Hdun015800.1
Basic Information
- Insect
- Hirtodrosophila duncani
- Gene Symbol
- -
- Assembly
- GCA_037043425.1
- Location
- JBAMBM010000821.1:476496-478112[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 4.6e-17 9.3e-14 51.0 0.0 2 44 349 391 348 392 0.96 2 3 0.021 43 4.1 0.0 27 37 421 431 417 436 0.89 3 3 2.2e-20 4.3e-17 61.7 0.0 2 41 458 497 457 499 0.96
Sequence Information
- Coding Sequence
- ATGGGTCACTCGGCGACTATAATGGAGATACAGCGGACGCTGCGCAATGACAGACAGGCTTGCGAAGTAGTTCTGGCAGCCAAGGATGGTGTTAGTGTGCGTGCCCATTTGTTTGTGCTTAGTTCTTGCAGCGATCTGATGCGAAATCTACTGGTCGATGTCTCTCCCGGAGTGGAGACGACCATTATATTGCCTGATATACGCGGTGAGATGCTAGAATGCATGCTGACGTTTATTTATATGGGCGAGACCAACCTGCTTTCGTCAGCGCTGCCAGAATTTTTGGAGGCCATCCATTTGTTGGGTATCAAGTCGGCCATtagttttgaatgcaatccAGCGTCTCAGCTAAGCACATCCAACGTAGACAGCGCTCTCACTGTGGAGGCAGCCAAATCCATAGCCGGTCTGCAAATTGCTCATTCCGAGTTATTGGAGGAGGAAGTTGACGCGGTGGCAAATGAAATTCTGCCAGATGACCACCATCAAGAGCAGCAGGAAGTAGGGCAGGCAACGCGAGCAATAGAATTCCTTGATGTCTACCAGGATCAGCCAAAGATTACGTACTCCATTGAACATATGGAAGGCACGACAAGTGGTAATCAGTTCATACTGACCGAAAACACGGGCACCTTTACTATCACCCAGTCGGCAGCGTCCCTCTCCAAATTAACCACGCCCAGCGGCAATGTTACCAATGTCAGTGGTGAAATGGCTGACGAGGAAGCCGAAGCTGATGTTACGGAGGAACTTGAGCACGAGTCGCAGCTAATCGAAGAGGAGTATGCCACACCGACAGGACACGACATTGCAGAGCTGCCCACAGGCACGGACGTAGAgctggaagaagaagaagccgaGGAGGAAAGCATCCACATGCAGGAGGACGAACCCGAACCCGACGAGGAAATGCTGGATGTGAAAGCCCGCTATGTCAAAGCAAGAGCCGGACGCCGCCCAACGAAATTAAAAACTGGCAGGAAGCCAAGCGTTAAGCGCCAGCCACAGTATATGGAGCTCAAGAGTGAGTTAAGGGATGGCATCAACGATGCCCTCGAATTGGCAGCGGAAGCAGTGCTCAATGAACGACTCAGCTTGCAGAAGGCGGCCGACCGTTATGACATATCGAAGACCGTCCTGTGGCGTCGGGTGCGCACTAATCCCGACTACATGGGCAACCAACGCGAGAAACCATCACTGTCGGAGGCTTATGCGCGTCTCAAGAACGGCGACTCGCTGAAGAGCATCAGCCAAGATCTAAATATACCCATGTCAACGTTGCACCGCCACAAAGTTCGACTGGCTGCCCAGGGTCGCCTGCCCGATCATGTGGCATTTCGCCGACGAGACACCACCCCCAAGGATGAGCTCCGTGATAAGCTGGCCAAGGCTGTGCATGCCTGCATCAATGGCGGCATGTCCCAGAACCATGCAGCGAATCTTTTCGAGATCCCCAAGAGCACACTCTGGCGCCACTTGCAGCGCCGAGTGGCTGAAGCGGAGCGCAAGATCAAAGAGGAACGCGAtaacgatgatgacgacgacgaagaAGATGATGAGGAAGAGGTCACCGATCCAGGCCAGAGAGGCCgaaaattgaaagtgaacAGATATTGA
- Protein Sequence
- MGHSATIMEIQRTLRNDRQACEVVLAAKDGVSVRAHLFVLSSCSDLMRNLLVDVSPGVETTIILPDIRGEMLECMLTFIYMGETNLLSSALPEFLEAIHLLGIKSAISFECNPASQLSTSNVDSALTVEAAKSIAGLQIAHSELLEEEVDAVANEILPDDHHQEQQEVGQATRAIEFLDVYQDQPKITYSIEHMEGTTSGNQFILTENTGTFTITQSAASLSKLTTPSGNVTNVSGEMADEEAEADVTEELEHESQLIEEEYATPTGHDIAELPTGTDVELEEEEAEEESIHMQEDEPEPDEEMLDVKARYVKARAGRRPTKLKTGRKPSVKRQPQYMELKSELRDGINDALELAAEAVLNERLSLQKAADRYDISKTVLWRRVRTNPDYMGNQREKPSLSEAYARLKNGDSLKSISQDLNIPMSTLHRHKVRLAAQGRLPDHVAFRRRDTTPKDELRDKLAKAVHACINGGMSQNHAANLFEIPKSTLWRHLQRRVAEAERKIKEERDNDDDDDEEDDEEEVTDPGQRGRKLKVNRY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00804505;
- 90% Identity
- iTF_00804505;
- 80% Identity
- iTF_00804505;