Hdun017762.1
Basic Information
- Insect
- Hirtodrosophila duncani
- Gene Symbol
- bab1
- Assembly
- GCA_037043425.1
- Location
- JBAMBM010000834.1:4722662-4724303[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.8e-18 2e-14 53.2 0.0 1 43 55 98 55 100 0.95 2 2 2.7 5.5e+03 -2.7 0.3 6 12 224 230 217 233 0.61
Sequence Information
- Coding Sequence
- ATGATGGAGAACTCGCACGCTTGGATGGGCGCCACCGGTTCGACGCTGGCAGCAGACAGCTATCAGTATCAGTTGCAGTCCATGTGGCAAAAGTGCTGGAACACCAATCAAAATCTCATGCATCATATGCGCTTCCGCGAGCGAGGACCGCTCAAGTCCTGGCGACCCGAGACCATGGCCGAGGCCATCTTCAGTGTGCTAAAGGAGGGACTCTCTTTGTCGCAGGCGGCGCGCAAATATGACATACCATATCCCACATTTGTGCTATATGCGAATCGAGTGCACAATATGCTTGGACCCTCCATAGATGGTGGACCCGATTTGCGGCCCAAGGGACGTGGACGACCGCAGCGAATACTGCTGGGCATTTGGCCGGATGAGCACATTAAGGGCGTCATCAAGACAGTGGTTTTTCGCGATGCCAAGGACATAAAAGACGACAGCCTAGGGTCCCATATGCCACCATACGGTCGTCATTCGCCCGTGTTTCCTTTGCAGGACATGACGCTGAGCTATCCAGGCGCTAGTGGCGCCATGCCCGGTAGCGGCCTCAGCGCTCTGGCCTGTCCTAATGGCATGGGCAGCGGTGGTGGAGGAGGTGGCGCTGGAGGTGTGGGCTCTGGTGCTCCTGGCGGTGGCGTGGCGGATCAGCAAATGTCGCAGGagacggctgctgctgtggcagcCGTAGCACACAACATACGGCAGCAGATGCAAATGGCCGCTGCAGTGCAGCATCAGCACAGCGAGGCGGGGCCGCCGCCCGGGCTGTTCAACTTGCCACCACATTTGACTGGGGGACCGGGACGTGGTAGTATATCACCGGCGCTGAGCAGCGGCTCGGGACCAAGACATGCTCCCTCGCCCTGCGGCCCCGCTGGCCTGTTGCCGAATCTGCCTCCTAGCATGGCCGTTGCACTGCATCGGGATCATctccagcagctgcagctccagcagcagcacgctctgcatcagcagcagcagcagcaacagcaacagcagcagcaacaacagcaacagcaacagcagcagcaggcggcccATCCTCATCATATGCAGCCGCACAAGTCCGGTTTCGGTGCCAGTTCCATGCCAGCGGCCAGCGCCGCCTCCGCCTCGCATCATCAGCTGAGTGCTGGTCATGTGGACAAGTCAAAGTCCAAGAACAGCCCGCTGAGGAGCGAAACGCCGCGCCTGCACTCGCCCCTGGCCGAGCTGGGCCTAGAGATGACCTACAAGCGGGAGTACTCGCCGACGAGACTCTTTGCCGAGGATCTAGCCGATTTGGTGGGAGCCAGTGCTGCCGGCGTCTCTTCCACAAGCTCCGTCAGCACGGCGACGACAGCAGCGCCTGTAGCTACCAGTGGCGCTGGGGCAGCCAACACGGACATCAGCtccagcggcagcggcatcaAGGTGGAACCCATCGCCACCAGCAGCGAGTAG
- Protein Sequence
- MMENSHAWMGATGSTLAADSYQYQLQSMWQKCWNTNQNLMHHMRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGPDLRPKGRGRPQRILLGIWPDEHIKGVIKTVVFRDAKDIKDDSLGSHMPPYGRHSPVFPLQDMTLSYPGASGAMPGSGLSALACPNGMGSGGGGGGAGGVGSGAPGGGVADQQMSQETAAAVAAVAHNIRQQMQMAAAVQHQHSEAGPPPGLFNLPPHLTGGPGRGSISPALSSGSGPRHAPSPCGPAGLLPNLPPSMAVALHRDHLQQLQLQQQHALHQQQQQQQQQQQQQQQQQQQQQAAHPHHMQPHKSGFGASSMPAASAASASHHQLSAGHVDKSKSKNSPLRSETPRLHSPLAELGLEMTYKREYSPTRLFAEDLADLVGASAAGVSSTSSVSTATTAAPVATSGAGAANTDISSSGSGIKVEPIATSSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00359382;
- 90% Identity
- -
- 80% Identity
- -