Basic Information

Insect: Hirtodrosophila duncani
Gene Symbol: ken1
Assembly: GCA_037043425.1
Location: JBAMBM010000601.1:19923-22160[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.024 1.5 9.6 3.9 2 23 231 252 230 252 0.97

2 12 0.00089 0.055 14.1 0.1 1 23 258 283 258 283 0.93

3 12 0.025 1.6 9.5 0.1 3 23 292 315 290 315 0.93

4 12 0.00077 0.048 14.3 0.8 2 23 328 349 327 349 0.96

5 12 1.3e-05 0.00082 19.9 0.6 1 23 356 378 356 378 0.98

6 12 0.0028 0.18 12.5 0.1 1 23 384 406 384 406 0.98

7 12 0.0057 0.36 11.5 2.5 1 23 412 435 412 435 0.97

8 12 0.014 0.88 10.3 4.0 1 23 441 463 441 463 0.96

9 12 0.0008 0.05 14.2 3.7 2 23 470 491 469 491 0.96

10 12 0.0003 0.019 15.6 1.7 3 23 584 605 582 605 0.95

11 12 0.0041 0.26 12.0 1.1 1 19 611 629 611 633 0.95

12 12 1.7e-06 0.00011 22.7 0.4 1 23 639 661 639 661 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.024	1.5	9.6	3.9	2	23	231	252	230	252	0.97
2	12	0.00089	0.055	14.1	0.1	1	23	258	283	258	283	0.93
3	12	0.025	1.6	9.5	0.1	3	23	292	315	290	315	0.93
4	12	0.00077	0.048	14.3	0.8	2	23	328	349	327	349	0.96
5	12	1.3e-05	0.00082	19.9	0.6	1	23	356	378	356	378	0.98
6	12	0.0028	0.18	12.5	0.1	1	23	384	406	384	406	0.98
7	12	0.0057	0.36	11.5	2.5	1	23	412	435	412	435	0.97
8	12	0.014	0.88	10.3	4.0	1	23	441	463	441	463	0.96
9	12	0.0008	0.05	14.2	3.7	2	23	470	491	469	491	0.96
10	12	0.0003	0.019	15.6	1.7	3	23	584	605	582	605	0.95
11	12	0.0041	0.26	12.0	1.1	1	19	611	629	611	633	0.95
12	12	1.7e-06	0.00011	22.7	0.4	1	23	639	661	639	661	0.98

Sequence Information

Coding Sequence: ATGAGCACAAGTGAATCGCCGTACTCTGTTCATTCAATATGTCGAATTTGCCTGCTACGTGTGCAGGAGAGTACCGGGTACGACCTGTTTGTGATGCCGGATTTGGCGAAGAAACTCTCTATGTGCACCTCATTGGTAGTAGAAATTCAGGATGGCTTTCCTCGCTGCATATGTCCCGGCTGCTATGGCAAATTAAATGATCTGCAtgatttccaaaaattttgtGTGGCCTCTGTAGAACGGTTTAAGGAGATGGTGGCCACCAACAGAATTAGAATTGAGAGTCGTACAAGTTCTGGATCCTCTTCCAGTACAAAGGCGCTCTTCGAtcccatatccatatccagcAACGAGCCTGATTTGGACCTATTGGCAAAAGAAGAGCAGGTTAGTTATGATCCGCTGCAGAATCACAAAATGGAGTTGCTTGAAAATGAGGATGATGtcttcaaaatgttgaaaagcGTGGACAAGGAGGCCAAACAGGAAATGCAGGAGGTTCACAAGAGAATATTTAGCGACTGCTCTGAGCAGGAGGACAGTGTCAGTTATGATGATATGCCACTAGCTCATCGATTGGACTTGGATGCGGGAGAGATCACCAACTCGTCAGTTGAAGAGCCGACTGTaaggcaaaaaccaaaaagaaagcGTATTCCACCAGCTGAGCGCCACTTGCATCGCATCATCACCTGTCAGGTCTGTCAGCAGAAATTCAAGAAGCAATTGAAATACGAGGAGCACATGAAGCACCACAACGATCTGCTGCCCTTCCAGTGCACAGTGGACAACTGTAAGAAGGGCTTCACCACGGCGGGTGCACTACGTCTGCACGTGGATTATGCGCACACCAAATCTGCGAAGGAAATTCCCTGCACCGTTGACGGATGCCAATTTATGTTCCCCCGCGTGCGTCTGCTCACCATTCACTTGAAGAAGGTCCATAACCTGAGCCGGCCCTCAGCGCCGCGTGTGGAGCAGCCGTGCCAGGAATGTGGCATGGTATTCCGCTGCCCGGTGGCCCTCAAGAAGCATATGTACAAGCACACCGGTGAAGAGCTGCCCTACCCGTGCAACATCTGCGGCAAGGGATTCCACATAAATAGCGCCCTGAAGAATCATCTCTTGCGACATGCGGGCATCAAGAACTATGTGTGTCCCTACTGTGGCGTGGGCAAGACGACACGGCAGGAGTGGACTAAGCACATACTCACCCACACCCAGGAGAAGCAGTTTAAGTGCCAAATCTGTAATCATGCCACACATACGAAGCGAGCCCTGGAGAGCCATGTAAAAATCGTGCACGAGAAGATCAGAGACTTCGCCTGCCAGTACTGCGGCAAGACGTTTGGCAAGTCGCATGCCTGCAAGATTCACGAGATGACCCACACCGGCGAGAAGCGCTGCGAGTGCAAAGTGTGTGGCAAGAAGTTCCTTTACACTGAGAGTCTCACCAAGCATCTGAAAACGCACGAGAAAAGCGTGGAGCGCGCCATCGAAACCTATCGTAAGCGGCAGGGTGCCAGTGCAAGTGAATCCTGCGGCAAGGACAATGGAAATGTTGCAGATCAACTCCTCAAGGTCTGTGCCGAATCGGTGGCAACCATTCCAAGGGATCCGCGACGAGTGGAACTAGTTGACATGGCCCAATTGGCCGGAACCGTAGTGAATCCGATTCCATCCGTCTCATTGCCACCCTCAATAGCTCCGTCGCAGGTGAAGTTCGTGCAAAAGGAAGGTATGCATCTGTGTCCCAATTGCAATCAGGGATTCAACAATCTGGGCAACATGAAGCGCCACTACAAGAGTGTACACGAAAAGGTGAAGGACTTTGAGTGCCGTTTCTGTTCCCGTCGCTTTGCCAATTCGCAGTCCCTGAAGCAGCACGAGTGGATCCACACGGGTGAGAAGCCTTACGAATGCAAGACGTGCGGCACGAATTTTCGACAGGAAGCGGCTCTCATACGACACCAGAAAGTTCATGACGAGAAACCACCCAGACCCCTAAAATCGACAAAAGAAATAACTGAGAAGTCGCGACTTAAACAAATCCAAAAGATTGAGCGGCGGCGGAAAGTGGCCGCACTACGACAGGAAATTGCCGAAGTGGCCAAGGAGAACCTGAAGGACTTGGCCAAACAGCGCGAGTTGGAAAAGCAATGCAACACCTATGAGCAATATCAGGCGGCGAAGGCAGCCACAGAAGCAGAGCCAAGGCCAACCCTGGCGGCCCAGTGA
Protein Sequence: MSTSESPYSVHSICRICLLRVQESTGYDLFVMPDLAKKLSMCTSLVVEIQDGFPRCICPGCYGKLNDLHDFQKFCVASVERFKEMVATNRIRIESRTSSGSSSSTKALFDPISISSNEPDLDLLAKEEQVSYDPLQNHKMELLENEDDVFKMLKSVDKEAKQEMQEVHKRIFSDCSEQEDSVSYDDMPLAHRLDLDAGEITNSSVEEPTVRQKPKRKRIPPAERHLHRIITCQVCQQKFKKQLKYEEHMKHHNDLLPFQCTVDNCKKGFTTAGALRLHVDYAHTKSAKEIPCTVDGCQFMFPRVRLLTIHLKKVHNLSRPSAPRVEQPCQECGMVFRCPVALKKHMYKHTGEELPYPCNICGKGFHINSALKNHLLRHAGIKNYVCPYCGVGKTTRQEWTKHILTHTQEKQFKCQICNHATHTKRALESHVKIVHEKIRDFACQYCGKTFGKSHACKIHEMTHTGEKRCECKVCGKKFLYTESLTKHLKTHEKSVERAIETYRKRQGASASESCGKDNGNVADQLLKVCAESVATIPRDPRRVELVDMAQLAGTVVNPIPSVSLPPSIAPSQVKFVQKEGMHLCPNCNQGFNNLGNMKRHYKSVHEKVKDFECRFCSRRFANSQSLKQHEWIHTGEKPYECKTCGTNFRQEAALIRHQKVHDEKPPRPLKSTKEITEKSRLKQIQKIERRRKVAALRQEIAEVAKENLKDLAKQRELEKQCNTYEQYQAAKAATEAEPRPTLAAQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -