQQTVCSSSTMPRHGHGKFYQHQPVKATSVSAAAPVAGVAALSEANVAAKANEEAAAAAAAGKKLEASTGQQLLVGGYESHEDYTYIRGRGRGRYVCSECGIRCKKPSMLKKHIRTHTDVRPFTCSHCNFSFKTKGNLTKHMQSKTHFKKCIELGINPGPMPADGEFLDVDVDFDQQSSTSAGGRTSSMAGESDSDDFSDNESESSDTDESKSRLKEHEAARCLLSLSMTPPIPQSVSPYPQLHDAPAPAASPANSIGSSVGSSAAGSQPKRLVCSFTSPKPPFDYQKQEQYYSNPEESKPKRSVASDESAPMDLTKPRNSHSTISTAQPSPTPTATGHMMAHLSAELPKSQAQQMRDVIFGSAGNECGFMKTVISVSDKVRISAEMEEQAKHAAEGEDVLFQTYIKEQALQHAKMKQSQFSRSYLVTSNTTSITSASSSPITPIKNSRPAMVITELPSIEVSEVKTPEPVAVEAPPAVSSVPEAPSTAVIVKAPEESEEPELHSDQEKPTVTVSEPHNANLPAAVQQPDATDFSGVLSQANCSSNSSPTAAPARNVIVGDDGFKTSTASASTTSNSKSADPQPVGGYPRGVPPPPIAGDARPTCSICSKTFQRQHQLTLHMNIHYMERKFKCEPCSISFRTQGHLQKHERSEAHKNKVMMTSTFGVPTTSNPRPFECTDCKIAFRIHGHLAKHLRSKTHVQKLECLQKLPFGTYAEIERAGISLTEIDTSDCENSLTSLKLLAQKLLEKDPNKLNDYTTPSGMLQLAQDAPTSQDSASEDGFSAANSAAASAIASLDNDSAGNTPQRASSMSEDETVANGLTLTHNLKRRLPGSFSSNGEESDNPQDGSATGSEKRARSNEQLVLNPVAASAAASN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-