Hdun014088.1
Basic Information
- Insect
- Hirtodrosophila duncani
- Gene Symbol
- retn
- Assembly
- GCA_037043425.1
- Location
- JBAMBM010000806.1:4256518-4268317[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.2e-26 5.6e-23 81.3 0.0 2 89 20 105 19 105 0.96 2 3 0.47 1.2e+03 0.1 0.4 3 16 251 264 191 290 0.58 3 3 0.43 1.1e+03 0.2 0.1 3 39 251 289 248 305 0.64
Sequence Information
- Coding Sequence
- ATGCTGATATCCGAGGATCAAATCCAGGAGCTCTATGAAATCAATGATGATCCCAAGCGCAAGGAGTTTCTGGATGATTTGTTTTCGTTTATGCAAAAGCGCGGCACACCAATTAACCGACTGCCCATAATGGCCAAATCGGTATTGGATCTATATGAGCTATATAATTTGGTGATAGCACGCGGCGGTCTTGTCGATGTGATCAACAAGAAACTCTGGCAGGAGATCATCAAGGGACTGCATCTGCCATCCAGCATCACCAGTGCTGCATTCACCCTGCGCACCCAATACATGAAGTATCTTTACCCATATGAATGCGAGAAGAAGAATCTGAGTACACCGGCCGAGCTACAGGCGGCCATTGATGGTAATCGTCGCGAAGGACGTCGCTCCAGCTATGGCCAGTACGAGGCCATGCACAACCAGATGCCATTGACGCCCATCTCGCGTCCATCGCTGCCGGGTAGCCTGCAGCAAATGTCGCCCCTGGCATTGGTCACTCATGCGGCCAACAATCAACAGGcccaggcagcggcagcagcagcagccgctcaTCGTCGACTGATGGGTGCCCCGGCATTCGGTCAGATGCCCAATTTGGTCACCCAAGAGATTGAGAATCGCATGATGGAGTATCTGCAGCTCATACAGGCTAAGAAAGAACAACAGGGTGTGGGCGCTGTCACGCCTATTATGGGTCATCCCcatcaccagcaacagcagcaccaccaatcagcccagcaacaacagcaacatctccaccagcagcagcaacagcatcaccAGCGACAGCGTTCCCAGAGCCCCGAAATGAGCACACGAGAGGCGCTTAGCGCTCAGGTGGCCCTGTGGCATATGtaccacaataacaacagtcCACCGGGATCTGCTCACACCTCACCACAGCAACGCGAAGCATTGAACCTCTCCGAGTCACCGCCAAATCTCACCAACATTAAACGTGAACGAGAACGTGATCCAAGTCCCGAGCCCATAGACCATGACCAGGACGATAAGCCTCATCTGCCACCGCCAGCCAAACGTGTGGGGAGCGGCCTAATGCCAGCCGGTTTTCCAGCCAACTTCTATTTGAGTCCCCATAACATGGCCGCTGTGGCAGCAGCGGCCAGCTTCCATCACCAGGCCAgctccaacagcaacagccatcAGCAGGATGCTGCTTCCGAGGGCGAACCGGAGGCCGATGGCGAGGATGAGTATGGCAATGGGGAGCACAACACAACGGGCAACTCATCGTCCATGCACGATGACAGTGAACCACAGCAGTTGAATGgacaccatcatcatcatcatcagaatCATCTGGACAAGTCCGATGATTCAGCCATAGAGAATTCGCCCAGCACATCCACAACGGCGTCGGGTTCGGGCGGTCATCGTCACAGTTCGCCCGTGTCGACCAAGAAAAAGACAAATGGCAAGACTAATTCGAGCAGCTCGAAGGAAGGGCAGACGGTAAACAGTGCAACGAATGCATTGGACACGCTCAGTCTGCTGTCGGGCATGCAGTTTCAAGTGGCACGCAATGGCACTGGAGAGAATGGCGAACAACAGCTCATGGTCAATCTTCAGTTGAATGGCATCAAGTACTCTGGTATTTTGGTGGCCAACGCTGCCCCAAGTGTGAATCAAGAACAGAGCGAGGAGAACAGCAGCTCCCAGCCCCAGCCAGCGGAAGCGGAAAGCAATGCTGAGGCGGAAGATGAAACTGCAGCAGAtaagacagcaacagcaacagttgaGGAAACAGAACGGGATGCAGATACGGATACGGATACCATTGTGAATGGTGGCAGTGAaggcggcggtggcagtggCTCAGTGGGTGTGGTCCCGATGTCCCTCTTAAAGGATGCAGTGATTAGTTCatag
- Protein Sequence
- MLISEDQIQELYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPLTPISRPSLPGSLQQMSPLALVTHAANNQQAQAAAAAAAAHRRLMGAPAFGQMPNLVTQEIENRMMEYLQLIQAKKEQQGVGAVTPIMGHPHHQQQQHHQSAQQQQQHLHQQQQQHHQRQRSQSPEMSTREALSAQVALWHMYHNNNSPPGSAHTSPQQREALNLSESPPNLTNIKRERERDPSPEPIDHDQDDKPHLPPPAKRVGSGLMPAGFPANFYLSPHNMAAVAAAASFHHQASSNSNSHQQDAASEGEPEADGEDEYGNGEHNTTGNSSSMHDDSEPQQLNGHHHHHHQNHLDKSDDSAIENSPSTSTTASGSGGHRHSSPVSTKKKTNGKTNSSSSKEGQTVNSATNALDTLSLLSGMQFQVARNGTGENGEQQLMVNLQLNGIKYSGILVANAAPSVNQEQSEENSSSQPQPAEAESNAEAEDETAADKTATATVEETERDADTDTDTIVNGGSEGGGGSGSVGVVPMSLLKDAVISS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -