Hdun000596.1
Basic Information
- Insect
- Hirtodrosophila duncani
- Gene Symbol
- bab2
- Assembly
- GCA_037043425.1
- Location
- JBAMBM010000030.1:1676781-1679057[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.4e-09 2.8e-06 27.1 0.0 1 44 430 473 430 474 0.91
Sequence Information
- Coding Sequence
- ATGGGAGGGCCCAGTGGGCCGGTGGCCAGCAGCGAGGGTCAGACATATTGCCTGAGATGGAACAACCATCAGACGAATCTGGTGCAGATACTACATGCGCTGCATGAGGTTGGCAGCTATGTGGACTGCACCCTGGTCGTCGACGATGAGCAGTTCAAGGCACATCGCGTCATCCTGGCAGCCAACTCGCCCTACTTTCAAGCCATACTGCAGGATGTGCCGCAGGATCAGTGCAGCATCATATTGCCGGGCGTCAAGGGCTTCGAAATAGCCGCTCTACTGCAGTATATGTACACGGGTGAGACGACAGTGACCAAGAGCCAGGAGCCCGAAATACTGCGCACTGCCAAGGAGCTGCAGGTAAAGGGCCTCTACGACAACCTCATGAAATTCAACCACAAGAGCTCCGCTGCCGTCACAGCTGCGGAGGAGCGCTTGCACAGCCAGTACCCAGCACATGGTCATGGCCACGGACATGCGCCCATCTCAAGCTCAAGTTCCTGCGCAATCAAGCAACCACCCAATGGCGCTGCCGGCGATGTCTATCATCATCACAACTCCACATCCACGTCAGTGATCTCAACATCCACTCACATCTCGCCCAGCGCGGCCATCTCGAGCAGCTGCTCGTCCCCGCCGCCACCCTTTGGCGCCACTGGCTATCCGCACGGACACACGAACTTCACAGCCGCCTCTGGACCCTTGCAACCTCATTCACACAGCCATTCCCATTCGCATACACATTTGCCAGCTGGTGAAGCTCCGCTGACGCCCACTCATGGTACACCACATGGTGCATCTGGCGAAACTGCGCAGTGGCCGCTTTCCCCCTCCgcctcagcagcagcggccgcCGCTATGCTAAACTCAGTGTATGAATCGGCAGCAGACATGAATCCTCTGAAGCGCAAGAAGCTGTCGGCCATATCGAGCATGCTGCTTAACAGTACCCGGGATACGCCCATTTTGCGCAATGTGCTCGCCCAGACCAATGCCAACCCGGCCGACTCTTCGCAACCGCAGCCAAATCTCAATCCCAATCCCTTGCTGTTGCCCGGCATCAAAGTCAACTCGAGTGCCTCATCCTTGGAGAAGACGCCCagccaccagcagcatcagcaccagcagcaacagcaggtaCATCACCAGTCAGGCAGCTTTAATGGCTCTGACTATGGCGGCGACAAGGAGCCCCTTTCGCCACACACAGATCGCTCCTTCGACGATGAGAGCGGTGGGGGCGCGGGGAGCGGAAAGAAGCCGGAATGGAAGCGCTATAAGCAGTACACCCGAGCGGACATGATGTGTGCCATCCAGTGCGTGCGCGAAGGTATGAGTGCGCTCCAGGCCAGCCGCAAGTTCAATCTGCCCAGCCGCACACTCTACGACAAGGTGCGCAAGCTGAACATCACCACCGGCCGCGGTACTCATCGCACGCCCAAGCGCAGTCCCCCAGGCGGCGGTaacggcggcggtggcggtgctTTGAGCATGGAATCCTCGGCCGCCTTTCCTTATtctgcagcggcggcggctgcagccgctgctgcagcagctcacAACTACGGCGAGCGGGAACGTGAGCTGGACAGAGAACGAGAGCTGAAGCCAGAGCATGGACATCGTCACCATCATGGAACACATTTGCCACCTACCATACCCCACTCAGCTGCTGCGCTGCTGGATCACGCCTTCCTGCAGCAGGCTCTGGAGAATCGAGGCGCAGGCGCCGCTGGCGGCGATATGGCTGGTCGTGAGGCGCTACATGCCATGGCGCTGGCCGCGGCTGCGCATGCGGCCGCTAATCGCATGTccagcagtagcaacagccCGCCCGGCTCCAATGGTCATGCCCAAACTATGCGCACGCCCAGTCCCAGTCTCAGTCCAAAGCAGCACGAGCGCCTGATCAAGCACGAGGAAATGGACTTGGAAATGGACATGGAGCCTGAGCAGCGCGAAGACGATGCagatgctgatgatgaggatgatcaTGTGGAGGATCTGTCGCTGGCGCGCAAAGGACGACCAGAGTCGCCCTACACGCCACCACCAGCCAGGATGGCAGCCTCACCCATGGAAAGTGCCAGCGTCATAATGCACGCCAATGCCGCTTCCGCCACGACCGCAGCCAATGGCAGCAAAGAGCTGGAGCATGAGAACGAACGCATGCAGGAGGATTATGATGCAGGGGCTGGCGGTGTGGCCCATCGATTGGGTCTCAAGCGCGAGCTGCTTAGTGGCGAAGAGACGCAGGCGCAGGAGCGCAATGACTGA
- Protein Sequence
- MGGPSGPVASSEGQTYCLRWNNHQTNLVQILHALHEVGSYVDCTLVVDDEQFKAHRVILAANSPYFQAILQDVPQDQCSIILPGVKGFEIAALLQYMYTGETTVTKSQEPEILRTAKELQVKGLYDNLMKFNHKSSAAVTAAEERLHSQYPAHGHGHGHAPISSSSSCAIKQPPNGAAGDVYHHHNSTSTSVISTSTHISPSAAISSSCSSPPPPFGATGYPHGHTNFTAASGPLQPHSHSHSHSHTHLPAGEAPLTPTHGTPHGASGETAQWPLSPSASAAAAAAMLNSVYESAADMNPLKRKKLSAISSMLLNSTRDTPILRNVLAQTNANPADSSQPQPNLNPNPLLLPGIKVNSSASSLEKTPSHQQHQHQQQQQVHHQSGSFNGSDYGGDKEPLSPHTDRSFDDESGGGAGSGKKPEWKRYKQYTRADMMCAIQCVREGMSALQASRKFNLPSRTLYDKVRKLNITTGRGTHRTPKRSPPGGGNGGGGGALSMESSAAFPYSAAAAAAAAAAAAHNYGERERELDRERELKPEHGHRHHHGTHLPPTIPHSAAALLDHAFLQQALENRGAGAAGGDMAGREALHAMALAAAAHAAANRMSSSSNSPPGSNGHAQTMRTPSPSLSPKQHERLIKHEEMDLEMDMEPEQREDDADADDEDDHVEDLSLARKGRPESPYTPPPARMAASPMESASVIMHANAASATTAANGSKELEHENERMQEDYDAGAGGVAHRLGLKRELLSGEETQAQERND
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00804475;
- 90% Identity
- iTF_00804475;
- 80% Identity
- iTF_00804475;