Hcon017696.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Hirtodrosophila confusa
Gene Symbol
NFXL2
Assembly
GCA_035043065.1
Location
JAWNNI010000213.1:3420265-3423570[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 2 2.5e+04 -8.1 6.4 15 19 143 147 142 147 0.82
2 20 0.13 1.6e+03 -0.3 0.4 4 10 178 184 177 184 0.95
3 20 6.4e-08 0.0008 19.8 15.5 1 18 192 208 192 209 0.98
4 20 1.8 2.3e+04 -4.0 0.1 13 15 222 224 221 225 0.75
5 20 4.7e-07 0.0059 17.1 15.6 1 19 245 264 245 264 0.98
6 20 1.1 1.4e+04 -3.3 0.6 5 10 288 293 288 293 0.92
7 20 1.2e-07 0.0015 19.0 15.3 1 19 299 318 299 318 0.96
8 20 0.87 1.1e+04 -3.0 0.5 1 7 342 347 341 349 0.49
9 20 1e-07 0.0013 19.2 12.0 1 18 352 369 352 370 0.96
10 20 0.69 8.6e+03 -2.6 0.4 1 5 379 383 379 388 0.73
11 20 2 2.5e+04 -4.9 2.3 5 10 393 398 393 398 0.91
12 20 0.00035 4.4 7.9 17.2 1 18 404 421 404 422 0.97
13 20 4.3e-08 0.00054 20.4 14.7 1 18 431 448 425 449 0.90
14 20 0.36 4.5e+03 -1.7 1.1 6 10 477 481 476 481 0.92
15 20 7.3e-05 0.92 10.1 8.2 10 18 495 503 492 504 0.91
16 20 0.011 1.3e+02 3.2 5.6 1 11 516 525 516 526 0.95
17 20 0.85 1.1e+04 -2.9 1.4 6 10 576 580 575 580 0.88
18 20 3.1e-05 0.39 11.2 3.2 1 11 586 596 586 597 0.95
19 20 0.084 1e+03 0.3 13.6 4 18 627 641 625 642 0.94
20 20 1.5e-06 0.019 15.4 11.6 1 17 693 708 693 712 0.95

Sequence Information

Coding Sequence
ATGGAAAAGTTCAATAAAGAGCAAGCTAAGAATTTAGCAGCCGCAAAGAAACTTGTGAATGCATACGCCTCCAGTTCGGAGGATGAGGGCGAACTGGATGAAAAGCATATTCTGGATCAATTGTACAAGAATTACCAGGACACGTCCGTTGACAATGTGAACCGCACAACTACATTCCTGGAGAACGCGCTGCACTCGGGTGCGGCAACATGTCTGATTTGCATTCGTAGCATACGACGTGTGGAGTCCATATGGAGCTGCAAgagctgcttctgcttctttcATCTGAACTGCATCCAGCGCTGGGCTAATGATAGCGTCCAGCAGATGAAAGTCAAGGCGGAGCAGCAAAACAGCAACCAGGGCCACTACAATCATCTGGGCGAGTTTGTGCCGCCCAAGCGCCACAAATCGCTGCACTGGTGCTGCCCACAGTGTCGCCGAGACTACCAGCCGGCAGAGCGTCCCACACAGTATGATTGCTTCTGCGGCAAGGAACTCAATCCGCAGCCACAGTCATTTCTTGTGCCGCACTCCTGCGGCGAGATCTGTGGCAAGCTATTGCAGCCAGAGTGCGGCCATGACTGCAAGCTCCTCTGTCATCCCGGCCCGTGTCCACCCTGCGCACAGTCGACGTTTACCCATTGTCTGTGCCGTAGCACAGGGCCATGCGCGATGCGCTGCATCGACAAGTACTGGCAGTGCACGAAAAAGTGCCAAGCGCGTTTGTCCTGTGGCAAGCACGTGTGCAAGCAAGCTTGCCATCGACCTGGCCAGTGCCCACCTTGCAGCGGAAAGAGCTCCCACCATTGCGATTGCAAACGGGAGCTTAAAGTTGTCAAGTGCTCGGAGCCCAAATGGAAGTGTAACAATATTTGTGGCGCTGCCTTTGATTGTGGCCTGCATAACTGCGACAAGGTCTGCCACAAGGGTCCTTGCGGTGGAGAATGTCCCTTGCGCGTGAACAGCTGTCCATGTGGCAAGAGCAGCAGAGCAGCCAAATGCAATGAGCTAATTGAAACCTGTGGCGATACCTGCCAAAAGCTGTTGGCCTGCGGCAAGCATACATGTCCGCAACGCTGTCATCGTGGTGCTTGCAATTTGTGCCTGGTGCGTACCAAGAAAAAGTGCCGATGCGGGCTGCATGAAAAGGAGCTGCCCTGCTCGAAGGAGTTCACCTGCGAAACAAAGTGCAAACAGACGCGTGATTGCGGCAAGCATGCCTGCAACCGCAAGTGTTGTGGCGATCAGTGTCCGCCCTGCGAGAAGATCTGCGGCAAGCAGCTAAACTGCAACAAGCACAAATGCCAGTCGGTTTGCCACAATGGGCCCTGTTATCCCTGTGAATCGGAGTCCCAGGTGAACTGTCGCTGCGGCAAGACGCGTCGCAGCGTGCCCTGTGGACGGGAAAAGAGAGTGCGCATTGCTTGCCAGGAGCTCTGCCGCGTTACGGCAAAATGTCATCACGCCGTCAATCATCGTTGCCACAAAGGAGACTGTCCGCCTTGTGGTCAGCCATGTGGCTTGCCCAATAATACCAGCGGCTGTGGACACATTTGCAAAGCACGCTGCCACGCCGCCATACGTTCGCAAAAGCCAGCAGTGAACACTGTCACAGAGTATCGCGCGTTACCGCATCCACGTTGTGATGAGGGCGTTAGTGTCACTTGTATTGGCGGCCATGAGGTAGCCACCTGGCCTTGCTGGAACTCTAAGCCATCCTCCTGCCAGCGCAAATGCGGGCGCGAATTGAAATGTAGCAACCACAGATGTGACCTGGTTTGTCATGCTGTGCCCAAGCCGCAGGACATGCAGCAGCAAGTCGGCTGTGCCAATTGCGAACAAGGATGCGCGATTGCTCGACCTGCAGGCTGTGTGCATGCCTGTGCCCGTGGCTGCCATCCGCCGCCCTGTGCGTCATGTGGCTTTATCATCAAGAGCAAGTGCCACTGCAGCCTCAATCAGGTTGTTTATAAGTGCAGCGAGTTCTTTAATGAAGTGGGCACCGTTGAGGAGATTGTGGAACGCCGTGAGAAGCTGCGTAGCTGTGGCAATCGTTGTATGAAGAATTTTGCCTGTGGCCATCGCTGCATGACCATATGCCACCCCGGGAACTGCCCCAGTCCCGAGCTGTGCCGCAAAAAGGTGCGCATTTTCTGTGCCTGCAAGCGAATCAAGCTGGACATAGCCTGCGACAAGCATCGTGCGGGTCAAATATCATTGGACTGCGATGACAACTGCCTCACTGAGCGCTCAAAGGCCGAGGcaacagagcagcagcagctgcaacgaAAACTGCGCCAGGAGGAGGAAAAGAATCGCCTAGAGCTTGAGAAATTCGAGCAAAAGTTTGGCAAGCGTAAGCCCAAGGAACGCAAAGCTGTCGACGTTGtgcaaaacaaagcaaacataGATTGGATGCGTTTGGCCATCTATGCGGCATCCTTGCTGGTAGTGCTTGGCGCTCTGGCCGTGGCTTACTACTCAGATAACTAA
Protein Sequence
MEKFNKEQAKNLAAAKKLVNAYASSSEDEGELDEKHILDQLYKNYQDTSVDNVNRTTTFLENALHSGAATCLICIRSIRRVESIWSCKSCFCFFHLNCIQRWANDSVQQMKVKAEQQNSNQGHYNHLGEFVPPKRHKSLHWCCPQCRRDYQPAERPTQYDCFCGKELNPQPQSFLVPHSCGEICGKLLQPECGHDCKLLCHPGPCPPCAQSTFTHCLCRSTGPCAMRCIDKYWQCTKKCQARLSCGKHVCKQACHRPGQCPPCSGKSSHHCDCKRELKVVKCSEPKWKCNNICGAAFDCGLHNCDKVCHKGPCGGECPLRVNSCPCGKSSRAAKCNELIETCGDTCQKLLACGKHTCPQRCHRGACNLCLVRTKKKCRCGLHEKELPCSKEFTCETKCKQTRDCGKHACNRKCCGDQCPPCEKICGKQLNCNKHKCQSVCHNGPCYPCESESQVNCRCGKTRRSVPCGREKRVRIACQELCRVTAKCHHAVNHRCHKGDCPPCGQPCGLPNNTSGCGHICKARCHAAIRSQKPAVNTVTEYRALPHPRCDEGVSVTCIGGHEVATWPCWNSKPSSCQRKCGRELKCSNHRCDLVCHAVPKPQDMQQQVGCANCEQGCAIARPAGCVHACARGCHPPPCASCGFIIKSKCHCSLNQVVYKCSEFFNEVGTVEEIVERREKLRSCGNRCMKNFACGHRCMTICHPGNCPSPELCRKKVRIFCACKRIKLDIACDKHRAGQISLDCDDNCLTERSKAEATEQQQLQRKLRQEEEKNRLELEKFEQKFGKRKPKERKAVDVVQNKANIDWMRLAIYAASLLVVLGALAVAYYSDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01324578;
90% Identity
iTF_00805651;
80% Identity
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