Basic Information

Insect: Hirtodrosophila duncani
Gene Symbol: ken1
Assembly: GCA_037043425.1
Location: JBAMBM010000601.1:31937-34105[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0041 0.26 12.0 8.9 1 23 235 257 235 257 0.97

2 12 0.001 0.063 13.9 0.4 1 23 263 288 263 288 0.95

3 12 0.03 1.9 9.3 0.4 1 23 295 320 295 320 0.91

4 12 0.0012 0.076 13.7 2.8 1 23 329 351 329 351 0.95

5 12 4.6e-06 0.00029 21.3 0.4 3 23 360 380 358 380 0.98

6 12 0.02 1.3 9.8 0.5 1 23 386 408 386 408 0.97

7 12 0.0065 0.41 11.4 1.7 1 23 414 437 414 437 0.98

8 12 0.0073 0.46 11.2 2.7 1 23 443 465 443 465 0.96

9 12 0.00069 0.043 14.4 0.5 1 23 471 493 471 493 0.97

10 12 0.0014 0.089 13.4 3.8 1 23 556 579 556 579 0.95

11 12 0.0032 0.2 12.3 6.0 1 23 585 607 585 607 0.95

12 12 0.0087 0.55 11.0 6.3 1 23 613 635 613 635 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0041	0.26	12.0	8.9	1	23	235	257	235	257	0.97
2	12	0.001	0.063	13.9	0.4	1	23	263	288	263	288	0.95
3	12	0.03	1.9	9.3	0.4	1	23	295	320	295	320	0.91
4	12	0.0012	0.076	13.7	2.8	1	23	329	351	329	351	0.95
5	12	4.6e-06	0.00029	21.3	0.4	3	23	360	380	358	380	0.98
6	12	0.02	1.3	9.8	0.5	1	23	386	408	386	408	0.97
7	12	0.0065	0.41	11.4	1.7	1	23	414	437	414	437	0.98
8	12	0.0073	0.46	11.2	2.7	1	23	443	465	443	465	0.96
9	12	0.00069	0.043	14.4	0.5	1	23	471	493	471	493	0.97
10	12	0.0014	0.089	13.4	3.8	1	23	556	579	556	579	0.95
11	12	0.0032	0.2	12.3	6.0	1	23	585	607	585	607	0.95
12	12	0.0087	0.55	11.0	6.3	1	23	613	635	613	635	0.97

Sequence Information

Coding Sequence: atgAATTTTGCGAGTGGTCAGGACACCATACACTCTGTATGTCGGATCTGCTTAAACCACCTGCAGGTTGATGCGACGGTCTACGATCTATTTATGGTTCCAGAACTGGTCAAGAAGCTGTGCGTTTGTACGTCCTTGTCCGTGGAACAACATGATGGATTTCCCAGGAATCTGTGCAGTAATTGCTATAGTCGACTCGATGATTTGCATGAGTTTCAAAAGCTATGCGTGGAGTCGGTGCAAAAATTCCAGGAGATGTTGGCCAACAATTTCTTTGTCAGCGAAGAGTTGGTGGGCAATGATGAGGAAAACAACTTTGATCCGCTGCTGAATCACAAAATGGAACATATTGATAATGAGGATGTATTTAAGATGTTAGAGCATATGGACAAGGTAGCCGGGAAGCAGGTGGAAGACGAAGGATTACCTGGCCCCATTATGGACATGCATGCAGTGGAAGCATCCCATGAGAGTGGCgatgaaatatatacaagcaaCAGCGATGATGATATTCCCCTGGCCCATCGAGGCATGAAAAGCAAGACCACGAGGAAGCCCAAacccaagaagaagaagaaggctaaTGAAGAACTCTCTAATTCGTCATCCTCTGACGATGACGAGGTTGAAGCTGAAAAACTGCCCAAGGAGAAGCCTAAACGCAAGCGCATCCCGGCCCACGAGCGTCATCTGCATCGCACCTTCGATTGCCACATTTGTCACCAGAAATTCAAAAAGGCAAGCTGCTATCAGGAGCACATGAAGCAACACAGCGATCAACTGCCATTTCAGTGTAAGGTGGAGGGCTGCCGAACGGGTTTCACCACTGCCACTGGACTGCGCATTCACATGGAGCACGCTCACACAGATCCCTCTGATATGCACGCCTGTACTGTAGAAGGGTGCGGCAAATCCTTCGCTCGTATTGGTGTGCTGTATTTCCACATGAGAAGGATGCACAACATGGAGACGCCATTAAGAGAGTTTCCCTGCACGGACTGTGACAAGGTCTTCCGCTGTCCCACTGCGCTCAAGAAGCACTCGTACAAGCATACTGGCGAGGAGTTGCCTTTTGGCTGTGAGATTTGCAATAAACGCTTTCCCACGAACAGTGCTCTACGGGATCATCTTATGCGGCATGCGGGCGTAAAGAATCACGTATGTCCGTACTGCGGAGTGGGCAAGACGACGCGGCAGGAGTGGAGCAAACACATCTTGACCCACACTAAGGAGAAAATATTCAAGTGTCGCGAATGCGATCATGCGTCGCACAACAAACAGGCTCTGGCCAATCACGTCAGGGTGGTGCACATGAAGATCAAGGACTACGCCTGCCAATACTGCGGGAAGACGTTTGGAAAGTCATTCGCCTGCAAGATCCACGAACGCAGCCACACGGGCGAAAATAATTTCGATTGCAAATTATGTGGCAAGGTGTTCCTCTTCGAAAAGGCTTTGACCAACCACTTGAAGGTTCACGAAAAGCGAGATCTGGCAACAGCGGCAAAGGCGAAGGCAGCGgaaacaaagccaaagagcTTACATACTGGACGATTGGAAGTTGTAGACATCTCGCAGCTGGCAGGCACCAATGTCAATCCCATACAATCTGTCGACTTGCCCTCGTGGCCGCCCCATGTAAACTTCACGAAAAAGGAGGGCCAACATATATGCCCAAATTGCGGCAGAGGTTTTAACCACTTTGGCAATATGAAGCTCCATCACAAAATCGTTCACCTGAAGATAAAGGACTTTGTCTGCCGATTCTGCGACAAGCGCTTTGGCAAGAAACATCATCTTCAAAATCACGAGTACATCCATACCGGCGAGAAGCCATTTGAGTGCAAAATCTGTGGCAAGCATTTCCGGACGGATAAGGCATGCAAAACGCATTTAAAGTCACATAATAAACCTCCGACGCCGTCCAAGCCACTAGCCAAGCCGAAAGAGCCAGCGGTTCAAAAAGCCGAAAGAAAACGTGATATGCCCAAGAACTTTGAGCAGTACCAGGATCCGGTGGTCGAGCGCGCTGCTGCCACAGCTGAACTGCTTGCATTTCAGATTGAGGAGAGTGAGGCGAAGCGGAAGGCCGAAATCGAACTACGCAAGGTACAGGAGGCTGCCTATGAACAGCTACGCAAGCTGCAAAATCGACTCAGCAGAGTATAA
Protein Sequence: MNFASGQDTIHSVCRICLNHLQVDATVYDLFMVPELVKKLCVCTSLSVEQHDGFPRNLCSNCYSRLDDLHEFQKLCVESVQKFQEMLANNFFVSEELVGNDEENNFDPLLNHKMEHIDNEDVFKMLEHMDKVAGKQVEDEGLPGPIMDMHAVEASHESGDEIYTSNSDDDIPLAHRGMKSKTTRKPKPKKKKKANEELSNSSSSDDDEVEAEKLPKEKPKRKRIPAHERHLHRTFDCHICHQKFKKASCYQEHMKQHSDQLPFQCKVEGCRTGFTTATGLRIHMEHAHTDPSDMHACTVEGCGKSFARIGVLYFHMRRMHNMETPLREFPCTDCDKVFRCPTALKKHSYKHTGEELPFGCEICNKRFPTNSALRDHLMRHAGVKNHVCPYCGVGKTTRQEWSKHILTHTKEKIFKCRECDHASHNKQALANHVRVVHMKIKDYACQYCGKTFGKSFACKIHERSHTGENNFDCKLCGKVFLFEKALTNHLKVHEKRDLATAAKAKAAETKPKSLHTGRLEVVDISQLAGTNVNPIQSVDLPSWPPHVNFTKKEGQHICPNCGRGFNHFGNMKLHHKIVHLKIKDFVCRFCDKRFGKKHHLQNHEYIHTGEKPFECKICGKHFRTDKACKTHLKSHNKPPTPSKPLAKPKEPAVQKAERKRDMPKNFEQYQDPVVERAAATAELLAFQIEESEAKRKAEIELRKVQEAAYEQLRKLQNRLSRV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00804626;
90% Identity: -
80% Identity: -